Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003308 Daucus carota HOM05D006966 ORTHO05D008111 6.3e-135 484.2 256 100.0
DCAR_003309 Daucus carota HOM05D006966 ORTHO05D008111 4.9e-39 165.6 151 61.6
DCAR_022251 Daucus carota HOM05D006966 ORTHO05D008111 3.1e-33 146.4 283 37.1
Cc02_g32560 Coffea canephora HOM05D006966 ORTHO05D008111 2.7e-21 106.7 233 33.5
TAR633G0886 Trochodendron aralioides HOM05D006966 ORTHO05D008111 6.0e-21 105.5 276 31.9
Dinv22908 Davidia involucrata HOM05D006966 ORTHO05D008111 2.3e-20 103.6 197 39.6
Dinv40245 Davidia involucrata HOM05D000556 ORTHO05D008111 2.3e-20 103.6 258 32.9
Hma1.2p1_0666F.1_g199360 Hydrangea macrophylla HOM05D006966 ORTHO05D008111 3.0e-20 103.2 310 31.6
TAR362G0564 Trochodendron aralioides HOM05D006966 ORTHO05D008111 3.3e-19 99.8 193 39.4
Duzib128G0678 Durio zibethinus HOM05D006966 ORTHO05D008111 4.3e-19 99.4 168 41.1
PGSC0003DMG400028568 Solanum tuberosum HOM05D006966 ORTHO05D008111 7.4e-19 98.6 198 33.8
Lj7P485T19 Lonicera japonica HOM05D006966 ORTHO05D008111 2.8e-18 96.7 317 30.0
Psat3g009600 Pisum sativum HOM05D006966 ORTHO05D008111 2.8e-18 96.7 190 36.8
Atru.chr2.499 Acer truncatum HOM05D006966 ORTHO05D008111 3.7e-18 96.3 207 34.8
Lj9P680T20 Lonicera japonica HOM05D006966 ORTHO05D008111 6.3e-18 95.5 284 29.6
ClCG02G016130 Citrullus lanatus HOM05D006966 ORTHO05D008111 8.2e-18 95.1 188 37.2
MELO3C004314.2 Cucumis melo HOM05D006966 ORTHO05D008111 8.2e-18 95.1 188 36.2
Nitab4.5_0002848g0060 Nicotiana tabacum HOM05D006966 ORTHO05D008111 3.1e-17 93.2 215 33.5
Actinidia19807 Actinidia chinensis HOM05D001271 ORTHO05D008111 4.1e-17 92.8 198 37.4
Eucgr.H04442 Eucalyptus grandis HOM05D006966 ORTHO05D008111 9.0e-17 91.7 208 34.1
Gohir.A08G212500 Gossypium hirsutum HOM05D006966 ORTHO05D008111 1.5e-16 90.9 194 35.1
Gorai.004G243700 Gossypium raimondii HOM05D006966 ORTHO05D008111 2.0e-16 90.5 194 35.1
Cpa.g.sc48.3 Carica papaya HOM05D006966 ORTHO05D008111 2.6e-16 90.1 218 35.3
Potri.013G027100 Populus trichocarpa HOM05D006966 ORTHO05D008111 2.6e-16 90.1 213 36.6
Gohir.A11G262300 Gossypium hirsutum HOM05D006966 ORTHO05D008111 3.4e-16 89.7 312 32.4
Gohir.D08G229500 Gossypium hirsutum HOM05D006966 ORTHO05D008111 4.5e-16 89.4 195 33.3
Solyc01g098570.2 Solanum lycopersicum HOM05D006966 ORTHO05D008111 5.9e-16 89.0 226 31.4
CsaV3_2G004840 Cucumis sativus L. HOM05D006966 ORTHO05D008111 7.7e-16 88.6 188 36.2
Gohir.D11G272300 Gossypium hirsutum HOM05D006966 ORTHO05D008111 7.7e-16 88.6 201 35.3
Sabra13G0027800 Salix brachista HOM05D006966 ORTHO05D008111 7.7e-16 88.6 96 51.0
Gorai.007G293600 Gossypium raimondii HOM05D006966 ORTHO05D008111 1.3e-15 87.8 313 31.3
Medtr7g113950 Medicago truncatula HOM05D006966 ORTHO05D008111 1.7e-15 87.4 141 41.1
Nn3g21196 Nelumbo nucifera HOM05D006966 ORTHO05D008111 2.9e-15 86.7 186 36.6
Rhsim05G0145100 Rhododendron simsii HOM05D006966 ORTHO05D008111 2.9e-15 86.7 202 34.2
FAN09G4667 Fragaria x ananassa HOM05D006966 ORTHO05D008111 5.0e-15 85.9 305 29.2
Thecc.05G299500 Theobroma cacao HOM05D006966 ORTHO05D008111 8.5e-15 85.1 163 39.3
FvH4_6g05230 Fragaria vesca HOM05D006966 ORTHO05D008111 1.1e-14 84.7 178 35.4
CSS0008116 Camellia sinensis var. sinensis HOM05D006966 ORTHO05D008111 1.4e-14 84.3 303 28.7
CiPaw.07G014000 Carya illinoinensis HOM05D006966 ORTHO05D008111 1.4e-14 84.3 204 34.8
Duzib177G0559 Durio zibethinus HOM05D006966 ORTHO05D008111 1.4e-14 84.3 238 30.7
TPR.G33165 Trifolium pratense HOM05D006966 ORTHO05D008111 2.5e-14 83.6 95 50.5
Peaxi162Scf00434g00052 Petunia axillaris HOM05D006966 ORTHO05D008111 3.2e-14 83.2 105 49.5
CAN.G1134.3 Capsicum annuum HOM05D006966 ORTHO05D008111 9.4e-14 81.6 115 44.3
Lj1g0017885 Lotus japonicus HOM05D006966 ORTHO05D008111 9.4e-14 81.6 140 41.4
Phvul.006G095100 Phaseolus vulgaris HOM05D006966 ORTHO05D008111 1.6e-13 80.9 159 36.5
Potri.005G037600 Populus trichocarpa HOM05D006966 ORTHO05D008111 1.6e-13 80.9 96 47.9
Ca_09380_v3 Cicer arietinum L. HOM05D006966 ORTHO05D008111 2.1e-13 80.5 121 45.5
FAN05G0025 Fragaria x ananassa HOM05D006966 ORTHO05D008111 2.7e-13 80.1 174 35.1
FAN05G1324 Fragaria x ananassa HOM05D006966 ORTHO05D008111 2.7e-13 80.1 174 35.1
FAN05G1352 Fragaria x ananassa HOM05D006966 ORTHO05D008111 2.7e-13 80.1 174 35.1
Glyma.19G238400 Glycine max HOM05D006966 ORTHO05D008111 2.7e-13 80.1 230 32.6
arahy.Tifrunner.gnm1.ann1.3A5YKQ Arachis hypogaea HOM05D006966 ORTHO05D008111 3.6e-13 79.7 167 37.7
CiPaw.08G167600 Carya illinoinensis HOM05D006966 ORTHO05D008111 3.6e-13 79.7 205 32.7
Sopen00g012390 Solanum pennellii HOM05D006966 ORTHO05D008111 3.6e-13 79.7 103 44.7
COL.COLO4_13529 Corchorus olitorius HOM05D006966 ORTHO05D008111 4.6e-13 79.3 295 29.2
FAN14G0100 Fragaria x ananassa HOM05D006966 ORTHO05D008111 4.6e-13 79.3 172 35.5
FAN14G4059 Fragaria x ananassa HOM05D006966 ORTHO05D008111 4.6e-13 79.3 172 35.5
Cfa006536 Carpinus fangiana HOM05D006966 ORTHO05D008111 6.1e-13 79.0 216 32.9
Ciclev10002008m.g Citrus clementina HOM05D006966 ORTHO05D008111 6.1e-13 79.0 117 44.4
Glyma.03G240900 Glycine max HOM05D006966 ORTHO05D008111 7.9e-13 78.6 233 33.5
QL03p004162 Quercus lobata HOM05D006966 ORTHO05D008111 1.8e-12 77.4 206 34.5
Aa31LG2G11900 Aethionema arabicum HOM05D006966 ORTHO05D008111 2.3e-12 77.0 183 32.8
Sabra05G0038600 Salix brachista HOM05D006966 ORTHO05D008111 3.9e-12 76.3 204 31.4
TWI12G1291 Tripterygium wilfordii HOM05D006966 ORTHO05D008111 5.1e-12 75.9 270 33.0
VMungo0540G1150 Vigna mungo HOM05D006966 ORTHO05D008111 5.1e-12 75.9 94 51.1
Prupe.6G331500 Prunus persica HOM05D006966 ORTHO05D008111 6.7e-12 75.5 117 43.6
RcHm_v2.0_Chr3g0453941 Rosa chinensis HOM05D006966 ORTHO05D008111 6.7e-12 75.5 234 30.3
MD12G1224900 Malus domestica HOM05D006966 ORTHO05D008111 8.8e-12 75.1 120 41.7
AL1G65140 Arabidopsis lyrata HOM05D006966 ORTHO05D008111 1.5e-11 74.3 107 42.1
MD04G1210600 Malus domestica HOM05D006966 ORTHO05D008111 1.5e-11 74.3 120 40.8
Aqoxy2G03182 Aquilegia oxysepala HOM05D006966 ORTHO05D008111 2.5e-11 73.6 298 30.2
Haze_04244 Corylus avellana HOM05D006966 ORTHO05D008111 4.3e-11 72.8 99 47.5
CDE11G0954 Ceratophyllum demersum HOM05D006966 ORTHO05D008111 7.4e-11 72.0 166 34.3
CARHR055880 Cardamine hirsuta HOM05D006966 ORTHO05D008111 9.7e-11 71.6 103 40.8
CSS0005342 Camellia sinensis var. sinensis HOM05D006966 ORTHO05D008111 2.8e-10 70.1 201 30.8
Carub.0002s0866 Capsella rubella HOM05D006966 ORTHO05D008111 6.3e-10 68.9 107 37.4
Thhalv10023602m.g Eutrema salsugineum HOM05D006966 ORTHO05D008111 8.2e-10 68.6 143 35.7
CANSAT54G0218 Cannabis sativa HOM05D006966 ORTHO05D008111 1.1e-09 68.2 116 41.4
PGR031G1796 Punica granatum HOM05D006966 ORTHO05D008111 1.1e-09 68.2 143 35.7
Sed0007833 Sechium edule HOM05D006966 ORTHO05D008111 1.1e-09 68.2 185 31.4
AT1G54740 Arabidopsis thaliana HOM05D006966 ORTHO05D008111 1.4e-09 67.8 100 44.0
Sc16g0008300 Simmondsia chinensis HOM05D006966 ORTHO05D008111 1.8e-09 67.4 103 41.7
SpUn0002_0320 Schrenkiella parvula HOM05D006966 ORTHO05D008111 2.4e-09 67.0 135 37.8
Manes.08G123800 Manihot esculenta HOM05D006966 ORTHO05D008111 4.1e-09 66.2 283 29.3
Aqoxy5G00570 Aquilegia oxysepala HOM05D006966 ORTHO05D008111 5.3e-09 65.9 216 31.5
CDE05G1565 Ceratophyllum demersum HOM05D006966 ORTHO05D008111 6.9e-09 65.5 276 26.8
Lj5g0008249 Lotus japonicus HOM05D006966 ORTHO05D008111 6.9e-09 65.5 100 40.0
FAN02G1750 Fragaria x ananassa HOM05D006966 ORTHO05D008111 1.5e-08 64.3 109 36.7
VMungo0720G1138 Vigna mungo HOM05D006966 ORTHO05D008111 2.0e-08 63.9 128 31.2
MBI19_g33142_MAGBIO Magnolia biondii HOM05D006966 ORTHO05D008111 2.6e-08 63.5 170 32.9
Sc09g0003390 Simmondsia chinensis HOM05D006966 ORTHO05D008111 3.4e-08 63.2 96 41.7
ATR0580G269 Amborella trichopoda HOM05D006966 ORTHO05D008111 4.5e-08 62.8 110 37.3
TPR.G2724 Trifolium pratense HOM05D006966 ORTHO05D008111 4.5e-08 62.8 95 41.1
Peaxi162Scf00071g00710 Petunia axillaris HOM05D006966 ORTHO05D008111 1.3e-07 61.2 102 43.1
Nn4g26120 Nelumbo nucifera HOM05D006966 ORTHO05D008111 1.7e-07 60.8 89 42.7
BcaB04g20143 Brassica carinata HOM05D006966 ORTHO05D008111 2.9e-07 60.1 107 37.4
Psat6g148600 Pisum sativum HOM05D006966 ORTHO05D008111 3.8e-07 59.7 102 36.3
Glyma.10G157600 Glycine max HOM05D006966 ORTHO05D008111 6.5e-07 58.9 46 58.7
THA.LOC104823738 Tarenaya hassleriana HOM05D006966 ORTHO05D008111 3.2e-06 56.6 108 37.0
Ah.06g190190 Amaranthus hybridus HOM05D006966 ORTHO05D008111 5.5e-06 55.8 202 28.2
Glyma.20G231100 Glycine max HOM05D006966 ORTHO05D008111 9.4e-06 55.1 90 36.7


User provided reference genes

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