Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003878 Daucus carota HOM05D003967 ORTHO05D004531 1.8e-129 466.1 263 100.0
DCAR_003383 Daucus carota HOM05D003967 ORTHO05D004531 1.5e-30 137.5 265 37.0
PSO675G2743 Papaver somniferum HOM05D003967 ORTHO05D004531 1.9e-30 137.1 262 37.8
TAR362G0123 Trochodendron aralioides HOM05D003967 ORTHO05D004531 3.3e-30 136.3 271 36.9
CSS0024083 Camellia sinensis var. sinensis HOM05D003967 ORTHO05D004531 5.6e-30 135.6 267 36.0
PSO541G0049 Papaver somniferum HOM05D003967 ORTHO05D004531 5.6e-30 135.6 262 38.2
Hma1.2p1_0161F.1_g071320 Hydrangea macrophylla HOM05D003967 ORTHO05D004531 2.8e-29 133.3 265 35.5
Lsat_1_v5_gn_8_128201 Lactuca sativa HOM05D003967 ORTHO05D004531 1.1e-28 131.3 256 35.9
Nn5g27563 Nelumbo nucifera HOM05D003967 ORTHO05D004531 5.2e-28 129.0 152 44.7
TAR633G1936 Trochodendron aralioides HOM05D003967 ORTHO05D004531 1.2e-27 127.9 270 34.8
HanXRQChr17g0556271 Helianthus annuus HOM05D003967 ORTHO05D004531 1.5e-27 127.5 256 35.5
TAR365G1067 Trochodendron aralioides HOM05D003967 ORTHO05D004531 2.2e-26 123.6 267 36.3
AUR62020921 Chenopodium quinoa HOM05D003967 ORTHO05D004531 2.9e-26 123.2 153 42.5
DCAR_022129 Daucus carota HOM05D003967 ORTHO05D004531 2.9e-26 123.2 120 50.8
TWI18G0741 Tripterygium wilfordii HOM05D003967 ORTHO05D004531 2.9e-26 123.2 147 46.9
TWI36G1715 Tripterygium wilfordii HOM05D003967 ORTHO05D004531 3.8e-26 122.9 148 46.6
AUR62018499 Chenopodium quinoa HOM05D003967 ORTHO05D004531 8.4e-26 121.7 153 41.8
Sabra02G0190500 Salix brachista HOM05D003967 ORTHO05D004531 1.1e-25 121.3 149 43.6
Aqoxy3G01671 Aquilegia oxysepala HOM05D003967 ORTHO05D004531 3.2e-25 119.8 153 43.1
MBI08_g10501_MAGBIO Magnolia biondii HOM05D003967 ORTHO05D004531 3.2e-25 119.8 152 43.4
ATR0598G008 Amborella trichopoda HOM05D003967 ORTHO05D004531 4.2e-25 119.4 201 37.8
Potri.002G250200 Populus trichocarpa HOM05D003967 ORTHO05D004531 5.4e-25 119.0 149 42.3
PSO832G2093 Papaver somniferum HOM05D003967 ORTHO05D004531 7.1e-25 118.6 145 44.1
CiPaw.14G043300 Carya illinoinensis HOM05D003967 ORTHO05D004531 9.3e-25 118.2 212 36.8
Dinv13676 Davidia involucrata HOM05D003967 ORTHO05D004531 9.3e-25 118.2 149 43.6
Manes.13G053700 Manihot esculenta HOM05D003967 ORTHO05D004531 1.2e-24 117.9 152 43.4
Nitab4.5_0004393g0050 Nicotiana tabacum HOM05D003967 ORTHO05D004531 4.6e-24 115.9 263 33.1
Nitab4.5_0000038g0070 Nicotiana tabacum HOM05D003967 ORTHO05D004531 6.0e-24 115.5 262 34.4
Ciclev10016703m.g Citrus clementina HOM05D003967 ORTHO05D004531 7.8e-24 115.2 141 44.0
Migut.N00661 Erythranthe guttata HOM05D003967 ORTHO05D004531 7.8e-24 115.2 203 36.5
PSO824G0043 Papaver somniferum HOM05D003967 ORTHO05D004531 1.0e-23 114.8 199 36.7
ECA233G3419 Erigeron canadensis HOM05D003967 ORTHO05D004531 3.0e-23 113.2 145 40.7
Cc01_g16220 Coffea canephora HOM05D003967 ORTHO05D004531 3.9e-23 112.8 260 31.9
BolC5t33217H Brassica oleracea HOM05D003967 ORTHO05D004531 5.1e-23 112.5 212 36.3
GSVIVG01031640001 Vitis vinifera HOM05D003967 ORTHO05D004531 6.6e-23 112.1 268 32.8
Cpa.g.sc8.81 Carica papaya HOM05D003967 ORTHO05D004531 8.7e-23 111.7 142 44.4
CsaV3_3G030630 Cucumis sativus L. HOM05D003967 ORTHO05D004531 1.1e-22 111.3 145 44.1
CiPaw.13G054600 Carya illinoinensis HOM05D003967 ORTHO05D004531 1.9e-22 110.5 117 47.9
GSVIVG01037857001 Vitis vinifera HOM05D003967 ORTHO05D004531 1.9e-22 110.5 110 50.0
MSTRG.17973 Avicennia marina HOM05D003967 ORTHO05D004531 3.3e-22 109.8 243 35.4
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 3.3e-22 109.8 120 48.3
Phvul.010G163400 Phaseolus vulgaris HOM05D003967 ORTHO05D004531 3.3e-22 109.8 106 51.9
Atru.chr4.1064 Acer truncatum HOM05D003967 ORTHO05D004531 4.3e-22 109.4 130 44.6
BraA05t21825Z Brassica rapa HOM05D003967 ORTHO05D004531 4.3e-22 109.4 207 35.3
AT4G27990 Arabidopsis thaliana HOM05D003967 ORTHO05D004531 5.6e-22 109.0 142 42.3
Nitab4.5_0002463g0050 Nicotiana tabacum HOM05D003967 ORTHO05D004531 5.6e-22 109.0 260 31.9
VMungo0331G1295 Vigna mungo HOM05D003967 ORTHO05D004531 5.6e-22 109.0 106 51.9
Aa31sc38G120 Aethionema arabicum HOM05D003967 ORTHO05D004531 7.3e-22 108.6 143 41.3
Gohir.A11G142100 Gossypium hirsutum HOM05D003967 ORTHO05D004531 7.3e-22 108.6 111 48.6
Gohir.D11G148400 Gossypium hirsutum HOM05D003967 ORTHO05D004531 7.3e-22 108.6 111 48.6
Gorai.007G159100 Gossypium raimondii HOM05D003967 ORTHO05D004531 7.3e-22 108.6 111 48.6
Pp3c10_6170 Physcomitrium patens HOM05D003967 ORTHO05D004531 7.3e-22 108.6 143 40.6
Pp3c14_5410 Physcomitrium patens HOM05D003967 ORTHO05D004531 7.3e-22 108.6 114 47.4
SHI10305 Sapria himalayana HOM05D003967 ORTHO05D004531 7.3e-22 108.6 119 47.9
Atru.chr10.322 Acer truncatum HOM05D003967 ORTHO05D004531 9.6e-22 108.2 130 44.6
Atru.chr10.339 Acer truncatum HOM05D003967 ORTHO05D004531 9.6e-22 108.2 130 44.6
Oeu057847.1 Olea europaea HOM05D003967 ORTHO05D004531 9.6e-22 108.2 257 33.5
Solyc06g083110.2 Solanum lycopersicum HOM05D003967 ORTHO05D004531 9.6e-22 108.2 264 33.0
CAN.G874.26 Capsicum annuum HOM05D003967 ORTHO05D004531 1.3e-21 107.8 109 47.7
HPP92_019020 Vanilla planifolia HOM05D003967 ORTHO05D004531 1.3e-21 107.8 148 41.2
CDE02G4486 Ceratophyllum demersum HOM05D003967 ORTHO05D004531 1.6e-21 107.5 233 33.5
ClCG07G014610 Citrullus lanatus HOM05D003967 ORTHO05D004531 1.6e-21 107.5 145 43.4
PGR031G2843 Punica granatum HOM05D003967 ORTHO05D004531 1.6e-21 107.5 141 42.6
Sopen06g034500 Solanum pennellii HOM05D003967 ORTHO05D004531 1.6e-21 107.5 267 33.3
THA.LOC104826649 Tarenaya hassleriana HOM05D003967 ORTHO05D004531 1.6e-21 107.5 142 40.8
AL7G24650 Arabidopsis lyrata HOM05D003967 ORTHO05D004531 2.1e-21 107.1 142 42.3
BcaB03g16171 Brassica carinata HOM05D003967 ORTHO05D004531 2.8e-21 106.7 142 41.5
Lalb_Chr20g0112681 Lupinus albus HOM05D003967 ORTHO05D004531 2.8e-21 106.7 245 32.7
BcaC05g28410 Brassica carinata HOM05D003967 ORTHO05D004531 3.6e-21 106.3 142 40.8
QL08p061776 Quercus lobata HOM05D003967 ORTHO05D004531 3.6e-21 106.3 105 49.5
CANSAT01G2467 Cannabis sativa HOM05D003967 ORTHO05D004531 4.8e-21 105.9 106 49.1
Ciclev10033520m.g Citrus clementina HOM05D003967 ORTHO05D004531 4.8e-21 105.9 142 43.0
Sc25g0005680 Simmondsia chinensis HOM05D003967 ORTHO05D004531 4.8e-21 105.9 264 33.3
TPR.G38809 Trifolium pratense HOM05D003967 ORTHO05D004531 4.8e-21 105.9 120 46.7
AL3G18740 Arabidopsis lyrata HOM05D003967 ORTHO05D004531 6.2e-21 105.5 256 34.0
Carub.0007s1281 Capsella rubella HOM05D003967 ORTHO05D004531 6.2e-21 105.5 142 40.8
CDE05G1038 Ceratophyllum demersum HOM05D003967 ORTHO05D004531 6.2e-21 105.5 152 39.5
MELO3C022654.2 Cucumis melo HOM05D003967 ORTHO05D004531 6.2e-21 105.5 147 42.2
Thhalv10026192m.g Eutrema salsugineum HOM05D003967 ORTHO05D004531 6.2e-21 105.5 243 33.3
Sp7g09800 Schrenkiella parvula HOM05D003967 ORTHO05D004531 6.2e-21 105.5 142 39.4
BcaC07g37415 Brassica carinata HOM05D003967 ORTHO05D004531 8.1e-21 105.1 142 40.1
BolC8t47739H Brassica oleracea HOM05D003967 ORTHO05D004531 8.1e-21 105.1 142 40.1
Lj2P1118T62 Lonicera japonica HOM05D003967 ORTHO05D004531 8.1e-21 105.1 259 30.9
MD09G1163500 Malus domestica HOM05D003967 ORTHO05D004531 8.1e-21 105.1 109 48.6
unitig_0.g411 Utricularia gibba HOM05D003967 ORTHO05D004531 8.1e-21 105.1 118 46.6
Thhalv10021454m.g Eutrema salsugineum HOM05D003967 ORTHO05D004531 1.1e-20 104.8 142 41.5
SalBow6G0539 Salvia bowleyana HOM05D003967 ORTHO05D004531 1.1e-20 104.8 211 34.1
Thecc.01G211900 Theobroma cacao HOM05D003967 ORTHO05D004531 1.8e-20 104.0 259 30.9
Aa31LG5G18010 Aethionema arabicum HOM05D003967 ORTHO05D004531 2.4e-20 103.6 142 38.7
Ah.13g077680 Amaranthus hybridus HOM05D003967 ORTHO05D004531 2.4e-20 103.6 213 36.2
arahy.Tifrunner.gnm1.ann1.52PG7K Arachis hypogaea HOM05D003967 ORTHO05D004531 2.4e-20 103.6 114 47.4
A06p34930 Brassica napus HOM05D003967 ORTHO05D004531 2.4e-20 103.6 197 36.5
BraA06t26417Z Brassica rapa HOM05D003967 ORTHO05D004531 2.4e-20 103.6 197 36.5
Cfa013303 Carpinus fangiana HOM05D003967 ORTHO05D004531 2.4e-20 103.6 146 43.2
Glyma.07G002700 Glycine max HOM05D003967 ORTHO05D004531 2.4e-20 103.6 148 41.2
FAN02G3806 Fragaria x ananassa HOM05D003967 ORTHO05D004531 3.1e-20 103.2 103 49.5
FAN05G3499 Fragaria x ananassa HOM05D003967 ORTHO05D004531 3.1e-20 103.2 103 49.5
FAN09G2378 Fragaria x ananassa HOM05D003967 ORTHO05D004531 3.1e-20 103.2 103 49.5
Glyma.08G223900 Glycine max HOM05D003967 ORTHO05D004531 3.1e-20 103.2 148 40.5
Gohir.A07G090300 Gossypium hirsutum HOM05D003967 ORTHO05D004531 3.1e-20 103.2 144 41.0
PGSC0003DMG400020113 Solanum tuberosum HOM05D003967 ORTHO05D004531 3.1e-20 103.2 263 32.3
Haze_21784 Corylus avellana HOM05D003967 ORTHO05D004531 4.0e-20 102.8 214 41.1
Duzib211G0344 Durio zibethinus HOM05D003967 ORTHO05D004531 4.0e-20 102.8 275 32.4
Psat7g264400 Pisum sativum HOM05D003967 ORTHO05D004531 4.0e-20 102.8 246 32.1
THA.LOC104804641 Tarenaya hassleriana HOM05D003967 ORTHO05D004531 4.0e-20 102.8 218 34.4
MD17G1164100 Malus domestica HOM05D003967 ORTHO05D004531 5.3e-20 102.4 109 47.7
Sed0026883 Sechium edule HOM05D003967 ORTHO05D004531 5.3e-20 102.4 98 53.1
Aqoxy7G02205 Aquilegia oxysepala HOM05D003967 ORTHO05D004531 6.9e-20 102.1 152 36.8
arahy.Tifrunner.gnm1.ann1.4AA542 Arachis hypogaea HOM05D003967 ORTHO05D004531 6.9e-20 102.1 104 48.1
CARHR078570 Cardamine hirsuta HOM05D003967 ORTHO05D004531 6.9e-20 102.1 222 32.0
Oeu003635.1 Olea europaea HOM05D003967 ORTHO05D004531 6.9e-20 102.1 258 32.2
Prupe.3G021000 Prunus persica HOM05D003967 ORTHO05D004531 6.9e-20 102.1 109 47.7
RcHm_v2.0_Chr2g0149631 Rosa chinensis HOM05D003967 ORTHO05D004531 6.9e-20 102.1 103 49.5
Sp3g06360 Schrenkiella parvula HOM05D003967 ORTHO05D004531 6.9e-20 102.1 142 40.1
arahy.Tifrunner.gnm1.ann1.NYJU0L Arachis hypogaea HOM05D003967 ORTHO05D004531 9.0e-20 101.7 136 41.9
SMO361G0364 Selaginella moellendorffii HOM05D003967 ORTHO05D004531 9.0e-20 101.7 98 50.0
SGA_v2.0_scaffold8G04498 Striga asiatica HOM05D003967 ORTHO05D004531 9.0e-20 101.7 145 39.3
Gohir.D07G095000 Gossypium hirsutum HOM05D003967 ORTHO05D004531 1.2e-19 101.3 259 33.6
vmacro02812 Vaccinium macrocarpon HOM05D003967 ORTHO05D004531 1.2e-19 101.3 199 35.7
Gorai.001G102300 Gossypium raimondii HOM05D003967 ORTHO05D004531 1.5e-19 100.9 259 32.8
Lj3g0022091 Lotus japonicus HOM05D003967 ORTHO05D004531 1.5e-19 100.9 100 51.0
AUR62008132 Chenopodium quinoa HOM05D003967 ORTHO05D004531 2.6e-19 100.1 118 43.2
Migut.D00725 Erythranthe guttata HOM05D003967 ORTHO05D004531 2.6e-19 100.1 108 46.3
QL09p045921 Quercus lobata HOM05D003967 ORTHO05D004531 3.4e-19 99.8 212 42.0
QL09p045954 Quercus lobata HOM05D003967 ORTHO05D004531 3.4e-19 99.8 212 42.0
AT3G07430 Arabidopsis thaliana HOM05D003967 ORTHO05D004531 4.5e-19 99.4 202 32.7
BcaNung01818 Brassica carinata HOM05D003967 ORTHO05D004531 4.5e-19 99.4 99 50.5
AUR62028714 Chenopodium quinoa HOM05D003967 ORTHO05D004531 5.8e-19 99.0 118 43.2
FvH4_6g37080 Fragaria vesca HOM05D003967 ORTHO05D004531 5.8e-19 99.0 103 47.6
FAN14G1834 Fragaria x ananassa HOM05D003967 ORTHO05D004531 5.8e-19 99.0 103 47.6
Hma1.2p1_0161F.1_g071330 Hydrangea macrophylla HOM05D003967 ORTHO05D004531 5.8e-19 99.0 108 45.4
HPP92_019774 Vanilla planifolia HOM05D003967 ORTHO05D004531 7.6e-19 98.6 102 48.0
BolC7t44889H Brassica oleracea HOM05D003967 ORTHO05D004531 9.9e-19 98.2 141 41.8
Rhsim01G0073700 Rhododendron simsii HOM05D003967 ORTHO05D004531 9.9e-19 98.2 119 47.1
Rhsim01G0072900 Rhododendron simsii HOM05D003967 ORTHO05D004531 1.3e-18 97.8 98 51.0
Duzib133G1035 Durio zibethinus HOM05D003967 ORTHO05D004531 1.7e-18 97.4 261 31.8
Medtr4g005520 Medicago truncatula HOM05D003967 ORTHO05D004531 2.9e-18 96.7 218 33.0
Cc01_g16230 Coffea canephora HOM05D003967 ORTHO05D004531 6.4e-18 95.5 104 43.3
Hma1.2p1_0781F.1_g216900 Hydrangea macrophylla HOM05D003967 ORTHO05D004531 1.1e-17 94.7 242 31.4
TPR.G23545 Trifolium pratense HOM05D003967 ORTHO05D004531 1.4e-17 94.4 81 54.3
Rhsim09G0097000 Rhododendron simsii HOM05D003967 ORTHO05D004531 3.2e-17 93.2 102 48.0
Carub.0003s0698 Capsella rubella HOM05D003967 ORTHO05D004531 4.2e-17 92.8 146 36.3
Sed0008239 Sechium edule HOM05D003967 ORTHO05D004531 5.4e-17 92.4 86 52.3
BolC8t47525H Brassica oleracea HOM05D003967 ORTHO05D004531 1.6e-16 90.9 238 30.7
BNapus_Darmor_BZH_scaffold_109p00040 Brassica napus HOM05D003967 ORTHO05D004531 3.9e-15 86.3 145 33.8
BolC1t05549H Brassica oleracea HOM05D003967 ORTHO05D004531 8.7e-15 85.1 103 40.8
BraA01t04380Z Brassica rapa HOM05D003967 ORTHO05D004531 8.7e-15 85.1 103 39.8
vmacro03028 Vaccinium macrocarpon HOM05D003967 ORTHO05D004531 8.7e-15 85.1 207 34.3
CBR_g19400 Chara braunii HOM05D003967 ORTHO05D004531 2.5e-14 83.6 82 51.2
SEGI_18696 Sequoiadendron giganteum HOM05D003967 ORTHO05D004531 2.5e-14 83.6 96 39.6
Zm00001eb301730 Zea mays HOM05D003967 ORTHO05D004531 5.6e-14 82.4 99 42.4
vmacro15744 Vaccinium macrocarpon HOM05D003967 ORTHO05D004531 1.3e-13 81.3 139 38.1
Os07g0185300 Oryza sativa ssp. japonica HOM05D003967 ORTHO05D004531 2.1e-13 80.5 89 41.6
A05p29320 Brassica napus HOM05D003967 ORTHO05D004531 9.0e-12 75.1 61 57.4
C05p44940 Brassica napus HOM05D003967 ORTHO05D004531 9.0e-12 75.1 61 57.4
C08p06830 Brassica napus HOM05D003967 ORTHO05D004531 9.0e-12 75.1 61 57.4
C07p43620 Brassica napus HOM05D003967 ORTHO05D004531 7.6e-11 72.0 61 55.7
C04p52640 Brassica napus HOM05D003967 ORTHO05D004531 1.1e-09 68.2 92 40.2
MCO11G375 Micromonas commoda HOM05D003967 ORTHO05D004531 2.4e-09 67.0 80 36.2
PRCOL_00004130 Prasinoderma coloniale HOM05D003967 ORTHO05D004531 3.2e-09 66.6 80 38.8
EL10Ac5g10641 Beta vulgaris HOM05D003967 ORTHO05D004531 9.3e-09 65.1 55 54.5
Cre02.g080250 Chlamydomonas reinhardtii HOM05D003967 ORTHO05D004531 1.0e-07 61.6 71 36.6
Migut.A00074 Erythranthe guttata HOM05D006390 ORTHO05D007899 1.8e-07 60.8 72 41.7
Migut.D01988 Erythranthe guttata HOM05D003967 ORTHO05D004531 1.8e-07 60.8 80 33.8
SalBow1G6552 Salvia bowleyana HOM05D006390 ORTHO05D007899 3.0e-07 60.1 72 43.1
Cre16.g684300 Chlamydomonas reinhardtii HOM05D003967 ORTHO05D004531 5.1e-07 59.3 67 34.3
Thhalv10014336m.g Eutrema salsugineum HOM05D006390 ORTHO05D007899 2.5e-06 57.0 133 31.6
Hma1.2p1_0836F.1_g225960 Hydrangea macrophylla HOM05D006390 ORTHO05D007899 3.3e-06 56.6 72 40.3
MCO11G319 Micromonas commoda HOM05D006390 ORTHO05D007899 4.3e-06 56.2 75 44.0
Aa31LG1G13500 Aethionema arabicum HOM05D006390 ORTHO05D007899 7.4e-06 55.5 79 38.0
BraA03t10358Z Brassica rapa HOM05D006390 ORTHO05D007899 7.4e-06 55.5 128 30.5
Duzib187G1133 Durio zibethinus HOM05D006390 ORTHO05D007899 7.4e-06 55.5 127 33.1
QL02p017058 Quercus lobata HOM05D006390 ORTHO05D007899 7.4e-06 55.5 72 38.9
ATR0598G016 Amborella trichopoda HOM05D006390 ORTHO05D007899 9.6e-06 55.1 73 35.6


User provided reference genes

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