Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 3.7e-68 261.5 145 100.0
DCAR_011227 Daucus carota HOM05D007431 ORTHO05D008438 4.7e-47 191.4 115 91.3
DCAR_011228 Daucus carota HOM05D007431 ORTHO05D008438 4.7e-47 191.4 115 91.3
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 5.3e-14 81.6 133 42.9
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 2.0e-13 79.7 129 42.6
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 2.2e-12 76.3 69 60.9
Glyma.14G094600 Glycine max HOM05D007431 ORTHO05D008438 3.8e-12 75.5 80 51.2
AUR62034380 Chenopodium quinoa HOM05D007431 ORTHO05D008438 8.5e-12 74.3 148 39.9
AUR62022321 Chenopodium quinoa HOM05D007431 ORTHO05D008438 1.9e-11 73.2 116 41.4
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 3.2e-11 72.4 138 40.6
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 5.5e-11 71.6 92 48.9
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 5.5e-11 71.6 115 41.7
ClCG02G020690 Citrullus lanatus HOM05D021867 ORTHO05D008438 5.5e-11 71.6 70 55.7
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 5.5e-11 71.6 145 37.9
VMungo0647G2370 Vigna mungo HOM05D007431 ORTHO05D008438 5.5e-11 71.6 159 35.8
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 9.4e-11 70.9 152 35.5
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 1.2e-10 70.5 142 38.0
CsaV3_6G021930 Cucumis sativus L. HOM05D021867 ORTHO05D008438 1.2e-10 70.5 117 41.9
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 1.2e-10 70.5 141 37.6
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 1.6e-10 70.1 143 37.1
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 2.1e-10 69.7 116 41.4
PSO384G2622 Papaver somniferum HOM05D007431 ORTHO05D008438 2.7e-10 69.3 101 45.5
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 2.7e-10 69.3 79 45.6
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 3.6e-10 68.9 69 52.2
Actinidia00802 Actinidia chinensis HOM05D007431 ORTHO05D008438 4.6e-10 68.6 68 55.9
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 4.6e-10 68.6 126 38.9
Dinv32831 Davidia involucrata HOM05D001089 ORTHO05D008438 4.6e-10 68.6 131 37.4
PSO339G3784 Papaver somniferum HOM05D007431 ORTHO05D008438 4.6e-10 68.6 139 39.6
Potri.019G095600 Populus trichocarpa HOM05D007431 ORTHO05D008438 4.6e-10 68.6 143 36.4
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 6.1e-10 68.2 138 39.1
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 6.1e-10 68.2 90 42.2
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 6.1e-10 68.2 66 57.6
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 6.1e-10 68.2 121 39.7
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 7.9e-10 67.8 140 36.4
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 7.9e-10 67.8 146 39.0
Phvul.001G035300 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 7.9e-10 67.8 156 34.6
Eucgr.B01149 Eucalyptus grandis HOM05D007431 ORTHO05D008438 1.0e-09 67.4 152 36.8
Psat6g020440 Pisum sativum HOM05D007431 ORTHO05D008438 1.0e-09 67.4 143 33.6
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 1.4e-09 67.0 153 37.3
Ca_13166_v3 Cicer arietinum L. HOM05D007431 ORTHO05D008438 1.8e-09 66.6 146 37.0
MBI11_g07544_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.8e-09 66.6 155 39.4
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 1.8e-09 66.6 140 37.1
Hma1.2p1_0321F.1_g124100 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 2.3e-09 66.2 130 38.5
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 3.0e-09 65.9 69 52.2
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 3.0e-09 65.9 97 42.3
Hma1.2p1_0321F.1_g124110 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 3.0e-09 65.9 86 48.8
Phvul.001G035400 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 3.0e-09 65.9 156 33.3
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 3.9e-09 65.5 143 33.6
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 6.7e-09 64.7 65 55.4
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 6.7e-09 64.7 132 36.4
BraA03t10450Z Brassica rapa HOM05D007431 ORTHO05D008438 8.8e-09 64.3 122 37.7
COL.COLO4_18404 Corchorus olitorius HOM05D007431 ORTHO05D008438 8.8e-09 64.3 86 41.9
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 8.8e-09 64.3 152 34.2
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 8.8e-09 64.3 152 34.2
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 8.8e-09 64.3 150 36.0
Ah.15g096430 Amaranthus hybridus HOM05D007431 ORTHO05D008438 1.5e-08 63.5 147 40.1
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 1.5e-08 63.5 150 33.3
Lj5g0005730 Lotus japonicus HOM05D007431 ORTHO05D008438 2.0e-08 63.2 141 35.5
RhsimUnG0043300 Rhododendron simsii HOM05D002794 ORTHO05D008438 2.0e-08 63.2 100 41.0
Aqoxy4G03128 Aquilegia oxysepala HOM05D007431 ORTHO05D008438 2.5e-08 62.8 70 52.9
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 2.5e-08 62.8 70 50.0
Ciclev10028956m.g Citrus clementina HOM05D007431 ORTHO05D008438 2.5e-08 62.8 93 44.1
MBI15_g23248_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 2.5e-08 62.8 75 54.7
TPR.G26566 Trifolium pratense HOM05D007431 ORTHO05D008438 2.5e-08 62.8 141 30.5
MBI18_g47623_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 4.3e-08 62.0 75 52.0
TWI53G0129 Tripterygium wilfordii HOM05D007431 ORTHO05D008438 4.3e-08 62.0 71 53.5
Nitab4.5_0002380g0010 Nicotiana tabacum HOM05D015294 ORTHO05D018867 5.7e-08 61.6 98 38.8
BolC3t13774H Brassica oleracea HOM05D007431 ORTHO05D008438 7.4e-08 61.2 121 36.4
Cfa011407 Carpinus fangiana HOM05D023024 ORTHO05D008438 7.4e-08 61.2 147 37.4
ECA238G2926 Erigeron canadensis HOM05D007431 ORTHO05D008438 7.4e-08 61.2 134 37.3
THA.LOC104814853 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 7.4e-08 61.2 121 38.8
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 9.7e-08 60.8 144 31.9
BcaB05g22609 Brassica carinata HOM05D007431 ORTHO05D008438 9.7e-08 60.8 118 39.0
A03p11360 Brassica napus HOM05D007431 ORTHO05D008438 9.7e-08 60.8 113 38.9
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 9.7e-08 60.8 66 43.9
MBI15_g23251_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 9.7e-08 60.8 154 37.7
Prupe.6G089500 Prunus persica HOM05D016629 ORTHO05D008438 9.7e-08 60.8 86 44.2
Sabra19G0107900 Salix brachista HOM05D007431 ORTHO05D008438 1.3e-07 60.5 142 32.4
Sp6g21690 Schrenkiella parvula HOM05D007431 ORTHO05D008438 1.3e-07 60.5 135 37.0
Haze_23978 Corylus avellana HOM05D023024 ORTHO05D008438 1.7e-07 60.1 156 36.5
CARHR068680 Cardamine hirsuta HOM05D007431 ORTHO05D008438 2.8e-07 59.3 69 46.4
CiPaw.14G074700 Carya illinoinensis HOM05D023024 ORTHO05D008438 3.7e-07 58.9 69 49.3
A02p06640 Brassica napus HOM05D007431 ORTHO05D008438 4.8e-07 58.5 63 46.0
C02p11930 Brassica napus HOM05D007431 ORTHO05D008438 4.8e-07 58.5 63 46.0
BolC2t07290H Brassica oleracea HOM05D007431 ORTHO05D008438 4.8e-07 58.5 63 46.0
BraA02t05746Z Brassica rapa HOM05D007431 ORTHO05D008438 4.8e-07 58.5 63 46.0
Manes.07G083300 Manihot esculenta HOM05D007431 ORTHO05D008438 4.8e-07 58.5 55 58.2
THA.LOC104799471 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 6.3e-07 58.2 172 32.0
C03p13110 Brassica napus HOM05D007431 ORTHO05D008438 1.4e-06 57.0 122 33.6
Sed0014169 Sechium edule HOM05D007431 ORTHO05D008438 1.4e-06 57.0 60 58.3
MBI15_g23247_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.8e-06 56.6 124 37.1
Nn2g10588 Nelumbo nucifera HOM05D007431 ORTHO05D008438 2.4e-06 56.2 60 50.0
Lsat_1_v5_gn_8_91980 Lactuca sativa HOM05D007431 ORTHO05D008438 3.1e-06 55.8 146 37.0
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 4.1e-06 55.5 169 31.4
QL01p035383 Quercus lobata HOM05D007431 ORTHO05D008438 5.3e-06 55.1 138 34.1
Lj3g0021288 Lotus japonicus HOM05D002777 ORTHO05D001516 6.9e-06 54.7 65 47.7
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 9.1e-06 54.3 145 34.5


User provided reference genes

Program Settings