Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003417 Daucus carota HOM05D004935 ORTHO05D005676 2.4e-84 315.5 157 100.0
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 8.9e-15 84.3 108 47.2
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 7.5e-14 81.3 101 45.5
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 1.3e-13 80.5 103 45.6
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 4.9e-13 78.6 105 43.8
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 1.8e-12 76.6 93 49.5
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 2.4e-12 76.3 71 54.9
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 4.1e-12 75.5 110 46.4
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 5.4e-12 75.1 95 46.3
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 5.4e-12 75.1 106 45.3
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 7.0e-12 74.7 105 44.8
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 9.2e-12 74.3 103 36.9
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 1.6e-11 73.6 76 51.3
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 1.6e-11 73.6 96 44.8
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.0e-11 73.2 76 51.3
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.0e-11 73.2 71 53.5
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 2.0e-11 73.2 96 44.8
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 2.7e-11 72.8 86 43.0
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 2.7e-11 72.8 96 44.8
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 2.7e-11 72.8 101 46.5
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 3.5e-11 72.4 94 43.6
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 3.5e-11 72.4 118 36.4
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 4.5e-11 72.0 120 39.2
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 5.9e-11 71.6 71 54.9
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 7.8e-11 71.2 94 45.7
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 1.0e-10 70.9 91 45.1
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.0e-10 70.9 71 52.1
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 1.0e-10 70.9 99 41.4
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 1.0e-10 70.9 101 41.6
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 2.3e-10 69.7 106 40.6
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 2.3e-10 69.7 97 45.4
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 2.3e-10 69.7 117 41.0
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 2.9e-10 69.3 95 41.1
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 2.9e-10 69.3 71 50.7
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 2.9e-10 69.3 84 46.4
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 3.8e-10 68.9 93 47.3
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 3.8e-10 68.9 71 47.9
MSTRG.15645 Avicennia marina HOM05D004935 ORTHO05D005676 3.8e-10 68.9 73 47.9
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 3.8e-10 68.9 101 45.5
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 3.8e-10 68.9 84 44.0
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 5.0e-10 68.6 103 43.7
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 6.6e-10 68.2 72 48.6
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 6.6e-10 68.2 71 50.7
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 8.6e-10 67.8 71 53.5
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 8.6e-10 67.8 71 53.5
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 8.6e-10 67.8 101 43.6
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 1.1e-09 67.4 105 41.0
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 1.5e-09 67.0 97 39.2
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 1.5e-09 67.0 103 41.7
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 1.9e-09 66.6 91 45.1
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 2.5e-09 66.2 71 50.7
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 2.5e-09 66.2 71 46.5
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 3.3e-09 65.9 71 50.7
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 4.3e-09 65.5 103 39.8
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 4.3e-09 65.5 103 39.8
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 4.3e-09 65.5 91 46.2
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 5.6e-09 65.1 90 42.2
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 7.3e-09 64.7 103 38.8
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 7.3e-09 64.7 109 36.7
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 1.2e-08 63.9 97 39.2
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 1.2e-08 63.9 88 43.2
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 1.6e-08 63.5 93 39.8
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 2.1e-08 63.2 75 45.3
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 2.1e-08 63.2 103 38.8
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 2.1e-08 63.2 88 39.8
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 2.8e-08 62.8 101 37.6
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 3.6e-08 62.4 103 38.8
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 3.6e-08 62.4 92 34.8
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 3.6e-08 62.4 114 36.8
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 4.7e-08 62.0 110 37.3
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 4.7e-08 62.0 111 36.0
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 6.1e-08 61.6 102 37.3
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 6.1e-08 61.6 99 39.4
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 6.1e-08 61.6 99 39.4
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 6.1e-08 61.6 74 39.2
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 8.0e-08 61.2 105 36.2
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 8.0e-08 61.2 71 45.1
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 8.0e-08 61.2 99 39.4
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 8.0e-08 61.2 112 34.8
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 8.0e-08 61.2 94 41.5
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 1.0e-07 60.8 107 37.4
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 1.0e-07 60.8 123 35.0
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 1.0e-07 60.8 116 37.1
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 1.0e-07 60.8 116 37.1
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 1.0e-07 60.8 116 37.1
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 1.0e-07 60.8 90 37.8
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 1.0e-07 60.8 72 48.6
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 1.4e-07 60.5 116 37.1
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 1.4e-07 60.5 116 37.1
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 1.8e-07 60.1 96 39.6
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 2.3e-07 59.7 103 35.9
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 2.3e-07 59.7 74 41.9
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 2.3e-07 59.7 110 34.5
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 3.0e-07 59.3 143 30.1
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 3.0e-07 59.3 113 36.3
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 4.0e-07 58.9 71 42.3
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 5.2e-07 58.5 95 42.1
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 6.8e-07 58.2 75 42.7
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 6.8e-07 58.2 95 41.1
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 6.8e-07 58.2 95 41.1
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 6.8e-07 58.2 118 35.6
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 6.8e-07 58.2 102 37.3
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 6.8e-07 58.2 102 37.3
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 8.9e-07 57.8 93 38.7
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 8.9e-07 57.8 59 55.9
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 8.9e-07 57.8 115 33.0
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 1.2e-06 57.4 106 35.8
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 1.5e-06 57.0 103 35.0
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 3.4e-06 55.8 67 40.3
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 3.4e-06 55.8 102 34.3
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 3.4e-06 55.8 47 59.6
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 4.4e-06 55.5 81 40.7
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 4.4e-06 55.5 111 35.1
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 5.8e-06 55.1 122 32.0
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 9.8e-06 54.3 43 62.8


User provided reference genes

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