Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 2.0e-165 585.9 336 100.0
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 7.4e-27 125.6 215 40.9
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.5e-19 101.3 263 31.9
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 9.4e-14 82.0 124 40.3
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.6e-13 81.3 128 39.8
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 2.1e-13 80.9 113 38.9
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 4.7e-13 79.7 117 41.9
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 3.0e-12 77.0 113 31.9
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 3.9e-12 76.6 107 34.6
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 6.7e-12 75.9 121 37.2
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 2.6e-11 73.9 107 31.8
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 2.6e-11 73.9 137 37.2
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 9.7e-11 72.0 97 40.2
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 9.7e-11 72.0 118 35.6
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.7e-10 71.2 122 34.4
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 6.3e-10 69.3 129 35.7
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 8.2e-10 68.9 103 38.8
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 1.1e-09 68.6 102 35.3
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 1.4e-09 68.2 114 34.2
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.8e-09 67.8 133 28.6
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 1.8e-09 67.8 105 39.0
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.4e-09 67.4 116 37.1
Lsat_1_v5_gn_1_2800 Lactuca sativa HOM05D037404 ORTHO05D035140 2.4e-09 67.4 121 33.1
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 2.4e-09 67.4 95 37.9
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.1e-09 66.6 139 35.3
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 5.3e-09 66.2 115 34.8
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 5.3e-09 66.2 110 34.5
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 7.0e-09 65.9 125 30.4
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 7.0e-09 65.9 115 33.0
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 9.1e-09 65.5 126 31.7
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.2e-08 65.1 110 31.8
MELO3C011050.2 Cucumis melo HOM05D039494 ORTHO05D002375 1.2e-08 65.1 96 39.6
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.2e-08 65.1 128 36.7
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 2.0e-08 64.3 103 40.8
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.0e-08 64.3 103 40.8
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 2.6e-08 63.9 115 34.8
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 2.6e-08 63.9 126 31.7
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 3.5e-08 63.5 98 34.7
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 3.5e-08 63.5 98 34.7
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.5e-08 63.5 113 31.0
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 3.5e-08 63.5 120 31.7
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 4.5e-08 63.2 113 29.2
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 5.9e-08 62.8 109 32.1
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 5.9e-08 62.8 96 36.5
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 5.9e-08 62.8 108 35.2
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 7.7e-08 62.4 110 31.8
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 7.7e-08 62.4 107 33.6
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 7.7e-08 62.4 103 33.0
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 7.7e-08 62.4 117 30.8
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.0e-07 62.0 120 30.0
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.0e-07 62.0 118 37.3
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.0e-07 62.0 115 33.9
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 1.0e-07 62.0 130 33.8
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 1.3e-07 61.6 108 34.3
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 1.3e-07 61.6 107 29.9
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 2.2e-07 60.8 140 32.9
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.2e-07 60.8 108 31.5
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.2e-07 60.8 108 31.5
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 2.2e-07 60.8 118 31.4
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 2.9e-07 60.5 124 30.6
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 2.9e-07 60.5 115 31.3
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 2.9e-07 60.5 117 42.7
Dinv08871 Davidia involucrata HOM05D007989 ORTHO05D010087 3.8e-07 60.1 90 40.0
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 3.8e-07 60.1 107 31.8
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.8e-07 60.1 108 30.6
QL02p002250 Quercus lobata HOM05D004728 ORTHO05D002375 3.8e-07 60.1 97 40.2
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 3.8e-07 60.1 117 35.0
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 3.8e-07 60.1 125 29.6
Os04g0450600 Oryza sativa ssp. japonica HOM05D021312 ORTHO05D012887 5.0e-07 59.7 115 33.0
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 5.0e-07 59.7 93 36.6
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 6.5e-07 59.3 121 29.8
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 1.5e-06 58.2 114 32.5
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 1.5e-06 58.2 120 30.8
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.9e-06 57.8 110 30.9
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 1.9e-06 57.8 103 31.1
CSS0038738 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 2.5e-06 57.4 57 49.1
CSS0048480 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 2.5e-06 57.4 57 49.1
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.5e-06 57.4 107 33.6
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 2.5e-06 57.4 118 33.1
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 2.5e-06 57.4 92 35.9
Lsat_1_v5_gn_1_2780 Lactuca sativa HOM05D004728 ORTHO05D002375 3.2e-06 57.0 103 30.1
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 3.2e-06 57.0 133 30.1
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 3.2e-06 57.0 117 32.5
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 3.2e-06 57.0 109 35.8
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 5.5e-06 56.2 112 32.1
Hund23288 Selenicereus undatus HOM05D004728 ORTHO05D002375 5.5e-06 56.2 137 29.9
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 5.5e-06 56.2 117 29.1
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 7.2e-06 55.8 131 34.4
ECA247G1018 Erigeron canadensis HOM05D037404 ORTHO05D035140 7.2e-06 55.8 120 30.0
TAR376G0192 Trochodendron aralioides HOM05D004728 ORTHO05D002375 7.2e-06 55.8 65 40.0
Zm00001eb081280 Zea mays HOM05D021312 ORTHO05D012887 7.2e-06 55.8 115 28.7
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 9.4e-06 55.5 119 30.3
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 9.4e-06 55.5 114 39.5
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 9.4e-06 55.5 108 31.5


User provided reference genes

Program Settings