Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003504 Daucus carota HOM05D003474 ORTHO05D003971 1.5e-83 312.8 156 100.0
DCAR_003503 Daucus carota HOM05D003474 ORTHO05D003971 1.6e-69 266.2 156 83.3
DCAR_003502 Daucus carota HOM05D003474 ORTHO05D003971 5.8e-67 257.7 156 82.1
DCAR_003501 Daucus carota HOM05D003474 ORTHO05D003971 2.9e-58 228.8 155 74.2
QL06p049587 Quercus lobata HOM05D003474 ORTHO05D003971 2.4e-28 129.4 167 40.7
CSS0038157 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 3.1e-28 129.0 167 42.5
QL06p049618 Quercus lobata HOM05D003474 ORTHO05D003971 1.2e-27 127.1 165 41.8
Lj4P889T19 Lonicera japonica HOM05D003474 ORTHO05D003971 2.0e-27 126.3 168 42.3
QL06p049633 Quercus lobata HOM05D003474 ORTHO05D003971 2.6e-27 125.9 165 40.6
Oeu002403.1 Olea europaea HOM05D003474 ORTHO05D003971 7.7e-27 124.4 161 42.2
CSS0044421 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.7e-26 123.2 180 40.0
QL06p049593 Quercus lobata HOM05D003474 ORTHO05D003971 2.2e-26 122.9 167 40.1
COL.COLO4_09957 Corchorus olitorius HOM05D003474 ORTHO05D003971 1.4e-25 120.2 176 41.5
Oeu056606.1 Olea europaea HOM05D003474 ORTHO05D003971 1.9e-25 119.8 162 42.0
TWI74G0170 Tripterygium wilfordii HOM05D003474 ORTHO05D003971 1.9e-25 119.8 172 39.0
Cc07_g15300 Coffea canephora HOM05D003474 ORTHO05D003971 3.2e-25 119.0 159 44.0
Actinidia28867 Actinidia chinensis HOM05D003474 ORTHO05D003971 5.5e-25 118.2 163 45.4
CSS0039995 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 9.4e-25 117.5 179 40.2
Ciclev10027277m.g Citrus clementina HOM05D003474 ORTHO05D003971 2.1e-24 116.3 164 42.1
Dinv13182 Davidia involucrata HOM05D003474 ORTHO05D003971 2.7e-24 115.9 117 49.6
CSS0009549 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 4.7e-24 115.2 178 38.8
Potri.007G092300 Populus trichocarpa HOM05D003474 ORTHO05D003971 6.1e-24 114.8 165 41.2
Thecc.01G102400 Theobroma cacao HOM05D003474 ORTHO05D003971 6.1e-24 114.8 172 41.3
Potri.005G076100 Populus trichocarpa HOM05D003474 ORTHO05D003971 7.9e-24 114.4 167 41.9
CSS0002095 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.8e-23 113.2 178 38.2
Cfa002670 Carpinus fangiana HOM05D003474 ORTHO05D003971 3.9e-23 112.1 170 41.2
Sabra07G0076200 Salix brachista HOM05D003474 ORTHO05D003971 1.5e-22 110.2 167 41.3
Sabra07G0076300 Salix brachista HOM05D003474 ORTHO05D003971 1.5e-22 110.2 167 41.3
Hma1.2p1_0047F.1_g027910 Hydrangea macrophylla HOM05D003474 ORTHO05D003971 2.0e-22 109.8 166 38.6
Prupe.6G186100 Prunus persica HOM05D003474 ORTHO05D003971 2.0e-22 109.8 169 40.2
Sabra07G0075900 Salix brachista HOM05D003474 ORTHO05D003971 2.6e-22 109.4 166 41.6
Sabra07G0076000 Salix brachista HOM05D003474 ORTHO05D003971 2.6e-22 109.4 166 41.6
Sabra07G0076100 Salix brachista HOM05D003474 ORTHO05D003971 5.7e-22 108.2 166 41.0
Lsat_1_v5_gn_5_43140 Lactuca sativa HOM05D003474 ORTHO05D003971 7.4e-22 107.8 166 40.4
Lsat_1_v5_gn_5_43240 Lactuca sativa HOM05D003474 ORTHO05D003971 7.4e-22 107.8 166 40.4
Lsat_1_v5_gn_5_43280 Lactuca sativa HOM05D003474 ORTHO05D003971 7.4e-22 107.8 166 38.6
Lsat_1_v5_gn_5_43320 Lactuca sativa HOM05D003474 ORTHO05D003971 7.4e-22 107.8 166 40.4
RcHm_v2.0_Chr2g0114461 Rosa chinensis HOM05D003474 ORTHO05D003971 7.4e-22 107.8 165 38.8
PGSC0003DMG400001891 Solanum tuberosum HOM05D003474 ORTHO05D003971 7.4e-22 107.8 164 39.0
CSS0003854 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 2.2e-21 106.3 177 37.3
SalBow5G3228 Salvia bowleyana HOM05D003474 ORTHO05D003971 2.2e-21 106.3 157 41.4
CiPaw.04G099000 Carya illinoinensis HOM05D003474 ORTHO05D003971 2.8e-21 105.9 172 42.4
Gohir.A11G201900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 2.8e-21 105.9 167 39.5
SalBow5G0419 Salvia bowleyana HOM05D003474 ORTHO05D003971 3.7e-21 105.5 155 42.6
SalBow5G4466 Salvia bowleyana HOM05D003474 ORTHO05D003971 3.7e-21 105.5 155 42.6
Lsat_1_v5_gn_5_43380 Lactuca sativa HOM05D003474 ORTHO05D003971 4.8e-21 105.1 168 41.7
SalBow5G5729 Salvia bowleyana HOM05D003474 ORTHO05D003971 4.8e-21 105.1 153 41.2
Nitab4.5_0000104g0120 Nicotiana tabacum HOM05D003474 ORTHO05D003971 6.3e-21 104.8 118 47.5
Sed0016843 Sechium edule HOM05D003474 ORTHO05D003971 6.3e-21 104.8 162 37.7
CAN.G441.1 Capsicum annuum HOM05D003474 ORTHO05D003971 1.1e-20 104.0 169 39.6
ECA246G4897 Erigeron canadensis HOM05D003474 ORTHO05D003971 1.1e-20 104.0 165 36.4
Gorai.007G239100 Gossypium raimondii HOM05D003474 ORTHO05D003971 1.1e-20 104.0 161 39.1
FvH4_1g20980 Fragaria vesca HOM05D003474 ORTHO05D003971 3.1e-20 102.4 165 38.8
Nn5g30135 Nelumbo nucifera HOM05D003474 ORTHO05D003971 3.1e-20 102.4 164 39.0
FAN19G2364 Fragaria x ananassa HOM05D003474 ORTHO05D003971 4.1e-20 102.1 165 38.8
Duzib187G1721 Durio zibethinus HOM05D003474 ORTHO05D003971 5.3e-20 101.7 168 38.1
Eucgr.I00429 Eucalyptus grandis HOM05D003474 ORTHO05D003971 5.3e-20 101.7 174 39.7
Eucgr.I00430 Eucalyptus grandis HOM05D003474 ORTHO05D003971 5.3e-20 101.7 174 39.7
FAN26G3130 Fragaria x ananassa HOM05D003474 ORTHO05D003971 5.3e-20 101.7 165 38.8
Cpa.g.sc213.15 Carica papaya HOM05D003474 ORTHO05D003971 1.2e-19 100.5 159 38.4
Rhsim08G0010000 Rhododendron simsii HOM05D003474 ORTHO05D003971 1.5e-19 100.1 166 39.8
RcHm_v2.0_Chr2g0114471 Rosa chinensis HOM05D003474 ORTHO05D003971 1.5e-19 100.1 119 42.9
Nitab4.5_0000104g0070 Nicotiana tabacum HOM05D003474 ORTHO05D003971 3.5e-19 99.0 155 37.4
Lsat_1_v5_gn_5_43760 Lactuca sativa HOM05D003474 ORTHO05D003971 4.5e-19 98.6 179 36.9
CiPaw.03G141500 Carya illinoinensis HOM05D003474 ORTHO05D003971 7.7e-19 97.8 175 35.4
Duzib147G1557 Durio zibethinus HOM05D003474 ORTHO05D003971 1.3e-18 97.1 165 37.6
FAN28G0803 Fragaria x ananassa HOM05D003474 ORTHO05D003971 1.3e-18 97.1 165 37.6
Gohir.D11G221900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 1.3e-18 97.1 167 37.1
AUR62003788 Chenopodium quinoa HOM05D003474 ORTHO05D003971 1.7e-18 96.7 183 33.9
Nn1g05334 Nelumbo nucifera HOM05D003474 ORTHO05D003971 1.7e-18 96.7 164 36.6
Nitab4.5_0016805g0010 Nicotiana tabacum HOM05D003474 ORTHO05D003971 1.7e-18 96.7 146 39.0
SalBow5G3492 Salvia bowleyana HOM05D003474 ORTHO05D003971 2.9e-18 95.9 136 41.2
FAN23G2065 Fragaria x ananassa HOM05D003474 ORTHO05D003971 3.8e-18 95.5 165 37.0
Peaxi162Scf00611g00012 Petunia axillaris HOM05D003474 ORTHO05D003971 3.8e-18 95.5 170 36.5
Haze_24940 Corylus avellana HOM05D003474 ORTHO05D003971 5.0e-18 95.1 147 39.5
SalBow3G2422 Salvia bowleyana HOM05D003474 ORTHO05D003971 5.0e-18 95.1 161 37.3
EL10Ac6g15097 Beta vulgaris HOM05D003474 ORTHO05D003971 6.5e-18 94.7 179 33.5
ClCG01G018800 Citrullus lanatus HOM05D003474 ORTHO05D003971 8.5e-18 94.4 169 36.1
Manes.12G135500 Manihot esculenta HOM05D003474 ORTHO05D003971 1.1e-17 94.0 173 38.2
CsaV3_6G045460 Cucumis sativus L. HOM05D003474 ORTHO05D003971 2.5e-17 92.8 166 35.5
AUR62002014 Chenopodium quinoa HOM05D003474 ORTHO05D003971 3.2e-17 92.4 183 33.3
TAR381G0511 Trochodendron aralioides HOM05D003474 ORTHO05D003971 3.2e-17 92.4 162 37.0
Migut.H02362 Erythranthe guttata HOM05D003474 ORTHO05D003971 1.2e-16 90.5 144 41.0
Sabra05G0062700 Salix brachista HOM05D003474 ORTHO05D003971 1.2e-16 90.5 162 35.2
Atru.chr4.70 Acer truncatum HOM05D003474 ORTHO05D003971 2.1e-16 89.7 199 34.2
A10p27350 Brassica napus HOM05D003474 ORTHO05D003971 2.1e-16 89.7 158 34.8
TAR625G0209 Trochodendron aralioides HOM05D003474 ORTHO05D003971 2.7e-16 89.4 114 40.4
Migut.L00118 Erythranthe guttata HOM05D003474 ORTHO05D003971 4.7e-16 88.6 163 38.7
BraA10t44786Z Brassica rapa HOM05D003474 ORTHO05D003971 6.1e-16 88.2 158 34.2
PGSC0003DMG400021798 Solanum tuberosum HOM05D003474 ORTHO05D003971 1.0e-15 87.4 169 34.9
BcaC04g19322 Brassica carinata HOM05D003474 ORTHO05D003971 1.4e-15 87.0 158 34.2
C09p67210 Brassica napus HOM05D003474 ORTHO05D003971 1.4e-15 87.0 158 34.2
TAR625G1533 Trochodendron aralioides HOM05D003474 ORTHO05D003971 1.8e-15 86.7 160 36.2
BolC9t59492H Brassica oleracea HOM05D003474 ORTHO05D003971 3.9e-15 85.5 158 33.5
Sabra07G0076400 Salix brachista HOM05D003474 ORTHO05D003971 5.2e-15 85.1 130 39.2
THA.LOC104804926 Tarenaya hassleriana HOM05D003474 ORTHO05D003971 6.7e-15 84.7 154 35.1
PSO781G0304 Papaver somniferum HOM05D003474 ORTHO05D003971 8.8e-15 84.3 167 32.3
BcaB08g37131 Brassica carinata HOM05D003474 ORTHO05D003971 2.6e-14 82.8 154 33.1
Aqoxy6G00809 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 3.3e-14 82.4 146 34.2
Ah.02g122460 Amaranthus hybridus HOM05D003474 ORTHO05D003971 4.4e-14 82.0 177 32.2
AL6G20700 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 5.7e-14 81.6 156 30.8
BraA06t26118Z Brassica rapa HOM05D003474 ORTHO05D003971 5.7e-14 81.6 163 33.1
PSO781G0331 Papaver somniferum HOM05D003474 ORTHO05D003971 5.7e-14 81.6 163 35.6
Cfa002671 Carpinus fangiana HOM05D003474 ORTHO05D003971 7.4e-14 81.3 170 34.7
PSO781G0184 Papaver somniferum HOM05D003474 ORTHO05D003971 9.7e-14 80.9 166 33.7
BcaB02g09856 Brassica carinata HOM05D003474 ORTHO05D003971 1.3e-13 80.5 163 32.5
Nitab4.5_0006517g0020 Nicotiana tabacum HOM05D003474 ORTHO05D003971 1.3e-13 80.5 141 36.2
Sp2g28110 Schrenkiella parvula HOM05D003474 ORTHO05D003971 1.7e-13 80.1 166 31.3
CARHR203080 Cardamine hirsuta HOM05D003474 ORTHO05D003971 2.2e-13 79.7 156 31.4
BcaC01g02734 Brassica carinata HOM05D003474 ORTHO05D003971 2.8e-13 79.3 162 32.1
C03p61160 Brassica napus HOM05D003474 ORTHO05D003971 2.8e-13 79.3 162 32.1
BolC3t18376H Brassica oleracea HOM05D003474 ORTHO05D003971 2.8e-13 79.3 162 32.1
Sp6g33190 Schrenkiella parvula HOM05D003474 ORTHO05D003971 2.8e-13 79.3 163 33.7
PGSC0003DMG400001890 Solanum tuberosum HOM05D003474 ORTHO05D003971 2.8e-13 79.3 132 39.4
CARHR293740 Cardamine hirsuta HOM05D003474 ORTHO05D003971 3.7e-13 79.0 160 34.4
PSO541G6092 Papaver somniferum HOM05D003474 ORTHO05D003971 3.7e-13 79.0 166 33.1
Solyc04g055140.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 3.7e-13 79.0 134 36.6
Atru.chr4.72 Acer truncatum HOM05D003474 ORTHO05D003971 4.8e-13 78.6 109 39.4
Atru.chr4.73 Acer truncatum HOM05D003474 ORTHO05D003971 4.8e-13 78.6 109 39.4
Sc16g0005640 Simmondsia chinensis HOM05D003474 ORTHO05D003971 8.2e-13 77.8 162 30.2
Aqoxy6G00810 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 1.1e-12 77.4 112 35.7
AL8G42540 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 1.1e-12 77.4 164 31.1
Sopen04g025010 Solanum pennellii HOM05D003474 ORTHO05D003971 1.1e-12 77.4 133 35.3
MBI02_g08731_MAGBIO Magnolia biondii HOM05D003474 ORTHO05D003971 1.8e-12 76.6 158 31.6
PGR004G1795 Punica granatum HOM05D003474 ORTHO05D003971 1.8e-12 76.6 173 32.9
Aa31LG3G16930 Aethionema arabicum HOM05D003474 ORTHO05D003971 3.1e-12 75.9 159 32.7
Solyc04g055150.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 4.1e-12 75.5 134 37.3
AT5G65030 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 5.3e-12 75.1 166 34.3
PSO781G0183 Papaver somniferum HOM05D003474 ORTHO05D003971 7.0e-12 74.7 166 31.9
SalBow5G1505 Salvia bowleyana HOM05D003474 ORTHO05D003971 7.0e-12 74.7 78 48.7
Carub.0008s2587 Capsella rubella HOM05D003474 ORTHO05D003971 9.1e-12 74.3 158 32.3
Carub.0006s0867 Capsella rubella HOM05D003474 ORTHO05D003971 1.6e-11 73.6 146 31.5
Sopen03g021520 Solanum pennellii HOM05D003474 ORTHO05D003971 1.6e-11 73.6 167 31.7
A06p31850 Brassica napus HOM05D003474 ORTHO05D003971 2.6e-11 72.8 118 36.4
Thhalv10005637m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 2.6e-11 72.8 162 31.5
Solyc03g078620.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 2.6e-11 72.8 172 31.4
Sopen04g025000 Solanum pennellii HOM05D003474 ORTHO05D003971 2.6e-11 72.8 133 36.8
Peaxi162Scf00212g00105 Petunia axillaris HOM05D003474 ORTHO05D003971 4.5e-11 72.0 126 37.3
Solyc04g055130.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 4.5e-11 72.0 133 34.6
AT5G10210 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 7.7e-11 71.2 161 29.8
Thhalv10014734m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 1.3e-10 70.5 157 31.2
Ca_16531_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 6.5e-10 68.2 172 29.7
QL06p049605 Quercus lobata HOM05D003474 ORTHO05D003971 6.5e-10 68.2 76 46.1
PGSC0003DMG400001892 Solanum tuberosum HOM05D003474 ORTHO05D003971 8.5e-10 67.8 120 33.3
Ca_16530_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 1.1e-09 67.4 172 29.7
Ca_16533_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 1.5e-09 67.0 172 29.7
TPR.G17834 Trifolium pratense HOM05D003474 ORTHO05D003971 1.5e-09 67.0 176 30.1
Ca_16532_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 1.9e-09 66.6 172 29.7
TPR.G17847 Trifolium pratense HOM05D003474 ORTHO05D003971 1.9e-09 66.6 172 30.2
TPR.G17845 Trifolium pratense HOM05D003474 ORTHO05D003971 4.2e-09 65.5 172 29.7
VMungo1383G0909 Vigna mungo HOM05D003474 ORTHO05D003971 9.4e-09 64.3 171 31.6
Lj6g0005521 Lotus japonicus HOM05D003474 ORTHO05D003971 2.1e-08 63.2 175 30.3
Phvul.001G251900 Phaseolus vulgaris HOM05D003474 ORTHO05D003971 2.1e-08 63.2 115 35.7
Lj6g0019645 Lotus japonicus HOM05D003474 ORTHO05D003971 2.7e-08 62.8 171 29.2
SEGI_16345 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 2.7e-08 62.8 116 37.1
Lalb_Chr08g0231081 Lupinus albus HOM05D003474 ORTHO05D003971 3.6e-08 62.4 164 31.1
MELO3C007759.2 Cucumis melo HOM05D003474 ORTHO05D003971 6.1e-08 61.6 138 34.1
Psat5g089840 Pisum sativum HOM05D003474 ORTHO05D003971 6.1e-08 61.6 172 29.1
BcaB08g37129 Brassica carinata HOM05D003474 ORTHO05D003971 1.0e-07 60.8 92 38.0
Glyma.11G239900 Glycine max HOM05D003474 ORTHO05D003971 1.4e-07 60.5 104 34.6
Lj6g0012852 Lotus japonicus HOM05D003474 ORTHO05D003971 1.4e-07 60.5 176 29.0
Medtr3g087278 Medicago truncatula HOM05D003474 ORTHO05D003971 1.4e-07 60.5 171 28.7
Nitab4.5_0000897g0040 Nicotiana tabacum HOM05D003474 ORTHO05D003971 1.4e-07 60.5 91 42.9
Psat5g089920 Pisum sativum HOM05D003474 ORTHO05D003971 3.0e-07 59.3 171 29.8
BcaC04g19323 Brassica carinata HOM05D003474 ORTHO05D003971 4.0e-07 58.9 89 38.2
Psat5g089880 Pisum sativum HOM05D003474 ORTHO05D003971 4.0e-07 58.9 169 29.0
Medtr3g087325 Medicago truncatula HOM05D003474 ORTHO05D003971 8.8e-07 57.8 172 29.7
Psat5g089720 Pisum sativum HOM05D003474 ORTHO05D003971 8.8e-07 57.8 169 28.4
Medtr3g087330 Medicago truncatula HOM05D003474 ORTHO05D003971 2.0e-06 56.6 171 26.9
SEGI_20067 Sequoiadendron giganteum HOM05D003474 ORTHO05D003971 2.0e-06 56.6 156 31.4
TPR.G17848 Trifolium pratense HOM05D003474 ORTHO05D003971 2.6e-06 56.2 172 27.9
Medtr3g087275 Medicago truncatula HOM05D003474 ORTHO05D003971 3.3e-06 55.8 171 29.2
Medtr3g087270 Medicago truncatula HOM05D003474 ORTHO05D003971 5.7e-06 55.1 171 26.3
Peaxi162Scf00212g00111 Petunia axillaris HOM05D003474 ORTHO05D003971 7.5e-06 54.7 53 54.7
ATR0753G036 Amborella trichopoda HOM05D003474 ORTHO05D003971 9.7e-06 54.3 155 32.3


User provided reference genes

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