Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003893 Daucus carota HOM05D000625 ORTHO05D000467 6.9e-162 573.9 293 100.0
DCAR_003894 Daucus carota HOM05D000625 ORTHO05D000467 4.3e-55 219.2 368 43.5
Dinv32215 Davidia involucrata HOM05D000625 ORTHO05D000467 2.3e-32 143.7 399 32.8
Dinv21525 Davidia involucrata HOM05D000625 ORTHO05D000467 2.5e-31 140.2 399 32.6
ClCG01G024870 Citrullus lanatus HOM05D000625 ORTHO05D000467 2.9e-27 126.7 391 31.2
DCAR_004817 Daucus carota HOM05D000625 ORTHO05D000467 3.0e-24 116.7 357 33.3
MELO3C007108.2 Cucumis melo HOM05D000625 ORTHO05D000467 8.7e-24 115.2 393 29.8
CsaV3_6G051990 Cucumis sativus L. HOM05D000625 ORTHO05D000467 5.7e-23 112.5 393 29.3
GSVIVG01021545001 Vitis vinifera HOM05D000625 ORTHO05D000467 5.7e-23 112.5 401 30.4
Sed0014179 Sechium edule HOM05D000625 ORTHO05D000467 8.2e-22 108.6 388 30.2
Lj4g0003152 Lotus japonicus HOM05D000625 ORTHO05D000467 1.8e-21 107.5 370 32.4
Ciclev10015036m.g Citrus clementina HOM05D000625 ORTHO05D000467 2.4e-21 107.1 384 29.7
Hma1.2p1_0594F.1_g185990 Hydrangea macrophylla HOM05D000625 ORTHO05D000467 2.4e-21 107.1 388 32.2
Rhsim13G0117200 Rhododendron simsii HOM05D000625 ORTHO05D000467 2.4e-21 107.1 385 29.1
Actinidia13444 Actinidia chinensis HOM05D000625 ORTHO05D000467 5.3e-21 105.9 374 28.9
Actinidia07465 Actinidia chinensis HOM05D000625 ORTHO05D000467 6.9e-21 105.5 364 28.8
Gohir.D05G148800 Gossypium hirsutum HOM05D000625 ORTHO05D000467 6.9e-21 105.5 399 31.1
Phvul.009G213200 Phaseolus vulgaris HOM05D000625 ORTHO05D000467 6.9e-21 105.5 371 29.6
TAR629G2522 Trochodendron aralioides HOM05D000625 ORTHO05D000467 9.0e-21 105.1 422 29.4
arahy.Tifrunner.gnm1.ann1.FF7LJT Arachis hypogaea HOM05D000625 ORTHO05D000467 2.0e-20 104.0 351 34.2
arahy.Tifrunner.gnm1.ann1.RJ5V20 Arachis hypogaea HOM05D000625 ORTHO05D000467 2.0e-20 104.0 351 34.2
Duzib235G0761 Durio zibethinus HOM05D000625 ORTHO05D000467 2.0e-20 104.0 410 33.4
Haze_05659 Corylus avellana HOM05D000625 ORTHO05D000467 2.6e-20 103.6 394 29.7
TAR626G1770 Trochodendron aralioides HOM05D000625 ORTHO05D000467 2.6e-20 103.6 322 30.1
TWI09G0936 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 4.5e-20 102.8 401 28.4
arahy.Tifrunner.gnm1.ann1.J3VXKJ Arachis hypogaea HOM05D000625 ORTHO05D000467 7.7e-20 102.1 351 33.6
TAR704G0001 Trochodendron aralioides HOM05D000625 ORTHO05D000467 7.7e-20 102.1 428 27.3
Cfa000902 Carpinus fangiana HOM05D000625 ORTHO05D000467 1.0e-19 101.7 393 28.5
Potri.011G081500 Populus trichocarpa HOM05D000625 ORTHO05D000467 1.3e-19 101.3 405 27.4
MSTRG.14786 Avicennia marina HOM05D000625 ORTHO05D000467 2.2e-19 100.5 387 30.5
Gohir.A05G146400 Gossypium hirsutum HOM05D000625 ORTHO05D000467 2.2e-19 100.5 399 30.6
Thecc.06G144600 Theobroma cacao HOM05D000625 ORTHO05D000467 2.2e-19 100.5 404 32.2
Gorai.009G152900 Gossypium raimondii HOM05D000625 ORTHO05D000467 2.9e-19 100.1 401 30.9
TWI73G1040 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 2.9e-19 100.1 401 27.9
QL05p055155 Quercus lobata HOM05D000625 ORTHO05D000467 3.8e-19 99.8 393 26.7
Ca_02598_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 5.0e-19 99.4 370 30.0
Nn4g26634 Nelumbo nucifera HOM05D000625 ORTHO05D000467 8.5e-19 98.6 426 28.4
Glyma.09G089500 Glycine max HOM05D000625 ORTHO05D000467 1.1e-18 98.2 361 28.8
VMungo1309G1421 Vigna mungo HOM05D000625 ORTHO05D000467 1.4e-18 97.8 374 29.1
Peaxi162Scf00465g00819 Petunia axillaris HOM05D000625 ORTHO05D000467 2.5e-18 97.1 406 27.1
PGR083G0357 Punica granatum HOM05D000625 ORTHO05D000467 3.2e-18 96.7 375 27.7
Lalb_Chr23g0275921 Lupinus albus HOM05D000625 ORTHO05D000467 5.5e-18 95.9 343 32.4
Prupe.4G085400 Prunus persica HOM05D000625 ORTHO05D000467 5.5e-18 95.9 416 27.2
Cc03_g08810 Coffea canephora HOM05D000625 ORTHO05D000467 7.2e-18 95.5 402 27.6
Manes.17G074100 Manihot esculenta HOM05D000625 ORTHO05D000467 7.2e-18 95.5 393 28.8
Oeu030961.1 Olea europaea HOM05D000625 ORTHO05D000467 9.4e-18 95.1 392 27.3
FvH4_3g05060 Fragaria vesca HOM05D000625 ORTHO05D000467 1.2e-17 94.7 379 29.3
Manes.15G124900 Manihot esculenta HOM05D000625 ORTHO05D000467 1.2e-17 94.7 394 28.2
Medtr2g049770 Medicago truncatula HOM05D000625 ORTHO05D000467 1.2e-17 94.7 343 29.2
Glyma.08G231500 Glycine max HOM05D000625 ORTHO05D000467 2.1e-17 94.0 369 27.9
Migut.M00882 Erythranthe guttata HOM05D000625 ORTHO05D000467 2.7e-17 93.6 377 28.9
Lsat_1_v5_gn_7_27500 Lactuca sativa HOM05D000625 ORTHO05D000467 3.6e-17 93.2 416 28.6
arahy.Tifrunner.gnm1.ann1.G0QL0C Arachis hypogaea HOM05D000625 ORTHO05D000467 4.6e-17 92.8 388 28.9
Eucgr.D00271 Eucalyptus grandis HOM05D000625 ORTHO05D000467 4.6e-17 92.8 392 27.8
RcHm_v2.0_Chr5g0014901 Rosa chinensis HOM05D000625 ORTHO05D000467 4.6e-17 92.8 388 26.8
Duzib192G0574 Durio zibethinus HOM05D000625 ORTHO05D000467 6.1e-17 92.4 405 30.6
CiPaw.09G119900 Carya illinoinensis HOM05D000625 ORTHO05D000467 1.4e-16 91.3 407 27.5
FAN16G3061 Fragaria x ananassa HOM05D000625 ORTHO05D000467 1.4e-16 91.3 387 28.4
HanXRQChr04g0116591 Helianthus annuus HOM05D000625 ORTHO05D000467 1.4e-16 91.3 400 31.0
MD05G1279900 Malus domestica HOM05D000625 ORTHO05D000467 3.0e-16 90.1 395 28.6
Cpa.g.sc17.48 Carica papaya HOM05D000625 ORTHO05D000467 5.1e-16 89.4 372 28.8
Glyma.15G197100 Glycine max HOM05D000625 ORTHO05D000467 5.1e-16 89.4 381 28.6
vmacro03434 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 5.1e-16 89.4 433 27.0
Nn3g20338 Nelumbo nucifera HOM05D000625 ORTHO05D000467 6.7e-16 89.0 402 25.9
Psat1g020720 Pisum sativum HOM05D000625 ORTHO05D000467 6.7e-16 89.0 368 28.5
Phvul.002G178100 Phaseolus vulgaris HOM05D000625 ORTHO05D000467 1.1e-15 88.2 382 29.1
Glyma.05G143200 Glycine max HOM05D000625 ORTHO05D000467 1.5e-15 87.8 369 29.3
Glyma.08G099600 Glycine max HOM05D000625 ORTHO05D000467 2.0e-15 87.4 397 27.0
MD10G1258400 Malus domestica HOM05D000625 ORTHO05D000467 2.0e-15 87.4 387 27.4
Psat7g080520 Pisum sativum HOM05D000625 ORTHO05D000467 2.0e-15 87.4 346 26.9
ECA236G4706 Erigeron canadensis HOM05D000625 ORTHO05D000467 2.5e-15 87.0 394 27.9
arahy.Tifrunner.gnm1.ann1.W5QJNA Arachis hypogaea HOM05D000625 ORTHO05D000467 3.3e-15 86.7 374 27.5
FAN21G0939 Fragaria x ananassa HOM05D000625 ORTHO05D000467 5.7e-15 85.9 394 27.9
SalBow8G3181 Salvia bowleyana HOM05D000625 ORTHO05D000467 5.7e-15 85.9 365 27.9
FAN25G3819 Fragaria x ananassa HOM05D000625 ORTHO05D000467 9.7e-15 85.1 389 26.2
Sabra04G0085000 Salix brachista HOM05D000625 ORTHO05D000467 1.3e-14 84.7 382 30.4
TPR.G9564 Trifolium pratense HOM05D000625 ORTHO05D000467 1.3e-14 84.7 347 28.2
Sed0027919 Sechium edule HOM05D000625 ORTHO05D000467 2.2e-14 84.0 384 26.8
Lalb_Chr07g0187501 Lupinus albus HOM05D000625 ORTHO05D000467 2.8e-14 83.6 314 29.9
MBI18_g11222_MAGBIO Magnolia biondii HOM05D000625 ORTHO05D000467 3.7e-14 83.2 401 26.4
Atru.chr10.1090 Acer truncatum HOM05D000625 ORTHO05D000467 4.8e-14 82.8 320 30.6
ClCG03G006510 Citrullus lanatus HOM05D000625 ORTHO05D000467 6.3e-14 82.4 386 26.4
VMungo0251G1602 Vigna mungo HOM05D000625 ORTHO05D000467 1.1e-13 81.6 379 27.4
C03p76620 Brassica napus HOM05D000625 ORTHO05D000467 1.4e-13 81.3 343 29.2
BcaB03g13837 Brassica carinata HOM05D000625 ORTHO05D000467 1.8e-13 80.9 346 28.3
TPR.G31226 Trifolium pratense HOM05D000625 ORTHO05D000467 2.4e-13 80.5 374 27.3
BcaB03g12207 Brassica carinata HOM05D000625 ORTHO05D000467 4.1e-13 79.7 339 29.5
MELO3C002769.2 Cucumis melo HOM05D000625 ORTHO05D000467 5.3e-13 79.3 367 27.0
Medtr8g079472 Medicago truncatula HOM05D000625 ORTHO05D000467 5.3e-13 79.3 354 26.8
MSTRG.7510 Avicennia marina HOM05D000625 ORTHO05D000467 6.9e-13 79.0 371 28.0
Sc17g0004800 Simmondsia chinensis HOM05D000625 ORTHO05D000467 9.1e-13 78.6 386 27.5
Ca_18161_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 1.2e-12 78.2 369 27.4
Lj6g0026443 Lotus japonicus HOM05D000625 ORTHO05D000467 1.5e-12 77.8 383 26.6
FAN11G1753 Fragaria x ananassa HOM05D000625 ORTHO05D000467 2.6e-12 77.0 414 26.8
Sabra11G0065200 Salix brachista HOM05D000625 ORTHO05D000467 3.4e-12 76.6 315 27.9
BcaB07g32627 Brassica carinata HOM05D000625 ORTHO05D000467 5.9e-12 75.9 340 30.9
BraA08t34410Z Brassica rapa HOM05D000625 ORTHO05D000467 7.7e-12 75.5 329 29.8
CANSAT35G1452 Cannabis sativa HOM05D000625 ORTHO05D000467 1.3e-11 74.7 449 27.4
CARHR029670 Cardamine hirsuta HOM05D000625 ORTHO05D000467 1.3e-11 74.7 362 29.0
CDE02G0202 Ceratophyllum demersum HOM05D000625 ORTHO05D000467 1.3e-11 74.7 413 26.4
A07p09990 Brassica napus HOM05D000625 ORTHO05D000467 1.7e-11 74.3 336 30.1
C07p15270 Brassica napus HOM05D000625 ORTHO05D000467 1.7e-11 74.3 339 28.9
Carub.0001s2851 Capsella rubella HOM05D000625 ORTHO05D000467 1.7e-11 74.3 369 28.5
CDE05G1731 Ceratophyllum demersum HOM05D000625 ORTHO05D000467 1.7e-11 74.3 400 24.5
BcaC06g35499 Brassica carinata HOM05D000625 ORTHO05D000467 2.2e-11 73.9 339 28.6
EL10Ac8g19628 Beta vulgaris HOM05D000625 ORTHO05D000467 2.9e-11 73.6 150 34.0
A08p24540 Brassica napus HOM05D000625 ORTHO05D000467 5.0e-11 72.8 328 29.3
BolC7t42030H Brassica oleracea HOM05D000625 ORTHO05D000467 5.0e-11 72.8 339 28.6
Gohir.A06G196200 Gossypium hirsutum HOM05D000625 ORTHO05D000467 8.5e-11 72.0 366 27.9
BraA07t28791Z Brassica rapa HOM05D000625 ORTHO05D000467 1.1e-10 71.6 337 31.2
COL.COLO4_31012 Corchorus olitorius HOM05D000625 ORTHO05D000467 1.1e-10 71.6 161 37.3
Gorai.010G237600 Gossypium raimondii HOM05D000625 ORTHO05D000467 1.1e-10 71.6 355 27.6
AUR62030136 Chenopodium quinoa HOM05D000625 ORTHO05D000467 2.5e-10 70.5 162 32.1
Thhalv10007605m.g Eutrema salsugineum HOM05D000625 ORTHO05D000467 2.5e-10 70.5 359 28.7
SalBow7G2185 Salvia bowleyana HOM05D000625 ORTHO05D000467 4.2e-10 69.7 336 25.9
Duzib160G0084 Durio zibethinus HOM05D000625 ORTHO05D000467 5.5e-10 69.3 340 29.4
Migut.H01348 Erythranthe guttata HOM05D000625 ORTHO05D000467 5.5e-10 69.3 356 25.3
Sed0010534 Sechium edule HOM05D000625 ORTHO05D000467 5.5e-10 69.3 385 26.5
AUR62002681 Chenopodium quinoa HOM05D000625 ORTHO05D000467 7.2e-10 68.9 146 33.6
Gohir.D06G203700 Gossypium hirsutum HOM05D000625 ORTHO05D000467 9.4e-10 68.6 360 27.5
BolC5t31645H Brassica oleracea HOM05D000625 ORTHO05D000467 1.6e-09 67.8 291 31.3
SalBow7G4302 Salvia bowleyana HOM05D000625 ORTHO05D000467 1.6e-09 67.8 338 26.0
Sp1g26120 Schrenkiella parvula HOM05D000625 ORTHO05D000467 2.1e-09 67.4 363 27.3
Nitab4.5_0004752g0010 Nicotiana tabacum HOM05D000625 ORTHO05D000467 4.7e-09 66.2 339 28.9
BcaC01g00181 Brassica carinata HOM05D000625 ORTHO05D000467 1.4e-08 64.7 339 26.3
BolC3t19921H Brassica oleracea HOM05D000625 ORTHO05D000467 1.4e-08 64.7 339 26.3
BcaB07g32634 Brassica carinata HOM05D000625 ORTHO05D000467 3.9e-08 63.2 344 27.0
THA.LOC104820660 Tarenaya hassleriana HOM05D000625 ORTHO05D000467 6.7e-08 62.4 383 29.5
Aa31LG6G5480 Aethionema arabicum HOM05D000625 ORTHO05D000467 8.8e-08 62.0 358 27.7
A09p36210 Brassica napus HOM05D000625 ORTHO05D000467 1.1e-07 61.6 343 26.8
BraA09t39148Z Brassica rapa HOM05D000625 ORTHO05D000467 2.0e-07 60.8 341 27.9
MSTRG.16264 Avicennia marina HOM05D000625 ORTHO05D000467 2.6e-07 60.5 317 28.4
HPP92_028168 Vanilla planifolia HOM05D005567 ORTHO05D005651 3.3e-07 60.1 169 32.5
Hund21551 Selenicereus undatus HOM05D000625 ORTHO05D000467 5.7e-07 59.3 165 32.1
Aqoxy1G01660 Aquilegia oxysepala HOM05D000625 ORTHO05D000467 9.7e-07 58.5 194 28.4
BcaC05g27057 Brassica carinata HOM05D000625 ORTHO05D000467 1.7e-06 57.8 275 28.4
Nitab4.5_0001930g0030 Nicotiana tabacum HOM05D000625 ORTHO05D000467 4.8e-06 56.2 316 26.9
Lj2C322G11 Lonicera japonica HOM05D000625 ORTHO05D000467 6.3e-06 55.8 279 26.5


User provided reference genes

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