Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 2.6e-189 665.2 332 100.0
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 3.6e-151 538.5 332 78.3
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 1.4e-150 536.6 339 79.1
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 1.8e-150 536.2 332 77.7
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 4.0e-150 535.0 332 77.7
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 6.8e-150 534.3 335 78.2
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 4.4e-149 531.6 333 77.8
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 4.4e-149 531.6 333 77.8
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 6.4e-148 527.7 332 76.8
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 6.6e-145 517.7 335 76.4
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 1.9e-144 516.2 334 77.2
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.2e-143 513.5 333 78.4
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 3.6e-143 511.9 322 77.6
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 1.4e-142 510.0 326 78.2
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 9.0e-142 507.3 328 77.1
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 1.2e-141 506.9 323 76.8
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 1.5e-141 506.5 331 75.2
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.3e-140 503.4 333 76.0
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 1.7e-140 503.1 333 76.0
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 2.9e-140 502.3 331 75.5
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 1.1e-139 500.4 327 74.9
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 1.1e-139 500.4 322 76.4
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 1.4e-139 500.0 334 74.6
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 1.9e-139 499.6 333 75.7
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 9.3e-139 497.3 298 80.9
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.2e-138 496.9 323 74.9
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 2.1e-138 496.1 323 74.9
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 6.0e-138 494.6 323 74.6
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 1.3e-137 493.4 333 72.4
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 8.7e-137 490.7 336 73.2
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 1.5e-136 490.0 331 74.0
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 1.5e-136 490.0 337 73.3
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 1.9e-136 489.6 333 72.4
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 2.5e-136 489.2 332 71.7
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 3.3e-136 488.8 331 74.0
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 9.6e-136 487.3 324 74.7
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 2.8e-135 485.7 398 63.6
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 3.6e-135 485.3 333 73.3
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 2.4e-134 482.6 333 73.6
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 2.4e-134 482.6 331 72.2
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 3.1e-134 482.3 331 71.6
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 4.0e-134 481.9 332 72.6
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 4.0e-134 481.9 331 71.6
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 4.0e-134 481.9 425 60.9
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 5.3e-134 481.5 332 72.6
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 9.0e-134 480.7 333 70.6
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 9.0e-134 480.7 333 70.6
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 1.5e-133 479.9 332 72.3
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.6e-133 479.2 333 70.9
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 7.6e-133 477.6 325 72.0
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 9.9e-133 477.2 333 70.0
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 1.3e-132 476.9 341 70.7
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.3e-132 476.9 327 73.1
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 3.2e-131 472.2 342 69.6
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 4.2e-131 471.9 341 69.5
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 7.1e-131 471.1 303 74.9
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 7.1e-131 471.1 314 71.7
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 1.6e-130 469.9 334 70.4
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 4.6e-130 468.4 342 69.0
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 6.0e-130 468.0 335 70.1
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 6.0e-130 468.0 335 70.1
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 7.9e-130 467.6 325 73.5
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 7.9e-130 467.6 330 72.1
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 1.8e-129 466.5 342 68.7
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 1.8e-129 466.5 342 68.7
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 3.9e-129 465.3 330 71.5
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 5.1e-129 464.9 297 77.4
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 8.7e-129 464.2 297 77.1
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 2.4e-126 456.1 270 80.4
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 2.6e-125 452.6 281 77.9
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 4.5e-125 451.8 273 79.1
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 9.9e-125 450.7 281 78.3
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 1.7e-124 449.9 325 70.5
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 3.9e-121 438.7 329 69.6
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 5.3e-118 428.3 259 78.0
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 1.2e-117 427.2 332 66.3
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.5e-117 426.8 325 69.2
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 7.6e-117 424.5 334 67.4
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 3.2e-115 419.1 312 66.3
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 1.3e-113 413.7 303 70.3
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 2.3e-113 412.9 340 63.8
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 1.5e-112 410.2 297 70.0
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 3.3e-112 409.1 306 68.0
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 1.1e-110 404.1 254 76.8
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 1.8e-110 403.3 348 61.5
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 9.0e-110 401.0 309 69.6
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 1.2e-106 390.6 328 63.7
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.6e-106 389.0 267 70.0
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 7.9e-106 387.9 274 71.2
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 3.9e-105 385.6 323 59.1
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 9.7e-104 380.9 328 62.5
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 2.4e-102 376.3 320 59.4
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 9.7e-96 354.4 301 57.5
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 2.8e-95 352.8 320 54.1
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 4.8e-95 352.1 297 64.0
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 7.2e-91 338.2 277 59.9
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 6.7e-89 331.6 647 36.0
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.1e-88 330.9 327 57.2
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 1.3e-87 327.4 237 71.3
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 7.2e-83 311.6 221 70.1
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 4.0e-81 305.8 326 52.5
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 8.0e-74 281.6 332 50.3
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 6.3e-71 271.9 166 75.9
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 4.1e-70 269.2 201 61.2
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 7.7e-69 265.0 228 57.5
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 1.1e-67 261.2 204 65.7
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 3.3e-67 259.6 334 47.0
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 4.4e-64 249.2 158 74.1
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 1.3e-60 237.7 204 61.8
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 6.1e-58 228.8 159 71.1
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 2.5e-51 206.8 256 47.7
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 1.7e-47 194.1 188 51.1
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 3.2e-46 189.9 158 59.5
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 7.8e-45 185.3 129 71.3
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 8.1e-42 175.3 102 78.4
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 1.5e-40 171.0 90 87.8
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 3.5e-29 133.3 282 35.5
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 8.7e-28 128.6 80 75.0
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.6e-26 123.2 105 59.0
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 8.1e-26 122.1 285 30.5
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 1.2e-16 91.7 359 24.8
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 7.4e-11 72.4 46 71.7
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 8.1e-10 68.9 54 68.5
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 2.0e-08 64.3 59 59.3
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 4.5e-08 63.2 50 66.0
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 7.1e-06 55.8 30 76.7
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 7.1e-06 55.8 55 58.2


User provided reference genes

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