Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003789 Daucus carota HOM05D018164 ORTHO05D017223 3.2e-264 914.4 433 100.0
DCAR_023633 Daucus carota HOM05D018164 ORTHO05D017223 8.0e-50 202.2 437 33.9
DCAR_023396 Daucus carota HOM05D018164 ORTHO05D017223 6.6e-44 182.6 454 32.8
DCAR_019026 Daucus carota HOM05D018164 ORTHO05D017223 1.4e-38 164.9 417 31.9
CSS0002825 Camellia sinensis var. sinensis HOM05D018164 ORTHO05D017223 1.8e-25 121.3 395 26.8
Atru.chr12.695 Acer truncatum HOM05D000151 ORTHO05D000074 5.3e-17 93.2 368 28.3
QL04p010169 Quercus lobata HOM05D000151 ORTHO05D000074 1.2e-16 92.0 420 27.4
Atru.chr12.669 Acer truncatum HOM05D000151 ORTHO05D000074 2.0e-16 91.3 368 28.0
Dinv40803 Davidia involucrata HOM05D000151 ORTHO05D000074 2.6e-16 90.9 401 25.2
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 3.4e-16 90.5 420 27.4
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 5.4e-14 83.2 418 24.2
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 9.3e-14 82.4 422 23.9
Dinv40802 Davidia involucrata HOM05D000151 ORTHO05D000074 2.7e-13 80.9 423 24.6
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 1.3e-12 78.6 408 23.5
Ciclev10010650m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.3e-11 73.9 382 28.3
TWI38G0386 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 7.3e-11 72.8 379 24.3
QL04p009931 Quercus lobata HOM05D000151 ORTHO05D000074 1.3e-10 72.0 394 24.4
QL04p019119 Quercus lobata HOM05D000151 ORTHO05D000074 1.1e-09 68.9 164 28.0
Aqoxy7G03491 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-09 68.6 416 22.4
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.4e-09 68.6 421 23.0
Prupe.1G050400 Prunus persica HOM05D000151 ORTHO05D000074 1.4e-09 68.6 403 21.1
Thecc.07G142100 Theobroma cacao HOM05D009259 ORTHO05D000074 4.0e-09 67.0 404 22.8
QL04p012573 Quercus lobata HOM05D000151 ORTHO05D000074 6.9e-09 66.2 460 23.3
Rhsim01G0011000 Rhododendron simsii HOM05D001286 ORTHO05D000440 4.5e-08 63.5 242 26.4
Thecc.10G188800 Theobroma cacao HOM05D000151 ORTHO05D000074 4.5e-08 63.5 260 26.5
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 5.8e-08 63.2 400 21.5
QL01p007568 Quercus lobata HOM05D000151 ORTHO05D000074 9.9e-08 62.4 419 24.6
QL04p009594 Quercus lobata HOM05D000151 ORTHO05D000074 9.9e-08 62.4 474 21.7
QL04p013607 Quercus lobata HOM05D000151 ORTHO05D000074 9.9e-08 62.4 460 23.0
Rhsim13G0207700 Rhododendron simsii HOM05D004351 ORTHO05D005196 1.3e-07 62.0 417 22.5
CiPaw.08G069900 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.7e-07 61.6 386 22.3
TWI74G0260 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.7e-07 61.6 411 22.9
MD07G1270300 Malus domestica HOM05D000151 ORTHO05D000074 3.8e-07 60.5 407 23.8
QL05p064445 Quercus lobata HOM05D000151 ORTHO05D000074 3.8e-07 60.5 414 21.7
QL04p009939 Quercus lobata HOM05D000151 ORTHO05D000074 4.9e-07 60.1 431 22.7
COL.COLO4_18719 Corchorus olitorius HOM05D010078 ORTHO05D000440 6.4e-07 59.7 273 24.2
Duzib151G0485 Durio zibethinus HOM05D000151 ORTHO05D000074 6.4e-07 59.7 419 21.5
QL04p009567 Quercus lobata HOM05D000151 ORTHO05D000074 6.4e-07 59.7 467 22.1
Haze_03475 Corylus avellana HOM05D018164 ORTHO05D017223 8.4e-07 59.3 391 24.3
MD10G1231500 Malus domestica HOM05D000151 ORTHO05D000074 1.4e-06 58.5 436 22.9
PGSC0003DMG400009960 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.4e-06 58.5 422 23.0
PSO210G2067 Papaver somniferum HOM05D003035 ORTHO05D000440 1.9e-06 58.2 265 27.2
QL04p012604 Quercus lobata HOM05D000151 ORTHO05D000074 1.9e-06 58.2 465 22.6
Rhsim01G0011600 Rhododendron simsii HOM05D001286 ORTHO05D000440 1.9e-06 58.2 236 25.4
Nitab4.5_0003280g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.4e-06 57.8 429 21.4
Manes.07G048900 Manihot esculenta HOM05D000151 ORTHO05D000074 4.2e-06 57.0 213 23.5
PSO210G2788 Papaver somniferum HOM05D003035 ORTHO05D000440 4.2e-06 57.0 132 33.3
Potri.004G134900 Populus trichocarpa HOM05D000151 ORTHO05D000074 5.5e-06 56.6 409 21.5
Rhsim01G0011500 Rhododendron simsii HOM05D001286 ORTHO05D000440 5.5e-06 56.6 236 25.0
RhsimUnG0017800 Rhododendron simsii HOM05D003035 ORTHO05D000440 5.5e-06 56.6 238 24.8
Manes.10G088310 Manihot esculenta HOM05D000151 ORTHO05D000074 7.1e-06 56.2 144 29.9
Ciclev10017666m.g Citrus clementina HOM05D000151 ORTHO05D000074 9.3e-06 55.8 220 24.5
Rhsim01G0008500 Rhododendron simsii HOM05D001286 ORTHO05D000440 9.3e-06 55.8 236 26.7
RhsimUnG0079600 Rhododendron simsii HOM05D001286 ORTHO05D000440 9.3e-06 55.8 236 26.7


User provided reference genes

Program Settings