Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003540 Daucus carota HOM05D005585 ORTHO05D006905 3.0e-190 668.3 325 100.0
Dinv20235 Davidia involucrata HOM05D005585 ORTHO05D006905 3.7e-124 448.7 304 71.1
Hma1.2p1_0163F.1_g072970 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 7.0e-123 444.5 300 72.3
CSS0043300 Camellia sinensis var. sinensis HOM05D005585 ORTHO05D006905 9.4e-120 434.1 285 72.3
HanXRQChr06g0178071 Helianthus annuus HOM05D005585 ORTHO05D006905 3.4e-117 425.6 285 71.9
Cc04_g06090 Coffea canephora HOM05D005585 ORTHO05D006905 5.7e-117 424.9 331 62.8
PGSC0003DMG400005757 Solanum tuberosum HOM05D005585 ORTHO05D006905 1.3e-116 423.7 329 63.2
Ciclev10015784m.g Citrus clementina HOM05D005585 ORTHO05D006905 1.7e-116 423.3 280 71.1
CiPaw.15G144600 Carya illinoinensis HOM05D005585 ORTHO05D006905 2.8e-116 422.5 330 66.7
TAR628G0421 Trochodendron aralioides HOM05D005585 ORTHO05D006905 4.1e-115 418.7 328 64.6
Lsat_1_v5_gn_8_83620 Lactuca sativa HOM05D005585 ORTHO05D006905 2.0e-114 416.4 286 71.3
QL10p030702 Quercus lobata HOM05D005585 ORTHO05D006905 2.7e-114 416.0 301 67.8
Manes.06G004600 Manihot esculenta HOM05D005585 ORTHO05D006905 4.5e-114 415.2 291 69.8
ECA236G2254 Erigeron canadensis HOM05D005585 ORTHO05D006905 1.3e-113 413.7 287 69.0
Thecc.03G059000 Theobroma cacao HOM05D005585 ORTHO05D006905 1.7e-113 413.3 302 68.2
Potri.012G045200 Populus trichocarpa HOM05D005585 ORTHO05D006905 5.0e-113 411.8 309 65.4
Nitab4.5_0001264g0050 Nicotiana tabacum HOM05D005585 ORTHO05D006905 8.5e-113 411.0 302 65.9
Gohir.A09G175000 Gossypium hirsutum HOM05D005585 ORTHO05D006905 1.5e-112 410.2 317 64.0
Prupe.5G234900 Prunus persica HOM05D005585 ORTHO05D006905 2.5e-112 409.5 296 66.2
COL.COLO4_28892 Corchorus olitorius HOM05D005585 ORTHO05D006905 4.7e-111 405.2 291 67.4
Aqoxy5G00867 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 6.1e-111 404.8 308 67.9
Glyma.07G103200 Glycine max HOM05D005585 ORTHO05D006905 6.1e-111 404.8 296 67.6
RcHm_v2.0_Chr7g0178161 Rosa chinensis HOM05D005585 ORTHO05D006905 6.1e-111 404.8 295 66.8
PGR044G1909 Punica granatum HOM05D005585 ORTHO05D006905 1.4e-110 403.7 306 63.4
Duzib068G1453 Durio zibethinus HOM05D005585 ORTHO05D006905 1.8e-110 403.3 306 64.4
FAN08G0665 Fragaria x ananassa HOM05D005585 ORTHO05D006905 8.8e-110 401.0 295 65.8
CANSAT80G2587 Cannabis sativa HOM05D005585 ORTHO05D006905 1.2e-109 400.6 294 67.7
Gorai.006G191400 Gossypium raimondii HOM05D005585 ORTHO05D006905 2.0e-109 399.8 317 62.8
GSVIVG01008457001 Vitis vinifera HOM05D005585 ORTHO05D006905 2.0e-109 399.8 296 66.9
CANSAT80G1087 Cannabis sativa HOM05D005585 ORTHO05D006905 2.6e-109 399.4 294 67.7
arahy.Tifrunner.gnm1.ann1.8TLB5V Arachis hypogaea HOM05D005585 ORTHO05D006905 3.4e-109 399.1 279 69.5
TWI60G0738 Tripterygium wilfordii HOM05D005585 ORTHO05D006905 3.4e-109 399.1 328 61.3
MD06G1228400 Malus domestica HOM05D005585 ORTHO05D006905 4.4e-109 398.7 283 69.3
Rhsim08G0150200 Rhododendron simsii HOM05D005585 ORTHO05D006905 4.4e-109 398.7 276 68.8
Solyc03g118610.4 Solanum lycopersicum HOM05D005585 ORTHO05D006905 2.8e-108 396.0 335 59.4
FvH4_5g17500 Fragaria vesca HOM05D005585 ORTHO05D006905 8.3e-108 394.4 295 65.1
Phvul.004G149700 Phaseolus vulgaris HOM05D005585 ORTHO05D006905 1.1e-107 394.0 314 63.4
SalBow7G1179 Salvia bowleyana HOM05D005585 ORTHO05D006905 5.4e-107 391.7 307 60.9
Oeu026263.1 Olea europaea HOM05D005585 ORTHO05D006905 9.2e-107 391.0 309 64.7
Sopen03g037560 Solanum pennellii HOM05D005585 ORTHO05D006905 9.2e-107 391.0 311 62.1
MSTRG.6190 Avicennia marina HOM05D005585 ORTHO05D006905 1.6e-106 390.2 328 58.5
Nn5g30598 Nelumbo nucifera HOM05D005585 ORTHO05D006905 2.7e-106 389.4 308 64.0
PSO170G1171 Papaver somniferum HOM05D005585 ORTHO05D006905 2.7e-106 389.4 311 63.0
CsaV3_1G007220 Cucumis sativus L. HOM05D005585 ORTHO05D006905 3.5e-106 389.0 295 63.1
PSO017G0826 Papaver somniferum HOM05D005585 ORTHO05D006905 3.5e-106 389.0 310 62.9
Lalb_Chr14g0370621 Lupinus albus HOM05D005585 ORTHO05D006905 5.9e-106 388.3 303 63.0
Haze_18886 Corylus avellana HOM05D005585 ORTHO05D006905 2.9e-105 386.0 306 62.1
Medtr6g069850 Medicago truncatula HOM05D005585 ORTHO05D006905 3.8e-105 385.6 298 63.8
Psat1g030240 Pisum sativum HOM05D005585 ORTHO05D006905 3.8e-105 385.6 323 59.8
Lj2g0015776 Lotus japonicus HOM05D005585 ORTHO05D006905 5.0e-105 385.2 302 63.9
MD14G1237600 Malus domestica HOM05D005585 ORTHO05D006905 5.0e-105 385.2 295 64.4
BcaB06g25853 Brassica carinata HOM05D005585 ORTHO05D006905 8.6e-105 384.4 305 62.6
BcaC05g28739 Brassica carinata HOM05D005585 ORTHO05D006905 1.5e-104 383.6 306 62.1
BolC5t33576H Brassica oleracea HOM05D005585 ORTHO05D006905 1.5e-104 383.6 306 62.1
MELO3C002139.2 Cucumis melo HOM05D005585 ORTHO05D006905 2.5e-104 382.9 295 61.7
Lalb_Chr22g0353511 Lupinus albus HOM05D005585 ORTHO05D006905 3.3e-104 382.5 294 65.6
Hund22311 Selenicereus undatus HOM05D005585 ORTHO05D006905 4.3e-104 382.1 347 57.6
Ca_25346_v3 Cicer arietinum L. HOM05D005585 ORTHO05D006905 9.5e-104 380.9 323 60.1
Eucgr.B00886 Eucalyptus grandis HOM05D005585 ORTHO05D006905 9.5e-104 380.9 294 63.3
Migut.I00267 Erythranthe guttata HOM05D005585 ORTHO05D006905 2.1e-103 379.8 337 56.4
Sed0009200 Sechium edule HOM05D005585 ORTHO05D006905 2.1e-103 379.8 287 63.1
TPR.G8624 Trifolium pratense HOM05D005585 ORTHO05D006905 2.1e-103 379.8 312 61.9
Sp3g16030 Schrenkiella parvula HOM05D005585 ORTHO05D006905 2.8e-103 379.4 297 63.0
BraA01t03712Z Brassica rapa HOM05D005585 ORTHO05D006905 3.6e-103 379.0 322 59.3
A01p36480 Brassica napus HOM05D005585 ORTHO05D006905 8.0e-103 377.9 323 59.8
Lj5C159G17 Lonicera japonica HOM05D005585 ORTHO05D006905 8.0e-103 377.9 241 75.9
C05p48400 Brassica napus HOM05D005585 ORTHO05D006905 1.4e-102 377.1 313 61.0
BcaC09g48755 Brassica carinata HOM05D005585 ORTHO05D006905 1.8e-102 376.7 308 61.0
THA.LOC104821828 Tarenaya hassleriana HOM05D005585 ORTHO05D006905 5.2e-102 375.2 298 61.7
Aa31LG8G4780 Aethionema arabicum HOM05D005585 ORTHO05D006905 6.8e-102 374.8 306 60.5
AUR62001019 Chenopodium quinoa HOM05D005585 ORTHO05D006905 2.6e-101 372.9 276 65.6
C01p46240 Brassica napus HOM05D005585 ORTHO05D006905 5.7e-101 371.7 310 60.6
BolC1t04585H Brassica oleracea HOM05D005585 ORTHO05D006905 5.7e-101 371.7 310 60.6
Thhalv10021015m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 5.7e-101 371.7 336 56.8
arahy.Tifrunner.gnm1.ann1.E1YKD2 Arachis hypogaea HOM05D005585 ORTHO05D006905 7.5e-101 371.3 263 68.4
ClCG04G010560 Citrullus lanatus HOM05D005585 ORTHO05D006905 7.5e-101 371.3 323 58.8
BraA05t22021Z Brassica rapa HOM05D005585 ORTHO05D006905 9.8e-101 370.9 313 59.7
CARHR093240 Cardamine hirsuta HOM05D005585 ORTHO05D006905 9.8e-101 370.9 339 57.5
A05p31890 Brassica napus HOM05D005585 ORTHO05D006905 1.3e-100 370.5 305 60.3
vmacro08951 Vaccinium macrocarpon HOM05D005585 ORTHO05D006905 1.7e-100 370.2 338 56.5
ATR1153G069 Amborella trichopoda HOM05D005585 ORTHO05D006905 2.2e-100 369.8 311 58.5
AL3G31080 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 8.3e-100 367.9 289 61.9
Nitab4.5_0010397g0010 Nicotiana tabacum HOM05D005585 ORTHO05D006905 1.1e-99 367.5 269 64.7
AT3G17910 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 9.2e-99 364.4 291 61.2
Carub.0003s1764 Capsella rubella HOM05D005585 ORTHO05D006905 1.2e-98 364.0 287 61.3
Sabra12G0031400 Salix brachista HOM05D005585 ORTHO05D006905 1.2e-98 364.0 298 60.4
Sc12g0007980 Simmondsia chinensis HOM05D005585 ORTHO05D006905 4.6e-98 362.1 277 62.5
Peaxi162Scf00314g00335 Petunia axillaris HOM05D005585 ORTHO05D006905 7.8e-98 361.3 253 68.8
FAN04G2668 Fragaria x ananassa HOM05D005585 ORTHO05D006905 6.6e-97 358.2 273 63.0
BcaB04g20808 Brassica carinata HOM05D005585 ORTHO05D006905 1.9e-96 356.7 325 56.6
FAN18G2151 Fragaria x ananassa HOM05D005585 ORTHO05D006905 9.5e-96 354.4 273 62.6
Aqoxy5G00865 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 3.6e-95 352.4 256 68.4
EL10Ac4g09125 Beta vulgaris HOM05D005585 ORTHO05D006905 4.0e-94 349.0 298 58.7
CDE04G0750 Ceratophyllum demersum HOM05D001130 ORTHO05D006905 2.0e-93 346.7 336 53.6
Glyma.09G174400 Glycine max HOM05D005585 ORTHO05D006905 2.6e-93 346.3 247 67.6
Os03g0200700 Oryza sativa ssp. japonica HOM05D005585 ORTHO05D006905 2.9e-92 342.8 299 57.9
VMungo0464G1491 Vigna mungo HOM05D005585 ORTHO05D006905 1.4e-91 340.5 241 69.3
CAN.G843.48 Capsicum annuum HOM05D005585 ORTHO05D006905 6.0e-90 335.1 300 57.7
unitig_27.g25108 Utricularia gibba HOM05D005585 ORTHO05D006905 1.0e-89 334.3 286 57.7
TAR628G1367 Trochodendron aralioides HOM05D005585 ORTHO05D006905 3.9e-89 332.4 253 66.4
Hma1.2p1_0163F.1_g072980 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 8.1e-87 324.7 225 70.7
HPP92_019169 Vanilla planifolia HOM05D005585 ORTHO05D006905 1.8e-86 323.6 290 56.6
Ah.06g192310 Amaranthus hybridus HOM05D005585 ORTHO05D008527 3.5e-82 309.3 239 62.8
Zm00001eb007820 Zea mays HOM05D005585 ORTHO05D006905 6.0e-82 308.5 258 60.5
QL12p007232 Quercus lobata HOM05D005585 ORTHO05D006905 7.3e-80 301.6 399 44.9
Cpa.g.c34889 Carica papaya HOM05D005585 ORTHO05D006905 4.7e-79 298.9 219 67.6
AUR62004935 Chenopodium quinoa HOM05D005585 ORTHO05D006905 2.4e-75 286.6 221 64.3
Eucgr.B00986 Eucalyptus grandis HOM05D005585 ORTHO05D006905 1.3e-65 254.2 196 63.8
Mapoly0094s0071 Marchantia polymorpha HOM05D005585 ORTHO05D006905 5.1e-65 252.3 352 40.3
Gohir.D09G170128 Gossypium hirsutum HOM05D005585 ORTHO05D006905 3.8e-60 236.1 175 65.7
SMO147G0391 Selaginella moellendorffii HOM05D005585 ORTHO05D006905 3.8e-60 236.1 289 42.6
CARHR038140 Cardamine hirsuta HOM05D005585 ORTHO05D006905 2.4e-59 233.4 319 42.6
AL1G55160 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 4.2e-59 232.6 302 42.1
Pp3c5_4480 Physcomitrium patens HOM05D005585 ORTHO05D006905 4.6e-58 229.2 345 38.0
Thhalv10011732m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 4.5e-53 212.6 256 43.4
SGA_v2.0_scaffold58G20371 Striga asiatica HOM05D005585 ORTHO05D006905 4.5e-53 212.6 191 55.0
Cpa.g.sc3.377 Carica papaya HOM05D005585 ORTHO05D006905 5.8e-53 212.2 303 43.6
AT1G48510 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 3.8e-52 209.5 310 38.4
Carub.0001s3763 Capsella rubella HOM05D005585 ORTHO05D006905 9.6e-48 194.9 271 39.9
Carub.0001s3764 Capsella rubella HOM05D005585 ORTHO05D006905 1.6e-47 194.1 296 38.2
AagrBONN_evm.TU.Sc2ySwM_340.176 Anthoceros agrestis HOM05D005585 ORTHO05D006905 3.7e-47 193.0 249 41.4
BcaB04g20806 Brassica carinata HOM05D005585 ORTHO05D006905 2.2e-44 183.7 174 53.4
SEGI_34948 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 9.3e-43 178.3 155 56.8
CBR_g50834 Chara braunii HOM05D002601 ORTHO05D002884 4.6e-42 176.0 382 29.1
PRCOL_00002102 Prasinoderma coloniale HOM05D005585 ORTHO05D006905 1.5e-40 171.0 330 32.4
BcaB08g34867 Brassica carinata HOM05D005585 ORTHO05D006905 9.6e-40 168.3 233 38.6
TAR628G1286 Trochodendron aralioides HOM05D005585 ORTHO05D006905 3.1e-38 163.3 131 61.1
Zm00001eb338430 Zea mays HOM05D005585 ORTHO05D006905 1.4e-35 154.5 92 73.9
Gohir.D09G170071 Gossypium hirsutum HOM05D005585 ORTHO05D006905 5.5e-35 152.5 128 58.6
SEGI_19570 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 5.1e-33 146.0 132 56.8
FAN13G1174 Fragaria x ananassa HOM05D005585 ORTHO05D006905 3.3e-32 143.3 144 52.1
Zm00001eb099110 Zea mays HOM05D005585 ORTHO05D006905 1.1e-27 128.3 120 53.3
Cre16.g664700 Chlamydomonas reinhardtii HOM05D005585 ORTHO05D006905 5.9e-21 105.9 358 23.5
CBR_g629 Chara braunii HOM05D005585 ORTHO05D006905 9.7e-16 88.6 203 27.6
MCO16G342 Micromonas commoda HOM05D005585 ORTHO05D006905 4.1e-14 83.2 219 27.9
CDE07G0810 Ceratophyllum demersum HOM05D005585 ORTHO05D006905 1.2e-08 65.1 81 46.9


User provided reference genes

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