Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 3.4e-65 251.5 129 100.0
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 4.4e-20 101.7 107 57.0
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 2.2e-19 99.4 121 48.8
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 2.0e-17 92.8 130 46.9
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 3.5e-17 92.0 131 46.6
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 8.6e-16 87.4 117 47.9
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 3.3e-15 85.5 132 43.9
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 3.3e-15 85.5 124 39.5
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 7.3e-15 84.3 127 42.5
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 7.3e-15 84.3 131 41.2
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.6e-14 83.2 117 45.3
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.6e-14 83.2 133 41.4
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 3.6e-14 82.0 133 37.6
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 6.2e-14 81.3 121 43.0
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 8.0e-14 80.9 126 43.7
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 8.0e-14 80.9 110 48.2
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 8.0e-14 80.9 124 41.9
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 1.4e-13 80.1 121 43.8
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.1e-13 79.0 124 41.1
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 4.0e-13 78.6 127 42.5
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 4.0e-13 78.6 124 41.1
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 4.0e-13 78.6 134 39.6
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 4.0e-13 78.6 119 44.5
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.2e-13 78.2 128 39.8
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 5.2e-13 78.2 129 39.5
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 5.2e-13 78.2 123 42.3
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 6.8e-13 77.8 135 37.8
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.2e-12 77.0 125 41.6
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.2e-12 77.0 128 39.1
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.5e-12 76.6 115 44.3
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.0e-12 76.3 128 39.1
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.0e-12 76.3 128 41.4
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.0e-12 76.3 128 41.4
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 2.6e-12 75.9 108 43.5
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.4e-12 75.5 130 40.8
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 3.4e-12 75.5 135 37.8
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 5.8e-12 74.7 118 42.4
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 5.8e-12 74.7 103 45.6
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 5.8e-12 74.7 118 40.7
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 7.5e-12 74.3 126 39.7
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 7.5e-12 74.3 112 38.4
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 7.5e-12 74.3 129 39.5
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.3e-11 73.6 112 41.1
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.2e-11 72.8 121 38.8
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.2e-11 72.8 112 40.2
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 2.2e-11 72.8 126 41.3
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.9e-11 72.4 125 36.8
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 3.7e-11 72.0 116 45.7
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 6.4e-11 71.2 126 38.1
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 1.4e-10 70.1 99 44.4
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.4e-10 70.1 119 40.3
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 1.4e-10 70.1 121 38.8
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 3.2e-10 68.9 129 37.2
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 4.1e-10 68.6 127 39.4
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 4.1e-10 68.6 127 39.4
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 4.1e-10 68.6 127 39.4
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 4.1e-10 68.6 125 32.8
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 4.1e-10 68.6 110 36.4
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 4.1e-10 68.6 130 32.3
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 5.4e-10 68.2 136 36.0
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 9.2e-10 67.4 101 44.6
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 1.2e-09 67.0 121 40.5
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 2.0e-09 66.2 130 36.2
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 4.6e-09 65.1 130 36.2
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 6.0e-09 64.7 130 38.5
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 6.0e-09 64.7 114 37.7
MBI02_g25781_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 7.8e-09 64.3 113 43.4
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 7.8e-09 64.3 123 36.6
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 1.0e-08 63.9 131 35.9
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.0e-08 63.9 111 40.5
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 3.9e-08 62.0 124 31.5
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 5.0e-08 61.6 125 37.6
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 6.6e-08 61.2 105 39.0
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.6e-08 61.2 127 37.0
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 6.6e-08 61.2 133 37.6
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 6.6e-08 61.2 127 32.3
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 8.6e-08 60.8 119 37.0
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 8.6e-08 60.8 123 36.6
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 1.1e-07 60.5 126 36.5
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 1.1e-07 60.5 126 37.3
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 1.1e-07 60.5 128 32.8
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 1.1e-07 60.5 110 34.5
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 1.5e-07 60.1 120 38.3
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 1.9e-07 59.7 127 37.8
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.9e-07 59.7 130 31.5
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 1.9e-07 59.7 127 37.0
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 2.5e-07 59.3 116 37.9
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 4.3e-07 58.5 132 34.8
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 4.3e-07 58.5 118 32.2
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 4.3e-07 58.5 121 37.2
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 5.6e-07 58.2 118 35.6
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 7.3e-07 57.8 128 36.7
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 7.3e-07 57.8 116 33.6
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 7.3e-07 57.8 107 39.3
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 9.5e-07 57.4 116 32.8
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.2e-06 57.0 123 35.8
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 1.2e-06 57.0 120 35.8
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 2.1e-06 56.2 121 36.4
MBI02_g25782_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 2.1e-06 56.2 120 36.7
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 2.8e-06 55.8 123 34.1
Ca_00842_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 3.6e-06 55.5 105 36.2
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 4.7e-06 55.1 127 29.9
ATR0165G002 Amborella trichopoda HOM05D005932 ORTHO05D006213 8.1e-06 54.3 98 38.8


User provided reference genes

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