Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 1.1e-65 253.8 190 100.0
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 2.0e-35 153.3 187 47.6
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 1.3e-34 150.6 132 60.6
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 3.0e-34 149.4 131 58.8
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 5.0e-34 148.7 193 48.7
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 2.5e-33 146.4 203 46.8
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 3.3e-33 146.0 131 58.0
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 4.3e-33 145.6 131 59.5
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 9.5e-33 144.4 131 58.0
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 1.2e-32 144.1 131 59.5
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 1.6e-32 143.7 132 59.1
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 2.1e-32 143.3 131 57.3
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 2.1e-32 143.3 131 57.3
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 2.1e-32 143.3 178 51.7
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 2.8e-32 142.9 132 58.3
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 2.8e-32 142.9 130 56.9
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 3.6e-32 142.5 132 59.1
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.6e-32 142.5 132 59.1
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 3.6e-32 142.5 131 58.8
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 4.7e-32 142.1 132 59.1
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 8.0e-32 141.4 131 56.5
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 8.0e-32 141.4 132 58.3
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 8.0e-32 141.4 132 59.1
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.1e-31 141.0 130 56.2
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 1.4e-31 140.6 131 57.3
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 1.8e-31 140.2 200 46.5
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 2.3e-31 139.8 197 42.6
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 3.1e-31 139.4 131 59.5
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 3.1e-31 139.4 131 55.7
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 3.1e-31 139.4 131 55.7
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 3.1e-31 139.4 131 56.5
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 3.1e-31 139.4 131 53.4
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 5.2e-31 138.7 131 57.3
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 8.9e-31 137.9 131 55.7
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 8.9e-31 137.9 131 53.4
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 8.9e-31 137.9 132 56.8
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.2e-30 137.5 191 49.7
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 1.2e-30 137.5 131 55.0
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 1.5e-30 137.1 131 59.5
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 1.5e-30 137.1 131 52.7
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 2.0e-30 136.7 131 53.4
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 2.6e-30 136.3 130 54.6
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 2.6e-30 136.3 178 55.6
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 3.4e-30 136.0 194 46.4
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 4.4e-30 135.6 131 53.4
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 4.4e-30 135.6 206 43.7
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 5.8e-30 135.2 130 55.4
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 7.5e-30 134.8 131 55.0
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 7.5e-30 134.8 131 54.2
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 9.8e-30 134.4 131 52.7
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 9.8e-30 134.4 131 52.7
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 9.8e-30 134.4 131 55.0
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 1.3e-29 134.0 131 55.0
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 1.7e-29 133.7 133 54.9
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 1.7e-29 133.7 131 52.7
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 1.7e-29 133.7 190 43.2
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 2.9e-29 132.9 131 55.0
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 6.4e-29 131.7 187 46.0
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 8.3e-29 131.3 131 51.9
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 1.1e-28 131.0 174 46.0
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.9e-28 130.2 132 56.8
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 1.9e-28 130.2 131 52.7
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 2.4e-28 129.8 197 45.2
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 2.4e-28 129.8 189 41.8
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 3.2e-28 129.4 132 53.0
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 5.4e-28 128.6 186 47.8
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 5.4e-28 128.6 202 44.6
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 7.0e-28 128.3 132 54.5
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 9.2e-28 127.9 130 49.2
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 9.2e-28 127.9 130 50.8
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 1.6e-27 127.1 189 43.4
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 2.1e-27 126.7 131 51.1
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 3.5e-27 125.9 130 49.2
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 3.5e-27 125.9 131 51.1
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 4.6e-27 125.6 192 49.0
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 4.6e-27 125.6 192 49.0
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 4.6e-27 125.6 130 48.5
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 4.6e-27 125.6 192 49.0
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 4.6e-27 125.6 130 48.5
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 6.0e-27 125.2 130 48.5
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 6.0e-27 125.2 131 50.4
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 6.0e-27 125.2 126 53.2
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 1.0e-26 124.4 130 47.7
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 1.0e-26 124.4 131 51.1
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.3e-26 123.2 130 51.5
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 2.3e-26 123.2 130 50.0
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 2.3e-26 123.2 130 50.0
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 3.0e-26 122.9 189 45.5
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 3.0e-26 122.9 197 49.7
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 3.0e-26 122.9 181 44.8
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 3.0e-26 122.9 131 50.4
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 3.9e-26 122.5 131 51.1
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 5.1e-26 122.1 130 46.9
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 5.1e-26 122.1 204 51.0
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 6.6e-26 121.7 130 48.5
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 1.1e-25 120.9 187 50.3
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 2.5e-25 119.8 131 49.6
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 4.3e-25 119.0 191 42.4
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 9.5e-25 117.9 130 46.2
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 9.5e-25 117.9 170 40.6
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 2.1e-24 116.7 127 50.4
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 3.6e-24 115.9 183 53.0
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 3.6e-24 115.9 127 52.0
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.8e-23 113.6 126 50.0
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.3e-23 113.2 130 45.4
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 8.9e-23 111.3 130 47.7
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 1.2e-22 110.9 130 47.7
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.4e-20 104.0 111 49.5
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-19 100.9 191 45.0
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 6.6e-18 95.1 193 37.8
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.1e-17 94.4 191 46.1
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 1.5e-17 94.0 132 43.2
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 1.5e-17 94.0 132 43.2
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.5e-17 94.0 130 44.6
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 4.3e-17 92.4 190 35.8
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-16 90.9 132 41.7
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-16 90.9 132 41.7
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 1.2e-16 90.9 132 41.7
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 1.6e-16 90.5 192 37.5
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 4.7e-16 89.0 192 34.9
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 6.2e-16 88.6 192 34.9
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 6.2e-16 88.6 192 34.9
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 6.2e-16 88.6 127 44.1
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 6.2e-16 88.6 131 42.7
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 8.1e-16 88.2 192 37.0
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 1.1e-15 87.8 175 38.3
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 1.8e-15 87.0 132 40.2
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 4.0e-15 85.9 193 37.3
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.5e-14 84.0 96 45.8
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 3.2e-12 76.3 188 33.5
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.0e-10 71.2 58 60.3
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 1.0e-10 71.2 111 42.3
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 2.3e-10 70.1 128 36.7
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 3.9e-10 69.3 128 36.7
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 1.1e-09 67.8 128 35.2
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 2.4e-07 60.1 50 54.0
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.4e-07 60.1 63 55.6
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.5e-06 57.4 42 66.7


User provided reference genes

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