Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003640 Daucus carota HOM05D005934 ORTHO05D005165 1.9e-109 399.4 242 100.0
Duzib114G0889 Durio zibethinus HOM05D005934 ORTHO05D005165 6.9e-75 284.6 232 68.1
Atru.chr12.720 Acer truncatum HOM05D005934 ORTHO05D005165 1.3e-73 280.4 232 69.4
QL08p056591 Quercus lobata HOM05D005934 ORTHO05D005165 1.7e-73 280.0 222 70.3
COL.COLO4_23717 Corchorus olitorius HOM05D005934 ORTHO05D005165 2.2e-73 279.6 233 67.4
Gohir.D05G297500 Gossypium hirsutum HOM05D005934 ORTHO05D005165 2.2e-73 279.6 234 66.2
Gorai.009G314800 Gossypium raimondii HOM05D005934 ORTHO05D005165 4.9e-73 278.5 234 65.8
Thecc.10G070000 Theobroma cacao HOM05D005934 ORTHO05D005165 4.9e-73 278.5 232 68.1
Prupe.2G216000 Prunus persica HOM05D005934 ORTHO05D005165 6.4e-73 278.1 232 67.2
Gohir.D04G084700 Gossypium hirsutum HOM05D005934 ORTHO05D005165 8.4e-73 277.7 237 67.1
Nitab4.5_0008994g0010 Nicotiana tabacum HOM05D005934 ORTHO05D005165 1.4e-72 276.9 233 67.4
AL8G25010 Arabidopsis lyrata HOM05D005934 ORTHO05D005165 7.1e-72 274.6 233 66.5
Gohir.A05G345500 Gossypium hirsutum HOM05D005934 ORTHO05D005165 7.1e-72 274.6 237 66.7
Eucgr.G02812 Eucalyptus grandis HOM05D005934 ORTHO05D005165 9.3e-72 274.2 232 65.9
Nitab4.5_0000233g0170 Nicotiana tabacum HOM05D005934 ORTHO05D005165 9.3e-72 274.2 233 67.0
CSS0015713 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 1.2e-71 273.9 228 76.8
FvH4_7g19882 Fragaria vesca HOM05D005934 ORTHO05D005165 1.2e-71 273.9 232 66.4
A03p16560 Brassica napus HOM05D005934 ORTHO05D005165 1.6e-71 273.5 221 68.3
BraA03t10943Z Brassica rapa HOM05D005934 ORTHO05D005165 1.6e-71 273.5 221 68.3
RcHm_v2.0_Chr1g0363881 Rosa chinensis HOM05D005934 ORTHO05D005165 1.6e-71 273.5 228 71.1
arahy.Tifrunner.gnm1.ann1.H195MC Arachis hypogaea HOM05D005934 ORTHO05D005165 2.1e-71 273.1 228 68.0
MD01G1111100 Malus domestica HOM05D005934 ORTHO05D005165 2.7e-71 272.7 232 66.4
Phvul.007G092600 Phaseolus vulgaris HOM05D005934 ORTHO05D005165 2.7e-71 272.7 233 67.4
FAN03G0840 Fragaria x ananassa HOM05D005934 ORTHO05D005165 4.6e-71 271.9 232 65.5
TWI38G0616 Tripterygium wilfordii HOM05D005934 ORTHO05D005165 4.6e-71 271.9 230 68.3
Gohir.A05G297600 Gossypium hirsutum HOM05D005934 ORTHO05D005165 6.0e-71 271.6 234 64.1
FAN10G0472 Fragaria x ananassa HOM05D005934 ORTHO05D005165 7.9e-71 271.2 232 66.4
FAN01G0846 Fragaria x ananassa HOM05D005934 ORTHO05D005165 1.0e-70 270.8 232 65.5
FAN01G1479 Fragaria x ananassa HOM05D005934 ORTHO05D005165 1.0e-70 270.8 232 65.5
C03p19490 Brassica napus HOM05D005934 ORTHO05D005165 1.3e-70 270.4 228 65.8
BolC3t14330H Brassica oleracea HOM05D005934 ORTHO05D005165 1.3e-70 270.4 228 65.8
CARHR257410 Cardamine hirsuta HOM05D005934 ORTHO05D005165 1.3e-70 270.4 233 66.1
PGR142G2623 Punica granatum HOM05D005934 ORTHO05D005165 1.3e-70 270.4 234 65.0
CSS0026746 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 1.8e-70 270.0 221 68.3
ClCG09G020550 Citrullus lanatus HOM05D005934 ORTHO05D005165 2.3e-70 269.6 229 65.9
Haze_16922 Corylus avellana HOM05D005934 ORTHO05D005165 3.0e-70 269.2 226 67.3
Thhalv10013687m.g Eutrema salsugineum HOM05D005934 ORTHO05D005165 3.9e-70 268.9 221 67.4
Lj5g0021458 Lotus japonicus HOM05D005934 ORTHO05D005165 6.7e-70 268.1 227 67.8
Solyc04g047750.3 Solanum lycopersicum HOM05D005934 ORTHO05D005165 6.7e-70 268.1 229 66.8
TPR.G1756 Trifolium pratense HOM05D005934 ORTHO05D005165 6.7e-70 268.1 228 66.7
Carub.0008s1083 Capsella rubella HOM05D005934 ORTHO05D005165 1.1e-69 267.3 221 67.0
Sp6g12980 Schrenkiella parvula HOM05D005934 ORTHO05D005165 1.1e-69 267.3 221 67.4
CANSAT56G0550 Cannabis sativa HOM05D005934 ORTHO05D005165 2.5e-69 266.2 233 65.7
Sopen04g017890 Solanum pennellii HOM05D005934 ORTHO05D005165 2.5e-69 266.2 220 67.7
Aqoxy2G01769 Aquilegia oxysepala HOM05D005934 ORTHO05D005165 3.3e-69 265.8 232 63.4
PSO339G5008 Papaver somniferum HOM05D005934 ORTHO05D005165 3.3e-69 265.8 232 64.7
AT5G50840 Arabidopsis thaliana HOM05D005934 ORTHO05D005165 4.3e-69 265.4 233 63.9
Medtr1g095640 Medicago truncatula HOM05D005934 ORTHO05D005165 2.1e-68 263.1 228 66.2
Sed0003296 Sechium edule HOM05D005934 ORTHO05D005165 4.8e-68 261.9 227 66.1
BcaC03g14634 Brassica carinata HOM05D005934 ORTHO05D005165 6.2e-68 261.5 224 64.7
C02p20680 Brassica napus HOM05D005934 ORTHO05D005165 1.4e-67 260.4 224 64.7
BolC2t08210H Brassica oleracea HOM05D005934 ORTHO05D005165 1.4e-67 260.4 224 64.7
Ca_10584_v3 Cicer arietinum L. HOM05D005934 ORTHO05D005165 9.0e-67 257.7 228 64.5
Ciclev10031457m.g Citrus clementina HOM05D005934 ORTHO05D005165 5.8e-66 255.0 235 68.5
PSO541G4936 Papaver somniferum HOM05D005934 ORTHO05D005165 7.6e-66 254.6 228 63.2
arahy.Tifrunner.gnm1.ann1.W2M3W6 Arachis hypogaea HOM05D005934 ORTHO05D005165 1.0e-65 254.2 229 65.1
Glyma.20G178100 Glycine max HOM05D005934 ORTHO05D005165 1.0e-65 254.2 233 63.1
CiPaw.02G175500 Carya illinoinensis HOM05D005934 ORTHO05D005165 1.7e-65 253.4 230 63.9
CAN.G471.3 Capsicum annuum HOM05D005934 ORTHO05D005165 8.4e-65 251.1 232 62.1
Cc02_g11420 Coffea canephora HOM05D005934 ORTHO05D005165 8.4e-65 251.1 232 62.1
BcaB05g24030 Brassica carinata HOM05D005934 ORTHO05D005165 1.1e-64 250.8 228 61.8
A02p12610 Brassica napus HOM05D005934 ORTHO05D005165 2.5e-64 249.6 226 62.8
ATR0759G024 Amborella trichopoda HOM05D005934 ORTHO05D005165 3.2e-64 249.2 231 61.0
BraA02t06319Z Brassica rapa HOM05D005934 ORTHO05D005165 4.2e-64 248.8 228 61.0
Oeu043928.1 Olea europaea HOM05D005934 ORTHO05D005165 9.3e-64 247.7 233 71.7
Psat6g182920 Pisum sativum HOM05D005934 ORTHO05D005165 2.1e-63 246.5 228 68.4
Lalb_Chr02g0141961 Lupinus albus HOM05D005934 ORTHO05D005165 5.1e-62 241.9 228 68.9
Os03g0288600 Oryza sativa ssp. japonica HOM05D005934 ORTHO05D005165 8.7e-62 241.1 225 56.9
TAR636G3344 Trochodendron aralioides HOM05D005934 ORTHO05D005165 1.5e-61 240.4 228 68.9
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 7.4e-61 238.0 199 66.8
Dinv31355 Davidia involucrata HOM05D005934 ORTHO05D005165 2.1e-60 236.5 232 69.0
Migut.F01993 Erythranthe guttata HOM05D005934 ORTHO05D005165 1.8e-59 233.4 228 61.8
unitig_899.g14449 Utricularia gibba HOM05D005934 ORTHO05D005165 1.8e-59 233.4 232 58.2
MSTRG.27465 Avicennia marina HOM05D005934 ORTHO05D005165 5.3e-59 231.9 233 59.7
EL10Ac2g03586 Beta vulgaris HOM05D005934 ORTHO05D005165 9.0e-59 231.1 284 51.8
MD07G1177300 Malus domestica HOM05D005934 ORTHO05D005165 1.2e-58 230.7 232 59.1
Ah.11g043450 Amaranthus hybridus HOM05D005934 ORTHO05D005165 1.5e-58 230.3 232 59.1
CSS0046829 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 4.5e-58 228.8 221 60.6
Manes.10G044200 Manihot esculenta HOM05D005934 ORTHO05D005165 4.5e-58 228.8 229 60.3
GSVIVG01016314001 Vitis vinifera HOM05D005934 ORTHO05D005165 5.8e-58 228.4 228 69.7
TWI63G0603 Tripterygium wilfordii HOM05D005934 ORTHO05D005165 1.0e-57 227.6 230 58.7
Zm00001eb397090 Zea mays HOM05D005934 ORTHO05D005165 2.2e-57 226.5 226 54.4
Cpa.g.sc53.46 Carica papaya HOM05D005934 ORTHO05D005165 3.8e-57 225.7 234 59.4
vmacro07085 Vaccinium macrocarpon HOM05D005934 ORTHO05D005165 1.1e-56 224.2 358 45.0
Zm00001eb013240 Zea mays HOM05D005934 ORTHO05D005165 1.1e-56 224.2 226 63.3
Sc09g0006590 Simmondsia chinensis HOM05D005934 ORTHO05D005165 6.1e-55 218.4 226 57.5
THA.LOC104819151 Tarenaya hassleriana HOM05D005934 ORTHO05D005165 1.1e-53 214.2 224 66.5
Lj1C919T16 Lonicera japonica HOM05D005934 ORTHO05D005165 2.6e-50 203.0 228 55.3
SGA_v2.0_scaffold13G06359 Striga asiatica HOM05D005934 ORTHO05D005165 5.0e-49 198.7 233 53.2
Gorai.012G094400 Gossypium raimondii HOM05D005934 ORTHO05D005165 7.2e-48 194.9 146 72.6
Potri.010G219700 Populus trichocarpa HOM05D005934 ORTHO05D005165 3.6e-47 192.6 232 61.6
Sabra10G0169500 Salix brachista HOM05D005934 ORTHO05D005165 6.1e-47 191.8 232 61.6
Hund19343 Selenicereus undatus HOM05D005934 ORTHO05D005165 2.3e-46 189.9 222 51.8
TAR633G0441 Trochodendron aralioides HOM05D005934 ORTHO05D005165 3.3e-45 186.0 231 60.2
Dinv11795 Davidia involucrata HOM05D005934 ORTHO05D005165 9.7e-45 184.5 232 61.2
Aa31LG3G7310 Aethionema arabicum HOM05D005934 ORTHO05D005165 2.8e-44 183.0 220 61.4
ECA238G0735 Erigeron canadensis HOM05D005934 ORTHO05D005165 1.4e-43 180.6 232 59.1
SMO201G0134 Selaginella moellendorffii HOM05D005934 ORTHO05D005165 2.0e-42 176.8 232 45.7
MELO3C002886.2 Cucumis melo HOM05D005934 ORTHO05D005165 2.6e-42 176.4 228 58.8
HanXRQChr11g0323311 Helianthus annuus HOM05D005934 ORTHO05D005165 5.9e-42 175.3 228 58.8
HanXRQChr14g0457271 Helianthus annuus HOM05D005934 ORTHO05D005165 2.9e-41 172.9 228 59.2
MBI05_g20541_MAGBIO Magnolia biondii HOM05D005934 ORTHO05D005165 3.2e-40 169.5 224 58.5
CsaV3_5G025820 Cucumis sativus L. HOM05D005934 ORTHO05D005165 5.5e-40 168.7 228 57.5
Aa31LG3G7290 Aethionema arabicum HOM05D005934 ORTHO05D005165 7.2e-40 168.3 139 64.0
AUR62027949 Chenopodium quinoa HOM05D005934 ORTHO05D005165 4.1e-35 152.5 190 49.5
Mapoly0007s0101 Marchantia polymorpha HOM05D005934 ORTHO05D005165 2.0e-34 150.2 236 42.8
Lsat_1_v5_gn_2_113761 Lactuca sativa HOM05D005934 ORTHO05D005165 2.6e-34 149.8 221 57.9
CBR_g15990 Chara braunii HOM05D005934 ORTHO05D005165 4.5e-34 149.1 228 41.2
THA.LOC104819150 Tarenaya hassleriana HOM05D005934 ORTHO05D005165 1.7e-33 147.1 177 64.4
AUR62020763 Chenopodium quinoa HOM05D005934 ORTHO05D005165 5.0e-33 145.6 233 45.1
Hund22502 Selenicereus undatus HOM05D005934 ORTHO05D005165 1.3e-28 131.0 232 50.9
Actinidia38257 Actinidia chinensis HOM05D005934 ORTHO05D005165 8.2e-28 128.3 191 57.6
Pp3c11_23150 Physcomitrium patens HOM05D005934 ORTHO05D005165 7.7e-26 121.7 225 43.6
Lsat_1_v5_gn_1_128800 Lactuca sativa HOM05D005934 ORTHO05D005165 2.2e-25 120.2 195 57.4
Peaxi162Scf00108g01212 Petunia axillaris HOM05D005934 ORTHO05D005165 5.4e-19 99.0 158 56.3
Actinidia03038 Actinidia chinensis HOM05D005934 ORTHO05D005165 3.8e-17 92.8 153 56.9
Nn2g10703 Nelumbo nucifera HOM05D005934 ORTHO05D005165 2.5e-16 90.1 60 80.0
SalBow4G0998 Salvia bowleyana HOM05D011515 ORTHO05D005165 4.0e-14 82.8 67 64.2
SalBow4G2489 Salvia bowleyana HOM05D011515 ORTHO05D005165 4.0e-14 82.8 67 64.2
Cre12.g546300 Chlamydomonas reinhardtii HOM05D005934 ORTHO05D005165 2.9e-09 66.6 233 28.3
HPP92_006751 Vanilla planifolia HOM05D005934 ORTHO05D005165 3.3e-08 63.2 45 73.3
MCO09G455 Micromonas commoda HOM05D005934 ORTHO05D005165 1.2e-07 61.2 216 28.7
HPP92_006750 Vanilla planifolia HOM05D005934 ORTHO05D005165 8.9e-06 55.1 36 69.4


User provided reference genes

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