Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 8.5e-112 407.1 223 100.0
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 1.7e-51 206.8 158 64.6
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 6.4e-51 204.9 227 48.9
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 1.9e-50 203.4 226 51.3
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 2.4e-50 203.0 229 50.7
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 7.1e-50 201.4 154 61.0
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 9.2e-50 201.1 231 48.5
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 1.6e-49 200.3 158 60.1
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 1.6e-49 200.3 160 60.6
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 3.5e-49 199.1 158 59.5
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 4.6e-49 198.7 158 62.0
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 1.0e-48 197.6 152 62.5
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 1.3e-48 197.2 156 61.5
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 1.3e-48 197.2 160 60.0
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 3.9e-48 195.7 158 60.1
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 3.9e-48 195.7 216 49.5
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 8.6e-48 194.5 226 46.9
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 8.6e-48 194.5 218 48.2
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 1.5e-47 193.7 156 57.7
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 2.5e-47 193.0 143 62.2
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 2.5e-47 193.0 225 49.8
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 2.5e-47 193.0 157 59.9
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 3.3e-47 192.6 160 60.6
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 4.3e-47 192.2 187 51.3
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 9.5e-47 191.0 160 60.0
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 9.5e-47 191.0 187 52.4
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.6e-46 190.3 205 51.2
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 2.1e-46 189.9 230 47.8
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 2.8e-46 189.5 225 46.7
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 2.8e-46 189.5 227 47.6
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 6.2e-46 188.3 226 46.5
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 8.1e-46 188.0 157 56.7
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 2.3e-45 186.4 187 51.3
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 2.3e-45 186.4 155 56.8
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 2.3e-45 186.4 188 53.2
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 4.0e-45 185.7 152 55.9
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 5.2e-45 185.3 234 47.0
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 8.9e-45 184.5 145 61.4
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 8.9e-45 184.5 158 55.7
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 1.2e-44 184.1 157 60.5
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 1.2e-44 184.1 157 61.1
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 2.6e-44 183.0 194 48.5
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 2.6e-44 183.0 160 58.8
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 3.4e-44 182.6 193 50.8
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 4.4e-44 182.2 156 56.4
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 4.4e-44 182.2 188 48.9
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 4.4e-44 182.2 157 59.9
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 2.2e-43 179.9 162 53.1
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 2.2e-43 179.9 162 53.1
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 2.2e-43 179.9 162 53.1
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 3.8e-43 179.1 162 52.5
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 4.9e-43 178.7 162 52.5
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 6.4e-43 178.3 146 56.2
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 6.4e-43 178.3 221 41.6
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 8.4e-43 177.9 225 43.1
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 1.1e-42 177.6 162 52.5
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.1e-42 177.6 206 45.6
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 2.4e-42 176.4 162 51.9
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 3.2e-42 176.0 145 58.6
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 3.2e-42 176.0 155 55.5
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 4.1e-42 175.6 227 45.4
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 5.4e-42 175.3 174 51.1
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 7.1e-42 174.9 162 51.2
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 9.2e-42 174.5 127 66.1
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 9.2e-42 174.5 162 52.5
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 9.2e-42 174.5 158 54.4
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 1.2e-41 174.1 156 50.6
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 1.6e-41 173.7 157 52.9
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 2.7e-41 172.9 161 50.3
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 3.5e-41 172.6 159 51.6
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 4.6e-41 172.2 143 57.3
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 7.8e-41 171.4 157 52.9
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 1.7e-40 170.2 158 52.5
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 3.9e-40 169.1 264 40.2
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 1.9e-39 166.8 194 49.0
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 9.6e-39 164.5 158 53.8
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 1.2e-38 164.1 158 51.9
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 1.1e-37 161.0 127 59.1
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 1.4e-37 160.6 147 55.8
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 1.5e-36 157.1 147 55.8
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 5.8e-36 155.2 127 58.3
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 7.6e-36 154.8 154 50.0
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 1.7e-35 153.7 137 54.0
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 1.7e-35 153.7 224 40.6
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 2.2e-35 153.3 240 39.2
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 4.9e-35 152.1 158 51.3
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 1.6e-33 147.1 120 58.3
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 6.0e-33 145.2 153 47.7
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 1.7e-32 143.7 200 42.5
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 2.3e-32 143.3 228 39.0
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.3e-30 137.5 218 38.5
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 5.3e-29 132.1 169 41.4
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 3.1e-21 106.3 124 43.5
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 3.8e-19 99.4 82 61.0
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 7.9e-17 91.7 122 42.6
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 8.7e-16 88.2 149 38.3
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 4.3e-15 85.9 149 37.6
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 6.9e-13 78.6 153 30.7
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 2.5e-07 60.1 66 43.9
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 4.8e-06 55.8 104 29.8


User provided reference genes

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