Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 1.7e-88 329.3 168 100.0
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 1.1e-31 140.6 167 46.7
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 2.5e-31 139.4 168 49.4
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 7.2e-31 137.9 167 47.3
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 9.4e-31 137.5 164 45.7
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 8.0e-30 134.4 175 46.3
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 8.0e-30 134.4 170 47.6
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 8.0e-30 134.4 186 44.1
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 8.0e-30 134.4 169 47.9
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 1.8e-29 133.3 159 49.7
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 2.3e-29 132.9 163 47.2
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 2.3e-29 132.9 172 47.7
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 2.3e-29 132.9 167 46.1
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 5.2e-29 131.7 176 44.3
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 1.2e-28 130.6 175 48.0
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.2e-28 130.6 184 43.5
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 1.5e-28 130.2 162 46.3
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 2.0e-28 129.8 180 42.8
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 2.6e-28 129.4 165 46.7
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 2.6e-28 129.4 165 46.7
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 2.6e-28 129.4 164 47.6
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 9.8e-28 127.5 165 46.1
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 9.8e-28 127.5 165 46.1
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 1.7e-27 126.7 175 46.3
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 2.2e-27 126.3 173 44.5
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 2.8e-27 125.9 165 46.1
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 6.3e-27 124.8 168 45.8
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 1.1e-26 124.0 168 44.0
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 1.4e-26 123.6 165 46.7
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 1.4e-26 123.6 170 45.9
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 1.8e-26 123.2 173 44.5
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 1.8e-26 123.2 165 44.8
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 3.1e-26 122.5 209 37.8
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 3.1e-26 122.5 166 43.4
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 4.1e-26 122.1 170 44.1
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.2e-25 120.6 172 43.0
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 1.6e-25 120.2 165 45.5
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 2.7e-25 119.4 165 46.7
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 5.9e-25 118.2 165 44.8
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 2.9e-24 115.9 175 42.3
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 1.1e-23 114.0 165 40.0
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 3.2e-23 112.5 190 41.1
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 7.2e-23 111.3 167 41.9
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 2.7e-22 109.4 192 40.1
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 6.1e-22 108.2 152 45.4
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 1.5e-20 103.6 155 43.2
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 7.5e-20 101.3 149 43.0
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 6.3e-19 98.2 160 41.2
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 8.3e-19 97.8 168 39.9
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 5.4e-18 95.1 167 38.9
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 3.8e-16 89.0 147 42.2
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 6.6e-16 88.2 115 45.2
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 1.1e-15 87.4 173 33.5
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 2.5e-15 86.3 80 57.5
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 7.3e-15 84.7 163 36.2
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 6.8e-13 78.2 70 54.3
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 1.3e-11 73.9 192 29.7
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 2.2e-11 73.2 160 33.1
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 6.6e-08 61.6 41 63.4
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 2.1e-06 56.6 37 67.6
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 3.6e-06 55.8 77 44.2


User provided reference genes

Program Settings