Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003186 Daucus carota HOM05D004634 ORTHO05D005502 7.1e-63 243.8 128 100.0
DCAR_003183 Daucus carota HOM05D004634 ORTHO05D005502 1.6e-62 242.7 128 99.2
TWI31G0086 Tripterygium wilfordii HOM05D004634 ORTHO05D005502 1.6e-43 179.5 112 81.2
QL11p051507 Quercus lobata HOM05D004634 ORTHO05D005502 2.2e-43 179.1 113 80.5
Glyma.20G106600 Glycine max HOM05D004634 ORTHO05D005502 4.8e-43 177.9 113 81.4
Aqoxy6G02026 Aquilegia oxysepala HOM05D004634 ORTHO05D005502 6.3e-43 177.6 113 77.0
Haze_02111 Corylus avellana HOM05D004634 ORTHO05D005502 6.3e-43 177.6 115 78.3
Actinidia20523 Actinidia chinensis HOM05D004634 ORTHO05D005502 8.2e-43 177.2 113 80.5
COL.COLO4_17371 Corchorus olitorius HOM05D004634 ORTHO05D005502 8.2e-43 177.2 113 78.8
Prupe.8G168200 Prunus persica HOM05D004634 ORTHO05D005502 8.2e-43 177.2 113 77.0
Phvul.007G018100 Phaseolus vulgaris HOM05D004634 ORTHO05D005502 1.1e-42 176.8 113 81.4
Cfa005282 Carpinus fangiana HOM05D004634 ORTHO05D005502 1.4e-42 176.4 113 78.8
Glyma.10G283100 Glycine max HOM05D004634 ORTHO05D005502 1.4e-42 176.4 113 80.5
VMungo0720G0537 Vigna mungo HOM05D004634 ORTHO05D005502 1.4e-42 176.4 113 80.5
Dinv14123 Davidia involucrata HOM05D004634 ORTHO05D005502 1.8e-42 176.0 113 77.9
Migut.B00062 Erythranthe guttata HOM05D004634 ORTHO05D005502 1.8e-42 176.0 113 77.9
FAN27G3200 Fragaria x ananassa HOM05D004634 ORTHO05D005502 1.8e-42 176.0 113 78.8
FvH4_2g15590 Fragaria vesca HOM05D004634 ORTHO05D005502 2.4e-42 175.6 113 78.8
FAN24G0083 Fragaria x ananassa HOM05D004634 ORTHO05D005502 2.4e-42 175.6 113 78.8
MD05G1124500 Malus domestica HOM05D004634 ORTHO05D005502 2.4e-42 175.6 113 76.1
GSVIVG01023991001 Vitis vinifera HOM05D004634 ORTHO05D005502 2.4e-42 175.6 113 77.9
FAN20G2203 Fragaria x ananassa HOM05D004634 ORTHO05D005502 3.1e-42 175.3 113 78.8
Ciclev10028955m.g Citrus clementina HOM05D004634 ORTHO05D005502 5.3e-42 174.5 113 78.8
Dinv41921 Davidia involucrata HOM05D004634 ORTHO05D005502 5.3e-42 174.5 113 76.1
TWI79G0300 Tripterygium wilfordii HOM05D004634 ORTHO05D005502 5.3e-42 174.5 112 77.7
Actinidia21473 Actinidia chinensis HOM05D004634 ORTHO05D005502 6.9e-42 174.1 113 77.0
FAN15G1522 Fragaria x ananassa HOM05D004634 ORTHO05D005502 6.9e-42 174.1 113 77.9
PGR042G2401 Punica granatum HOM05D004634 ORTHO05D005502 6.9e-42 174.1 113 78.8
MSTRG.19978 Avicennia marina HOM05D004634 ORTHO05D005502 9.0e-42 173.7 113 74.3
Ca_03299_v3 Cicer arietinum L. HOM05D004634 ORTHO05D005502 9.0e-42 173.7 113 79.6
RcHm_v2.0_Chr6g0278771 Rosa chinensis HOM05D004634 ORTHO05D005502 9.0e-42 173.7 113 77.0
TPR.G2419 Trifolium pratense HOM05D004634 ORTHO05D005502 9.0e-42 173.7 113 79.6
ClCG02G012070 Citrullus lanatus HOM05D004634 ORTHO05D005502 1.2e-41 173.3 113 77.0
Gohir.A01G170200 Gossypium hirsutum HOM05D004634 ORTHO05D005502 1.2e-41 173.3 112 78.6
Gohir.A12G036500 Gossypium hirsutum HOM05D004634 ORTHO05D005502 1.2e-41 173.3 113 78.8
Gohir.D12G036100 Gossypium hirsutum HOM05D004634 ORTHO05D005502 1.2e-41 173.3 113 78.8
Gorai.008G037300 Gossypium raimondii HOM05D004634 ORTHO05D005502 1.2e-41 173.3 113 78.8
Manes.04G071300 Manihot esculenta HOM05D004634 ORTHO05D005502 1.2e-41 173.3 113 74.3
Thecc.02G056100 Theobroma cacao HOM05D004634 ORTHO05D005502 1.2e-41 173.3 120 74.2
Hma1.2p1_0163F.1_g072640 Hydrangea macrophylla HOM05D004634 ORTHO05D005502 2.6e-41 172.2 113 75.2
MD10G1127300 Malus domestica HOM05D004634 ORTHO05D005502 4.5e-41 171.4 113 73.5
Potri.004G177300 Populus trichocarpa HOM05D004634 ORTHO05D005502 4.5e-41 171.4 113 76.1
Sabra04G0119200 Salix brachista HOM05D004634 ORTHO05D005502 4.5e-41 171.4 113 76.1
CSS0049403 Camellia sinensis var. sinensis HOM05D004634 ORTHO05D005502 7.7e-41 170.6 113 77.9
Eucgr.G01787 Eucalyptus grandis HOM05D004634 ORTHO05D005502 7.7e-41 170.6 113 75.2
Manes.11G097500 Manihot esculenta HOM05D004634 ORTHO05D005502 7.7e-41 170.6 113 74.3
CANSAT25G1088 Cannabis sativa HOM05D004634 ORTHO05D005502 1.0e-40 170.2 113 77.0
Duzib052G0999 Durio zibethinus HOM05D004634 ORTHO05D005502 1.0e-40 170.2 113 77.0
Gohir.D01G161300 Gossypium hirsutum HOM05D004634 ORTHO05D005502 1.0e-40 170.2 112 77.7
Gorai.002G199900 Gossypium raimondii HOM05D004634 ORTHO05D005502 1.0e-40 170.2 112 77.7
Sed0005362 Sechium edule HOM05D004634 ORTHO05D005502 1.0e-40 170.2 113 76.1
MBI05_g00175_MAGBIO Magnolia biondii HOM05D004634 ORTHO05D005502 1.3e-40 169.9 113 72.6
Duzib132G0372 Durio zibethinus HOM05D004634 ORTHO05D005502 1.7e-40 169.5 113 77.0
TAR381G1727 Trochodendron aralioides HOM05D004634 ORTHO05D005502 1.7e-40 169.5 115 73.0
unitig_744.g24280 Utricularia gibba HOM05D004634 ORTHO05D005502 2.2e-40 169.1 113 75.2
arahy.Tifrunner.gnm1.ann1.1RV92X Arachis hypogaea HOM05D004634 ORTHO05D005502 2.9e-40 168.7 125 73.6
arahy.Tifrunner.gnm1.ann1.X9NSEY Arachis hypogaea HOM05D004634 ORTHO05D005502 2.9e-40 168.7 125 73.6
Cc09_g10260 Coffea canephora HOM05D004634 ORTHO05D005502 2.9e-40 168.7 113 79.6
Hma1.2p1_0032F.1_g019265 Hydrangea macrophylla HOM05D004634 ORTHO05D005502 2.9e-40 168.7 124 71.8
Nitab4.5_0003698g0030 Nicotiana tabacum HOM05D004634 ORTHO05D005502 3.8e-40 168.3 113 75.2
TAR381G0316 Trochodendron aralioides HOM05D004634 ORTHO05D005502 3.8e-40 168.3 113 73.5
MELO3C020831.2 Cucumis melo HOM05D004634 ORTHO05D005502 5.0e-40 167.9 112 75.0
Cpa.g.sc20.107 Carica papaya HOM05D004634 ORTHO05D005502 6.5e-40 167.5 112 76.8
SGA_v2.0_scaffold58G20350 Striga asiatica HOM05D004634 ORTHO05D005502 6.5e-40 167.5 113 73.5
Ah.01g023190 Amaranthus hybridus HOM05D004634 ORTHO05D005502 8.5e-40 167.2 113 75.2
Carub.0004s0001 Capsella rubella HOM05D004634 ORTHO05D005502 1.1e-39 166.8 114 73.7
Atru.chr5.3387 Acer truncatum HOM05D004634 ORTHO05D005502 1.4e-39 166.4 113 72.6
Duzib248G1349 Durio zibethinus HOM05D004634 ORTHO05D005502 1.4e-39 166.4 111 78.4
Rhsim11G0193300 Rhododendron simsii HOM05D004634 ORTHO05D005502 1.4e-39 166.4 113 77.0
CiPaw.06G120500 Carya illinoinensis HOM05D004634 ORTHO05D005502 1.9e-39 166.0 113 73.5
Sed0028226 Sechium edule HOM05D004634 ORTHO05D005502 1.9e-39 166.0 113 74.3
THA.LOC104804086 Tarenaya hassleriana HOM05D004634 ORTHO05D005502 1.9e-39 166.0 113 74.3
THA.LOC104824757 Tarenaya hassleriana HOM05D004634 ORTHO05D005502 1.9e-39 166.0 114 72.8
Lj9A400T59 Lonicera japonica HOM05D004634 ORTHO05D005502 2.5e-39 165.6 113 72.6
Peaxi162Scf00362g00529 Petunia axillaris HOM05D004634 ORTHO05D005502 2.5e-39 165.6 113 75.2
Medtr1g112860 Medicago truncatula HOM05D004634 ORTHO05D005502 3.2e-39 165.2 113 76.1
CAN.G588.96 Capsicum annuum HOM05D004634 ORTHO05D005502 5.5e-39 164.5 113 74.3
HanXRQChr17g0544171 Helianthus annuus HOM05D004634 ORTHO05D005502 5.5e-39 164.5 112 75.9
Psat6g232600 Pisum sativum HOM05D004634 ORTHO05D005502 5.5e-39 164.5 113 75.2
AL4G10040 Arabidopsis lyrata HOM05D004634 ORTHO05D005502 7.2e-39 164.1 114 71.1
CiPaw.05G084700 Carya illinoinensis HOM05D004634 ORTHO05D005502 7.2e-39 164.1 113 75.2
ECA246G0918 Erigeron canadensis HOM05D004634 ORTHO05D005502 7.2e-39 164.1 112 76.8
Lsat_1_v5_gn_3_47561 Lactuca sativa HOM05D004634 ORTHO05D005502 7.2e-39 164.1 112 76.8
Potri.009G137600 Populus trichocarpa HOM05D004634 ORTHO05D005502 7.2e-39 164.1 113 74.3
Actinidia32031 Actinidia chinensis HOM05D004634 ORTHO05D005502 9.4e-39 163.7 113 72.6
AT2G20920 Arabidopsis thaliana HOM05D004634 ORTHO05D005502 9.4e-39 163.7 114 71.9
CSS0014782 Camellia sinensis var. sinensis HOM05D004634 ORTHO05D005502 9.4e-39 163.7 113 73.5
CARHR111820 Cardamine hirsuta HOM05D004634 ORTHO05D005502 9.4e-39 163.7 114 71.9
Lj5g0018549 Lotus japonicus HOM05D004634 ORTHO05D005502 1.2e-38 163.3 113 76.1
Rhsim05G0053200 Rhododendron simsii HOM05D004634 ORTHO05D005502 1.2e-38 163.3 113 72.6
AUR62010016 Chenopodium quinoa HOM05D004634 ORTHO05D005502 2.1e-38 162.5 113 73.5
Hund06448 Selenicereus undatus HOM05D004634 ORTHO05D005502 2.1e-38 162.5 113 71.7
Sopen01g053790 Solanum pennellii HOM05D004634 ORTHO05D005502 2.1e-38 162.5 113 72.6
Lalb_Chr21g0307021 Lupinus albus HOM05D004634 ORTHO05D005502 2.7e-38 162.2 114 74.6
Solyc01g111750.4 Solanum lycopersicum HOM05D004634 ORTHO05D005502 2.7e-38 162.2 112 73.2
EL10Ac9g21345 Beta vulgaris HOM05D004634 ORTHO05D005502 3.6e-38 161.8 113 71.7
AUR62013006 Chenopodium quinoa HOM05D004634 ORTHO05D005502 3.6e-38 161.8 113 74.3
PGSC0003DMG400018041 Solanum tuberosum HOM05D004634 ORTHO05D005502 3.6e-38 161.8 112 73.2
ClCG02G003930 Citrullus lanatus HOM05D004634 ORTHO05D005502 6.1e-38 161.0 112 74.1
Nn5g30833 Nelumbo nucifera HOM05D004634 ORTHO05D005502 1.0e-37 160.2 113 73.5
vmacro17321 Vaccinium macrocarpon HOM05D004634 ORTHO05D005502 1.0e-37 160.2 113 70.8
Sabra09G0106800 Salix brachista HOM05D004634 ORTHO05D005502 1.8e-37 159.5 113 72.6
Sp4g00110 Schrenkiella parvula HOM05D004634 ORTHO05D005502 2.3e-37 159.1 114 70.2
Thhalv10000275m.g Eutrema salsugineum HOM05D004634 ORTHO05D005502 3.9e-37 158.3 114 69.3
Ah.01g008170 Amaranthus hybridus HOM05D004634 ORTHO05D005502 6.7e-37 157.5 113 69.0
BcaB01g02957 Brassica carinata HOM05D004634 ORTHO05D005502 8.8e-37 157.1 113 69.9
Aa31LG6G16660 Aethionema arabicum HOM05D004634 ORTHO05D005502 1.1e-36 156.8 113 70.8
vmacro02287 Vaccinium macrocarpon HOM05D004634 ORTHO05D005502 5.7e-36 154.5 113 69.9
Aa31LG7G15710 Aethionema arabicum HOM05D004634 ORTHO05D005502 9.7e-36 153.7 114 65.8
Os03g0137300 Oryza sativa ssp. japonica HOM05D004634 ORTHO05D005502 9.7e-36 153.7 113 66.4
BcaC01g04857 Brassica carinata HOM05D004634 ORTHO05D005502 1.3e-35 153.3 113 68.1
C03p33070 Brassica napus HOM05D004634 ORTHO05D005502 1.3e-35 153.3 113 68.1
BolC3t15633H Brassica oleracea HOM05D004634 ORTHO05D005502 1.3e-35 153.3 113 68.1
MELO3C013335.2 Cucumis melo HOM05D004634 ORTHO05D005502 1.3e-35 153.3 112 70.5
PSO210G1566 Papaver somniferum HOM05D004634 ORTHO05D005502 2.2e-35 152.5 113 67.3
HPP92_001746 Vanilla planifolia HOM05D004634 ORTHO05D005502 2.2e-35 152.5 113 63.7
A03p27430 Brassica napus HOM05D004634 ORTHO05D005502 2.8e-35 152.1 113 67.3
BraA03t11955Z Brassica rapa HOM05D004634 ORTHO05D005502 2.8e-35 152.1 113 67.3
PSO170G0173 Papaver somniferum HOM05D004634 ORTHO05D005502 1.1e-34 150.2 111 67.6
Zm00001eb003030 Zea mays HOM05D004634 ORTHO05D005502 1.1e-34 150.2 113 65.5
Zm00001eb402730 Zea mays HOM05D004634 ORTHO05D005502 2.4e-34 149.1 113 63.7
CDE05G0405 Ceratophyllum demersum HOM05D004634 ORTHO05D005502 3.1e-34 148.7 111 65.8
CDE05G2434 Ceratophyllum demersum HOM05D004634 ORTHO05D005502 9.1e-34 147.1 111 64.9
ECA246G0196 Erigeron canadensis HOM05D004634 ORTHO05D005502 1.5e-33 146.4 111 71.2
PSO675G7052 Papaver somniferum HOM05D004634 ORTHO05D005502 1.0e-32 143.7 113 62.8
Migut.N01330 Erythranthe guttata HOM05D004634 ORTHO05D005502 1.3e-32 143.3 108 68.5
Oeu015555.1 Olea europaea HOM05D004634 ORTHO05D005502 2.2e-32 142.5 128 60.2
CsaV3_2G016230 Cucumis sativus L. HOM05D004634 ORTHO05D005502 5.0e-32 141.4 97 73.2
ATR0661G512 Amborella trichopoda HOM05D004634 ORTHO05D005502 1.4e-29 133.3 105 65.7
Mapoly0158s0035 Marchantia polymorpha HOM05D004634 ORTHO05D005502 8.8e-29 130.6 114 58.8
PSO541G4751 Papaver somniferum HOM05D004634 ORTHO05D005502 8.8e-29 130.6 113 58.4
Nn6g31925 Nelumbo nucifera HOM05D004634 ORTHO05D005502 2.4e-26 122.5 98 64.3
AagrBONN_evm.TU.Sc2ySwM_344.2768 Anthoceros agrestis HOM05D004634 ORTHO05D005502 1.5e-25 119.8 112 58.0
Pp3c10_20920 Physcomitrium patens HOM05D004634 ORTHO05D005502 1.0e-24 117.1 114 50.9
Lj9A397T37 Lonicera japonica HOM05D004634 ORTHO05D005502 1.7e-24 116.3 91 65.9
Pp3c20_20480 Physcomitrium patens HOM05D004634 ORTHO05D005502 1.5e-23 113.2 113 49.6
TAR376G0880 Trochodendron aralioides HOM05D004634 ORTHO05D005502 5.5e-23 111.3 86 68.6
SMO356G0675 Selaginella moellendorffii HOM05D004634 ORTHO05D005502 2.0e-20 102.8 114 49.1
Lj5A177T58 Lonicera japonica HOM05D004634 ORTHO05D005502 3.3e-20 102.1 101 57.4
CBR_g40579 Chara braunii HOM05D004634 ORTHO05D000002 1.1e-18 97.1 117 41.0
Sc18g0006360 Simmondsia chinensis HOM05D004634 ORTHO05D005502 1.1e-18 97.1 72 65.3
Atru.chr5.3399 Acer truncatum HOM05D004634 ORTHO05D005502 1.8e-18 96.3 72 65.3
Actinidia18044 Actinidia chinensis HOM05D004634 ORTHO05D005502 2.2e-16 89.4 67 70.1
Oeu029649.1 Olea europaea HOM05D004634 ORTHO05D005502 2.9e-16 89.0 76 61.8
CsaV3_7G001190 Cucumis sativus L. HOM05D004634 ORTHO05D005502 1.0e-13 80.5 50 78.0
Sed0025180 Sechium edule HOM05D004634 ORTHO05D005502 6.8e-13 77.8 70 62.9
MCO05G599 Micromonas commoda HOM05D004634 ORTHO05D005502 1.2e-06 57.0 109 36.7
BcaC07g41182 Brassica carinata HOM05D004634 ORTHO05D005502 1.6e-06 56.6 60 51.7


User provided reference genes

Program Settings