Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003510 Daucus carota HOM05D003874 ORTHO05D004545 2.6e-158 562.0 280 100.0
Dinv22112 Davidia involucrata HOM05D003874 ORTHO05D004545 1.1e-76 290.8 319 52.7
Dinv37410 Davidia involucrata HOM05D003874 ORTHO05D004545 1.7e-72 276.9 314 53.2
CSS0015095 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 4.0e-66 255.8 290 50.3
CSS0009242 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 2.0e-65 253.4 290 50.0
Cfa008075 Carpinus fangiana HOM05D003874 ORTHO05D004545 1.7e-64 250.4 337 44.5
Potri.019G071300 Populus trichocarpa HOM05D003874 ORTHO05D004545 2.8e-64 249.6 348 44.8
Duzib268G0037 Durio zibethinus HOM05D003874 ORTHO05D004545 6.3e-64 248.4 358 43.3
COL.COLO4_25146 Corchorus olitorius HOM05D003874 ORTHO05D004545 4.1e-63 245.7 371 42.0
Thecc.08G178800 Theobroma cacao HOM05D003874 ORTHO05D004545 4.1e-63 245.7 358 43.3
Actinidia29373 Actinidia chinensis HOM05D003874 ORTHO05D004545 1.6e-62 243.8 365 44.4
RcHm_v2.0_Chr6g0251151 Rosa chinensis HOM05D003874 ORTHO05D004545 2.0e-62 243.4 315 47.0
FAN20G2080 Fragaria x ananassa HOM05D003874 ORTHO05D004545 2.7e-62 243.0 311 46.3
Rhsim12G0002900 Rhododendron simsii HOM05D003874 ORTHO05D004545 3.5e-62 242.7 328 45.7
Actinidia03528 Actinidia chinensis HOM05D003874 ORTHO05D004545 7.7e-62 241.5 361 43.2
CSS0025181 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 2.2e-61 240.0 321 48.0
Prupe.8G006800 Prunus persica HOM05D003874 ORTHO05D004545 5.0e-61 238.8 323 45.2
FAN24G1984 Fragaria x ananassa HOM05D003874 ORTHO05D004545 6.5e-61 238.4 311 45.7
FvH4_2g00770 Fragaria vesca HOM05D003874 ORTHO05D004545 1.1e-60 237.7 311 45.7
Sabra13G0085100 Salix brachista HOM05D003874 ORTHO05D004545 1.1e-60 237.7 327 44.6
CANSAT21G0097 Cannabis sativa HOM05D003874 ORTHO05D004545 1.9e-60 236.9 314 45.2
Haze_13960 Corylus avellana HOM05D003874 ORTHO05D004545 1.9e-60 236.9 367 41.1
TAR628G1590 Trochodendron aralioides HOM05D003874 ORTHO05D004545 3.2e-60 236.1 341 44.0
MD10G1004400 Malus domestica HOM05D003874 ORTHO05D004545 4.2e-60 235.7 339 44.2
FAN27G1922 Fragaria x ananassa HOM05D003874 ORTHO05D004545 1.2e-59 234.2 311 46.0
Potri.013G099200 Populus trichocarpa HOM05D003874 ORTHO05D004545 1.2e-59 234.2 342 43.3
QL09p001799 Quercus lobata HOM05D003874 ORTHO05D004545 2.7e-59 233.0 345 41.4
Gohir.D13G118600 Gossypium hirsutum HOM05D003874 ORTHO05D004545 4.7e-59 232.3 355 41.4
Gorai.013G133000 Gossypium raimondii HOM05D003874 ORTHO05D004545 4.7e-59 232.3 355 41.4
CiPaw.04G009100 Carya illinoinensis HOM05D003874 ORTHO05D004545 1.0e-58 231.1 358 42.5
Duzib177G0949 Durio zibethinus HOM05D003874 ORTHO05D004545 1.2e-57 227.6 355 41.7
MD05G1003400 Malus domestica HOM05D003874 ORTHO05D004545 1.2e-57 227.6 342 43.9
Gohir.A13G115500 Gossypium hirsutum HOM05D003874 ORTHO05D004545 2.6e-57 226.5 355 40.8
Nitab4.5_0000980g0270 Nicotiana tabacum HOM05D003874 ORTHO05D004545 5.7e-57 225.3 286 45.5
Manes.02G201800 Manihot esculenta HOM05D003874 ORTHO05D004545 1.7e-56 223.8 319 43.6
Cpa.g.sc21.87 Carica papaya HOM05D003874 ORTHO05D004545 2.2e-56 223.4 369 39.6
MSTRG.24132 Avicennia marina HOM05D003874 ORTHO05D004545 8.3e-56 221.5 315 45.1
vmacro00941 Vaccinium macrocarpon HOM05D003874 ORTHO05D004545 8.3e-56 221.5 327 42.8
TAR376G0450 Trochodendron aralioides HOM05D003874 ORTHO05D004545 3.1e-55 219.5 348 42.2
Cc10_g08580 Coffea canephora HOM05D003874 ORTHO05D004545 4.1e-55 219.2 328 43.6
Manes.18G116100 Manihot esculenta HOM05D003874 ORTHO05D004545 4.1e-55 219.2 350 38.3
Nn5g27385 Nelumbo nucifera HOM05D003874 ORTHO05D004545 4.1e-55 219.2 354 41.5
CiPaw.03G014100 Carya illinoinensis HOM05D003874 ORTHO05D004545 2.0e-54 216.9 360 40.6
Atru.chr13.2507 Acer truncatum HOM05D003874 ORTHO05D004545 2.7e-54 216.5 302 46.4
Ciclev10020185m.g Citrus clementina HOM05D003874 ORTHO05D004545 2.7e-54 216.5 350 40.3
TWI18G0284 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 5.9e-54 215.3 356 42.4
Atru.chr13.2495 Acer truncatum HOM05D003874 ORTHO05D004545 2.3e-53 213.4 302 46.0
Aqoxy6G00117 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 8.6e-53 211.5 297 44.1
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 2.5e-52 209.9 394 38.6
Migut.C01383 Erythranthe guttata HOM05D003874 ORTHO05D004545 3.3e-52 209.5 318 44.0
SalBow7G3598 Salvia bowleyana HOM05D003874 ORTHO05D004545 1.2e-51 207.6 315 42.5
Nitab4.5_0000283g0160 Nicotiana tabacum HOM05D003874 ORTHO05D004545 1.6e-51 207.2 289 43.6
SGA_v2.0_scaffold24G10651 Striga asiatica HOM05D003874 ORTHO05D004545 1.6e-51 207.2 315 43.5
MSTRG.1601 Avicennia marina HOM05D003874 ORTHO05D004545 2.1e-51 206.8 315 41.9
ClCG08G000760 Citrullus lanatus HOM05D003874 ORTHO05D004545 2.1e-51 206.8 325 39.7
TWI75G0660 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 3.6e-51 206.1 356 40.7
CsaV3_5G039860 Cucumis sativus L. HOM05D003874 ORTHO05D004545 8.0e-51 204.9 327 39.4
Peaxi162Scf00078g00734 Petunia axillaris HOM05D003874 ORTHO05D004545 8.0e-51 204.9 345 40.0
Eucgr.F02945 Eucalyptus grandis HOM05D003874 ORTHO05D004545 1.4e-50 204.1 389 35.2
SGA_v2.0_scaffold118G32614 Striga asiatica HOM05D003874 ORTHO05D004545 4.0e-50 202.6 311 41.5
MELO3C022165.2 Cucumis melo HOM05D003874 ORTHO05D004545 1.2e-49 201.1 327 38.8
Lsat_1_v5_gn_9_75521 Lactuca sativa HOM05D003874 ORTHO05D004545 1.5e-49 200.7 290 44.5
SalBow6G4185 Salvia bowleyana HOM05D003874 ORTHO05D004545 2.9e-48 196.4 288 45.5
PGR042G0135 Punica granatum HOM05D003874 ORTHO05D004545 4.9e-48 195.7 322 39.1
Sed0026799 Sechium edule HOM05D003874 ORTHO05D004545 1.1e-47 194.5 328 40.2
MBI03_g29107_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 2.4e-47 193.4 364 36.3
ClCG05G024400 Citrullus lanatus HOM05D003874 ORTHO05D004545 1.6e-46 190.7 327 39.4
MELO3C012083.2 Cucumis melo HOM05D003874 ORTHO05D004545 2.0e-46 190.3 322 39.4
AT4G13530 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 2.7e-46 189.9 287 41.5
SalBow1G3841 Salvia bowleyana HOM05D003874 ORTHO05D004545 2.7e-46 189.9 286 43.0
ECA232G3741 Erigeron canadensis HOM05D003874 ORTHO05D004545 1.5e-44 184.1 288 40.3
Hma1.2p1_0016F.1_g010740 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.9e-44 183.7 260 44.2
Hma1.2p1_0016F.1_g010745 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.9e-44 183.7 260 44.2
Aa31LG9G4130 Aethionema arabicum HOM05D003874 ORTHO05D004545 1.2e-43 181.0 289 39.1
THA.LOC104808737 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 3.6e-43 179.5 324 36.1
Nitab4.5_0000213g0070 Nicotiana tabacum HOM05D003874 ORTHO05D004545 4.7e-43 179.1 366 36.3
Sabra13G0083800 Salix brachista HOM05D003874 ORTHO05D004545 8.0e-43 178.3 288 40.3
Nitab4.5_0000554g0030 Nicotiana tabacum HOM05D003874 ORTHO05D004545 1.4e-42 177.6 361 35.7
AL7G43110 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 1.8e-42 177.2 281 39.9
PSO170G4959 Papaver somniferum HOM05D003874 ORTHO05D004545 3.1e-42 176.4 332 39.5
PGSC0003DMG400012413 Solanum tuberosum HOM05D003874 ORTHO05D004545 3.1e-42 176.4 292 41.1
CDE02G0043 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 6.8e-42 175.3 332 35.8
Oeu028635.2 Olea europaea HOM05D003874 ORTHO05D004545 1.2e-41 174.5 336 36.6
CARHR219160 Cardamine hirsuta HOM05D003874 ORTHO05D004545 3.4e-41 172.9 283 41.0
Lj7A419T39 Lonicera japonica HOM05D003874 ORTHO05D004545 7.5e-41 171.8 200 49.5
Solyc07g063050.1 Solanum lycopersicum HOM05D003874 ORTHO05D004545 9.8e-41 171.4 294 40.5
THA.LOC104821626 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 9.8e-41 171.4 311 36.3
Thhalv10025948m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 1.7e-40 170.6 285 38.6
Sopen07g031240 Solanum pennellii HOM05D003874 ORTHO05D004545 1.7e-40 170.6 294 40.5
MSTRG.22473 Avicennia marina HOM05D003874 ORTHO05D004545 3.7e-40 169.5 300 39.7
Carub.0007s2901 Capsella rubella HOM05D003874 ORTHO05D004545 6.4e-40 168.7 292 38.0
HanXRQChr15g0484691 Helianthus annuus HOM05D003874 ORTHO05D004545 8.3e-40 168.3 273 42.5
PSO017G0683 Papaver somniferum HOM05D003874 ORTHO05D004545 8.3e-40 168.3 290 41.0
CsaV3_5G032550 Cucumis sativus L. HOM05D003874 ORTHO05D004545 1.1e-39 167.9 328 37.2
Sed0021145 Sechium edule HOM05D003874 ORTHO05D004545 1.9e-39 167.2 386 33.9
CAN.G761.11 Capsicum annuum HOM05D003874 ORTHO05D004545 5.4e-39 165.6 267 40.1
Ah.05g170390 Amaranthus hybridus HOM05D003874 ORTHO05D004545 1.2e-38 164.5 278 41.7
CAN.G761.10 Capsicum annuum HOM05D003874 ORTHO05D004545 1.2e-38 164.5 267 40.1
AUR62038535 Chenopodium quinoa HOM05D003874 ORTHO05D004545 2.0e-38 163.7 278 42.1
BcaC08g44301 Brassica carinata HOM05D003874 ORTHO05D004545 2.7e-38 163.3 287 39.0
DCAR_014068 Daucus carota HOM05D003874 ORTHO05D004545 3.5e-38 162.9 355 36.6
C06p17230 Brassica napus HOM05D003874 ORTHO05D004545 4.6e-38 162.5 287 39.0
BolC6t36923H Brassica oleracea HOM05D003874 ORTHO05D004545 4.6e-38 162.5 287 39.0
THA.LOC104813368 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 4.6e-38 162.5 292 37.7
PGSC0003DMG400008421 Solanum tuberosum HOM05D003874 ORTHO05D004545 1.0e-37 161.4 190 48.4
CDE08G0633 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 3.0e-37 159.8 346 35.8
EL10Ac1g01274 Beta vulgaris HOM05D003874 ORTHO05D004545 3.9e-37 159.5 292 39.4
AUR62013384 Chenopodium quinoa HOM05D003874 ORTHO05D004545 3.3e-36 156.4 278 41.4
Aqoxy5G01942 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 5.6e-36 155.6 311 38.3
GSVIVG01036285001 Vitis vinifera HOM05D003874 ORTHO05D004545 7.3e-36 155.2 130 58.5
THA.LOC104806752 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 4.7e-35 152.5 367 31.6
A05p16560 Brassica napus HOM05D003874 ORTHO05D004545 1.1e-34 151.4 287 37.6
BraA05t20564Z Brassica rapa HOM05D003874 ORTHO05D004545 1.4e-34 151.0 283 38.5
Sp7g11130 Schrenkiella parvula HOM05D003874 ORTHO05D004545 2.3e-34 150.2 291 38.5
A02p26740 Brassica napus HOM05D003874 ORTHO05D004545 2.0e-33 147.1 306 34.3
BraA02t07678Z Brassica rapa HOM05D003874 ORTHO05D004545 2.0e-33 147.1 306 34.3
BcaB05g23922 Brassica carinata HOM05D003874 ORTHO05D004545 3.4e-33 146.4 303 33.3
Hund16917 Selenicereus undatus HOM05D003874 ORTHO05D004545 1.3e-32 144.4 124 56.5
Aa31LG9G11920 Aethionema arabicum HOM05D003874 ORTHO05D004545 1.4e-31 141.0 357 29.7
Thhalv10028826m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 2.4e-31 140.2 308 35.1
CsaV3_2G033240 Cucumis sativus L. HOM05D003874 ORTHO05D004545 1.2e-30 137.9 363 31.7
MBI06_g14322_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 3.5e-30 136.3 237 38.0
unitig_37.g13076 Utricularia gibba HOM05D003874 ORTHO05D004545 3.5e-30 136.3 127 55.1
Carub.0006s2864 Capsella rubella HOM05D003874 ORTHO05D004545 7.8e-30 135.2 301 34.6
AL6G43860 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 1.0e-29 134.8 301 34.9
AT4G10080 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 5.1e-29 132.5 325 32.6
BraA09t38447Z Brassica rapa HOM05D003874 ORTHO05D004545 8.6e-29 131.7 281 33.5
BolC2t10292H Brassica oleracea HOM05D003874 ORTHO05D004545 1.1e-28 131.3 140 49.3
ClCG11G008410 Citrullus lanatus HOM05D003874 ORTHO05D004545 1.9e-28 130.6 164 41.5
BcaC03g16428 Brassica carinata HOM05D003874 ORTHO05D004545 2.5e-28 130.2 150 46.7
C02p42530 Brassica napus HOM05D003874 ORTHO05D004545 2.5e-28 130.2 150 46.7
Sp6g07450 Schrenkiella parvula HOM05D003874 ORTHO05D004545 4.3e-28 129.4 320 33.4
A09p28850 Brassica napus HOM05D003874 ORTHO05D004545 5.6e-28 129.0 281 33.5
Oeu013912.1 Olea europaea HOM05D003874 ORTHO05D004545 7.3e-28 128.6 431 29.2
Oeu046029.1 Olea europaea HOM05D003874 ORTHO05D004545 7.3e-28 128.6 157 46.5
BcaB01g01449 Brassica carinata HOM05D003874 ORTHO05D004545 9.5e-28 128.3 124 48.4
BcaC04g21012 Brassica carinata HOM05D003874 ORTHO05D004545 2.8e-27 126.7 278 35.6
C09p36670 Brassica napus HOM05D003874 ORTHO05D004545 2.8e-27 126.7 278 35.6
BolC9t56498H Brassica oleracea HOM05D003874 ORTHO05D004545 2.8e-27 126.7 278 35.6
CARHR261100 Cardamine hirsuta HOM05D003874 ORTHO05D004545 1.4e-26 124.4 182 42.3
Sc21g0007200 Simmondsia chinensis HOM05D003874 ORTHO05D004545 1.5e-25 120.9 314 32.5
arahy.Tifrunner.gnm1.ann1.GHV9B3 Arachis hypogaea HOM05D003874 ORTHO05D004545 4.4e-25 119.4 109 58.7
arahy.Tifrunner.gnm1.ann1.N113B0 Arachis hypogaea HOM05D003874 ORTHO05D004545 4.4e-25 119.4 109 58.7
HPP92_005639 Vanilla planifolia HOM05D000572 ORTHO05D000840 3.7e-24 116.3 283 31.1
Zm00001eb145550 Zea mays HOM05D003874 ORTHO05D004545 4.9e-24 115.9 280 32.5
Zm00001eb366050 Zea mays HOM05D003874 ORTHO05D004545 1.2e-22 111.3 282 30.9
Lalb_Chr15g0080071 Lupinus albus HOM05D003874 ORTHO05D004545 1.6e-22 110.9 104 53.8
TPR.G25536 Trifolium pratense HOM05D003874 ORTHO05D004545 2.7e-22 110.2 283 31.8
Os02g0558500 Oryza sativa ssp. japonica HOM05D003874 ORTHO05D004545 6.0e-22 109.0 108 44.4
Zm00001eb182290 Zea mays HOM05D003874 ORTHO05D004545 7.8e-22 108.6 171 36.3
CSS0021765 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 2.3e-21 107.1 70 74.3
Medtr3g006350 Medicago truncatula HOM05D003874 ORTHO05D004545 3.0e-21 106.7 197 41.6
BcaB05g25162 Brassica carinata HOM05D003874 ORTHO05D004545 5.1e-21 105.9 281 32.4
Lj3g0022236 Lotus japonicus HOM05D003874 ORTHO05D004545 5.1e-21 105.9 115 47.8
Sopen11g018310 Solanum pennellii HOM05D003874 ORTHO05D004545 1.9e-20 104.0 112 50.9
Ca_27532_v3 Cicer arietinum L. HOM05D003874 ORTHO05D004545 5.6e-20 102.4 139 42.4
Solyc11g040300.2 Solanum lycopersicum HOM05D003874 ORTHO05D004545 9.6e-20 101.7 70 68.6
Psat5g232160 Pisum sativum HOM05D003874 ORTHO05D004545 1.6e-19 100.9 274 32.1
CDE07G0664 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 2.1e-19 100.5 285 29.5
VMungo1080G0642 Vigna mungo HOM05D003874 ORTHO05D004545 2.8e-19 100.1 138 44.9
Glyma.06G323500 Glycine max HOM05D003874 ORTHO05D004545 5.2e-18 95.9 220 34.1
Glyma.04G111000 Glycine max HOM05D003874 ORTHO05D004545 6.8e-18 95.5 114 46.5
Phvul.005G002800 Phaseolus vulgaris HOM05D003874 ORTHO05D004545 1.3e-16 91.3 281 30.2
SEGI_28614 Sequoiadendron giganteum HOM05D003874 ORTHO05D004545 3.8e-16 89.7 260 30.0
MELO3C008094.2 Cucumis melo HOM05D003874 ORTHO05D004545 1.1e-15 88.2 129 39.5
CARHR261120 Cardamine hirsuta HOM05D003874 ORTHO05D004545 6.6e-13 79.0 240 28.8
HPP92_009210 Vanilla planifolia HOM05D003874 ORTHO05D004545 2.5e-12 77.0 284 26.8
Os01g0884700 Oryza sativa ssp. japonica HOM05D003874 ORTHO05D004545 9.0e-10 68.6 252 28.6
Nn4g22326 Nelumbo nucifera HOM05D003874 ORTHO05D004545 2.0e-09 67.4 39 76.9
Mapoly0022s0094 Marchantia polymorpha HOM05D001925 ORTHO05D004257 2.4e-07 60.5 84 35.7
Pp3c15_17300 Physcomitrium patens HOM05D001925 ORTHO05D004257 5.4e-07 59.3 95 32.6
Sabra16G0293600 Salix brachista HOM05D003874 ORTHO05D004545 7.9e-06 55.5 93 38.7


User provided reference genes

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