Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 1.0e-96 356.7 174 100.0
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 2.3e-27 126.3 196 44.9
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 5.0e-27 125.2 197 45.2
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 8.6e-27 124.4 205 42.0
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.5e-26 122.9 208 41.3
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.5e-26 122.9 208 41.3
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 3.3e-26 122.5 218 41.7
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 4.2e-26 122.1 188 45.7
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 7.2e-26 121.3 213 41.8
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 7.2e-26 121.3 208 40.9
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 5.2e-24 115.2 198 42.4
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 5.2e-24 115.2 200 43.5
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 3.4e-23 112.5 195 41.0
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 5.7e-23 111.7 218 37.6
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 9.8e-23 110.9 204 39.7
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 9.8e-23 110.9 187 41.2
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 1.3e-22 110.5 195 41.0
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 3.7e-22 109.0 185 41.6
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 6.3e-22 108.2 204 39.7
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 1.1e-21 107.5 232 35.8
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 2.4e-21 106.3 210 41.0
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.4e-21 106.3 201 41.8
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 2.4e-21 106.3 205 40.0
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 3.1e-21 105.9 197 40.6
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 3.1e-21 105.9 213 41.3
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 5.4e-21 105.1 232 37.1
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 5.4e-21 105.1 236 36.4
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 9.2e-21 104.4 177 44.1
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 1.6e-20 103.6 236 36.4
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 2.0e-20 103.2 236 36.4
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 2.0e-20 103.2 199 40.2
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 2.7e-20 102.8 232 35.3
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.7e-20 102.8 199 41.2
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 2.7e-20 102.8 192 41.7
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 3.5e-20 102.4 203 40.4
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 4.5e-20 102.1 198 36.4
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 7.8e-20 101.3 240 35.8
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 7.8e-20 101.3 201 42.3
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 1.0e-19 100.9 200 40.0
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 1.0e-19 100.9 175 42.3
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 1.7e-19 100.1 207 36.2
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 2.3e-19 99.8 199 40.7
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 2.9e-19 99.4 194 38.1
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 3.8e-19 99.0 233 35.6
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 3.8e-19 99.0 196 36.7
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 6.6e-19 98.2 237 34.6
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 6.6e-19 98.2 194 38.1
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 1.5e-18 97.1 236 34.7
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 3.3e-18 95.9 198 38.4
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 4.3e-18 95.5 181 40.9
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 5.6e-18 95.1 213 37.6
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 5.6e-18 95.1 213 37.6
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 5.6e-18 95.1 214 36.4
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 7.3e-18 94.7 191 40.8
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 9.5e-18 94.4 228 35.1
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 9.5e-18 94.4 184 37.5
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 1.2e-17 94.0 192 39.6
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.8e-17 92.8 186 39.8
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 6.1e-17 91.7 207 36.2
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 6.1e-17 91.7 231 32.9
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 8.0e-17 91.3 192 38.5
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 1.0e-16 90.9 189 38.1
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 1.0e-16 90.9 189 38.1
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 1.4e-16 90.5 196 37.2
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.4e-16 90.5 175 41.1
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 4.0e-16 89.0 187 36.4
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 5.2e-16 88.6 186 38.2
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 8.9e-16 87.8 235 33.6
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 1.2e-15 87.4 230 36.5
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 2.6e-15 86.3 213 37.6
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 2.6e-15 86.3 191 38.7
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 3.4e-15 85.9 208 38.9
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 5.8e-15 85.1 184 37.5
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 5.8e-15 85.1 158 39.2
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 3.7e-14 82.4 196 35.2
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 4.9e-14 82.0 182 40.1
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 4.9e-14 82.0 194 34.5
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 1.4e-13 80.5 196 34.7
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 1.8e-13 80.1 182 36.8
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 2.4e-13 79.7 231 32.0
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 2.4e-13 79.7 229 32.3
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 5.4e-13 78.6 225 35.1
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 1.3e-11 73.9 208 32.7
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 1.3e-11 73.9 169 36.1
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 1.7e-11 73.6 191 33.0
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 3.9e-11 72.4 185 34.1
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 1.1e-10 70.9 95 45.3
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 2.5e-10 69.7 156 36.5
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 3.3e-10 69.3 156 35.3
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 5.6e-10 68.6 192 33.9
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.1e-09 66.6 169 35.5
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 2.8e-09 66.2 199 32.7
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 2.8e-09 66.2 181 32.6
A02p21250 Brassica napus HOM05D007332 ORTHO05D009297 3.6e-09 65.9 223 33.2
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 1.1e-08 64.3 201 32.8
THA.LOC104800214 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 2.6e-07 59.7 145 36.6
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 1.7e-06 57.0 149 33.6
AT1G21695 Arabidopsis thaliana HOM05D011160 ORTHO05D013203 3.7e-06 55.8 204 30.9


User provided reference genes

Program Settings