Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 4.4e-162 574.7 318 100.0
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 2.7e-95 352.8 333 60.1
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 6.7e-94 348.2 325 60.6
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 8.7e-94 347.8 321 62.6
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 2.1e-92 343.2 321 59.5
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 4.5e-90 335.5 320 61.2
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 1.7e-89 333.6 313 58.5
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 1.7e-89 333.6 319 56.4
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 3.8e-89 332.4 319 57.4
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 3.8e-89 332.4 315 52.1
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 3.8e-89 332.4 315 52.1
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 4.9e-89 332.0 322 55.3
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 4.9e-89 332.0 322 55.3
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 8.4e-89 331.3 334 54.2
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 2.4e-88 329.7 325 60.3
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 3.2e-88 329.3 319 56.7
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 5.5e-88 328.6 322 54.3
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 7.1e-88 328.2 321 56.1
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 6.0e-87 325.1 331 60.4
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 7.9e-87 324.7 344 57.0
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 7.9e-87 324.7 376 53.2
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 1.8e-86 323.6 320 56.9
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 1.8e-86 323.6 319 56.1
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 5.1e-86 322.0 314 59.6
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.5e-85 320.5 320 49.7
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 2.5e-85 319.7 339 57.8
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 3.3e-85 319.3 324 59.6
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 5.6e-85 318.5 312 60.3
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 7.4e-85 318.2 316 57.6
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 9.6e-85 317.8 325 55.7
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 1.3e-84 317.4 331 57.7
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.3e-84 317.4 319 53.3
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 4.8e-84 315.5 318 56.6
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 8.2e-84 314.7 314 59.2
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 1.1e-83 314.3 314 59.2
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 1.4e-83 313.9 320 53.1
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 2.4e-83 313.2 311 51.1
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 3.1e-83 312.8 316 59.5
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 4.0e-83 312.4 322 53.4
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 4.0e-83 312.4 326 50.0
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 6.9e-83 311.6 314 55.1
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 1.2e-82 310.8 319 55.2
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 2.0e-82 310.1 327 57.8
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 3.4e-82 309.3 341 53.4
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 4.5e-82 308.9 314 53.2
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 1.0e-81 307.8 349 49.6
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 1.3e-81 307.4 323 51.7
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 1.7e-81 307.0 319 54.5
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 2.9e-81 306.2 329 49.8
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 2.9e-81 306.2 329 57.4
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 3.8e-81 305.8 353 55.8
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 4.9e-81 305.4 320 52.8
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 1.1e-80 304.3 322 53.1
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 1.1e-80 304.3 321 53.6
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 1.9e-80 303.5 313 58.5
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 6.0e-79 298.5 330 53.0
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 2.3e-78 296.6 316 53.2
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 3.9e-78 295.8 337 57.6
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 5.1e-78 295.4 340 48.2
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 1.5e-77 293.9 314 50.0
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 2.5e-77 293.1 320 55.0
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 3.3e-77 292.7 297 54.2
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 7.4e-77 291.6 343 51.9
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 7.4e-77 291.6 319 48.0
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 4.8e-76 288.9 319 55.2
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 4.8e-76 288.9 312 58.0
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 6.3e-76 288.5 360 50.6
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 8.2e-76 288.1 350 51.4
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 1.4e-75 287.3 357 50.4
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 5.3e-75 285.4 360 49.7
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 9.0e-75 284.6 330 46.7
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 1.0e-73 281.2 321 49.2
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 1.9e-72 276.9 314 49.0
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 1.4e-70 270.8 332 51.8
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 2.3e-70 270.0 332 51.8
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 3.9e-70 269.2 321 47.7
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 5.1e-70 268.9 335 49.0
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 8.8e-70 268.1 332 51.5
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 1.5e-69 267.3 344 50.6
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 1.5e-69 267.3 344 51.2
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 3.3e-69 266.2 318 49.7
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 9.7e-69 264.6 325 52.9
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 3.7e-68 262.7 348 46.6
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 3.7e-68 262.7 348 46.6
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 3.7e-68 262.7 348 46.6
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 6.3e-68 261.9 342 50.9
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 6.3e-68 261.9 264 54.2
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 8.2e-68 261.5 348 46.6
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 1.1e-67 261.2 348 46.3
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 1.8e-67 260.4 349 49.9
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 4.1e-67 259.2 356 48.6
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 4.1e-67 259.2 347 49.3
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 6.9e-67 258.5 318 48.1
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 9.1e-67 258.1 311 42.8
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 3.4e-66 256.1 317 44.2
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 4.5e-66 255.8 326 52.1
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 4.5e-66 255.8 382 47.6
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.9e-66 255.4 311 42.8
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.9e-64 250.4 311 41.8
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 4.2e-64 249.2 305 48.9
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 2.1e-63 246.9 376 45.2
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 7.9e-63 245.0 310 51.9
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.0e-62 243.0 311 42.1
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 4.4e-61 239.2 305 43.6
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 8.5e-57 224.9 311 39.2
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 2.1e-55 220.3 263 53.2
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 1.4e-54 217.6 307 40.1
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 6.7e-54 215.3 318 42.1
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 3.6e-47 193.0 387 37.0
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.0e-46 191.4 315 39.0
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 3.3e-45 186.4 156 58.3
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 1.4e-43 181.0 351 40.5
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.6e-42 177.6 324 40.4
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 3.6e-39 166.4 125 56.0
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 4.0e-38 162.9 315 40.6
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 7.5e-37 158.7 224 40.2
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 1.6e-34 151.0 142 47.9
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 1.5e-32 144.4 125 56.0
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 4.7e-31 139.4 159 50.9
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 2.2e-28 130.6 296 31.4
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 2.4e-27 127.1 309 28.8
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 9.2e-27 125.2 322 28.3
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 2.0e-26 124.0 298 28.5
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 6.8e-22 109.0 144 39.6
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.9e-19 100.9 101 46.5
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 5.2e-14 82.8 154 34.4
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 9.8e-13 78.6 217 39.2
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 5.1e-09 66.2 54 53.7
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 1.9e-08 64.3 93 40.9


User provided reference genes

Program Settings