Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 1.4e-47 192.6 94 100.0
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 5.3e-31 137.5 87 71.3
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 4.5e-30 134.4 92 65.2
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 2.9e-29 131.7 80 72.5
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 1.1e-28 129.8 87 70.1
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 1.4e-28 129.4 80 71.2
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 1.9e-28 129.0 94 64.9
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 4.2e-28 127.9 82 69.5
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 7.1e-28 127.1 94 62.8
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 1.2e-27 126.3 81 71.6
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 2.1e-27 125.6 79 72.2
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 2.1e-27 125.6 88 62.5
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 6.0e-27 124.0 80 70.0
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 7.9e-27 123.6 79 70.9
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 1.0e-26 123.2 80 72.5
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 1.3e-26 122.9 79 69.6
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 1.8e-26 122.5 81 70.4
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 2.3e-26 122.1 88 61.4
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 3.0e-26 121.7 81 69.1
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 3.9e-26 121.3 80 68.8
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 3.9e-26 121.3 81 66.7
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 3.9e-26 121.3 79 68.4
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 3.9e-26 121.3 79 68.4
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 5.1e-26 120.9 80 70.0
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 8.7e-26 120.2 79 69.6
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 8.7e-26 120.2 85 65.9
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 1.1e-25 119.8 79 67.1
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 1.1e-25 119.8 84 66.7
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 1.5e-25 119.4 80 68.8
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 1.5e-25 119.4 81 67.9
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 1.5e-25 119.4 87 63.2
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 1.9e-25 119.0 81 64.2
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 2.5e-25 118.6 95 58.9
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 7.4e-25 117.1 87 60.9
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 9.6e-25 116.7 73 72.6
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 9.6e-25 116.7 81 61.7
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 1.3e-24 116.3 78 62.8
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 1.3e-24 116.3 79 65.8
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 2.1e-24 115.5 79 63.3
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 2.1e-24 115.5 87 62.1
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 2.8e-24 115.2 79 64.6
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 2.8e-24 115.2 94 60.6
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 3.7e-24 114.8 90 60.0
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 3.7e-24 114.8 79 65.8
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 4.8e-24 114.4 92 57.6
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 6.2e-24 114.0 88 59.1
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 6.2e-24 114.0 79 63.3
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 6.2e-24 114.0 79 65.8
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 1.4e-23 112.8 79 62.0
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 1.8e-23 112.5 79 62.0
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 2.4e-23 112.1 79 60.8
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 3.1e-23 111.7 81 59.3
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 3.1e-23 111.7 81 59.3
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 5.3e-23 110.9 92 55.4
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 6.9e-23 110.5 79 60.8
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 1.2e-22 109.8 80 63.8
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 2.0e-22 109.0 81 58.0
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 2.0e-22 109.0 81 58.0
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 2.0e-22 109.0 81 58.0
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 4.5e-22 107.8 84 59.5
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 1.0e-21 106.7 89 56.2
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 2.9e-21 105.1 93 54.8
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 3.8e-21 104.8 91 52.7
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 6.5e-21 104.0 88 56.8
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 2.1e-19 99.0 84 52.4
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 2.7e-19 98.6 87 55.2
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 6.0e-19 97.4 87 55.2
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 1.8e-18 95.9 87 54.0
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 3.0e-18 95.1 90 50.0
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 1.3e-16 89.7 71 59.2
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 6.3e-16 87.4 57 64.9
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 3.6e-11 71.6 63 54.0
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 4.6e-11 71.2 48 60.4
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 3.9e-10 68.2 83 43.4
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 1.5e-09 66.2 80 38.8


User provided reference genes

Program Settings