Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 5.6e-63 244.2 131 100.0
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 4.3e-39 164.9 129 69.8
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.4e-37 159.8 133 63.9
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.8e-37 159.5 140 64.3
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.8e-37 159.5 140 64.3
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 4.0e-37 158.3 141 63.8
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 4.0e-37 158.3 133 64.7
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 5.3e-37 157.9 135 65.2
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 5.3e-37 157.9 133 65.4
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 6.9e-37 157.5 133 65.4
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 6.9e-37 157.5 133 65.4
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 6.9e-37 157.5 133 65.4
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 6.9e-37 157.5 124 67.7
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 9.0e-37 157.1 143 61.5
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 9.0e-37 157.1 144 63.2
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 1.2e-36 156.8 148 60.1
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.2e-36 156.8 147 61.9
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 1.5e-36 156.4 138 64.5
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.0e-36 156.0 128 64.8
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 2.0e-36 156.0 141 63.1
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 2.0e-36 156.0 144 62.5
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 2.6e-36 155.6 150 59.3
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 3.4e-36 155.2 145 58.6
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 4.4e-36 154.8 131 64.1
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 4.4e-36 154.8 148 59.5
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 5.8e-36 154.5 141 63.1
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 7.6e-36 154.1 136 64.0
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 7.6e-36 154.1 131 61.8
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 7.6e-36 154.1 146 58.9
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 7.6e-36 154.1 131 60.3
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 9.9e-36 153.7 129 65.9
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 9.9e-36 153.7 127 64.6
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 9.9e-36 153.7 131 61.1
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 1.3e-35 153.3 141 60.3
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 1.3e-35 153.3 147 59.2
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.7e-35 152.9 143 60.8
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 2.2e-35 152.5 141 60.3
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.2e-35 152.5 132 62.1
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 2.9e-35 152.1 132 61.4
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 2.9e-35 152.1 143 58.0
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 2.9e-35 152.1 134 63.4
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 3.8e-35 151.8 150 57.3
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 3.8e-35 151.8 141 60.3
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 3.8e-35 151.8 127 62.2
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 4.9e-35 151.4 141 61.0
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 8.4e-35 150.6 142 59.9
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 1.1e-34 150.2 133 63.2
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.4e-34 149.8 148 59.5
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 1.9e-34 149.4 131 60.3
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 2.4e-34 149.1 151 57.0
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 4.2e-34 148.3 133 60.9
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 4.2e-34 148.3 144 58.3
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 4.2e-34 148.3 152 53.9
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 5.4e-34 147.9 135 60.0
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 7.1e-34 147.5 133 59.4
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 7.1e-34 147.5 129 60.5
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 9.3e-34 147.1 136 59.6
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 9.3e-34 147.1 136 59.6
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 9.3e-34 147.1 139 60.4
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 9.3e-34 147.1 131 58.8
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 1.2e-33 146.7 151 57.6
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 1.2e-33 146.7 161 54.0
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 1.2e-33 146.7 141 59.6
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.2e-33 146.7 129 63.6
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 1.2e-33 146.7 144 59.7
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 2.1e-33 146.0 159 54.7
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 2.7e-33 145.6 131 59.5
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 3.5e-33 145.2 150 57.3
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 3.5e-33 145.2 142 57.0
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 4.6e-33 144.8 142 56.3
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 4.6e-33 144.8 142 56.3
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 4.6e-33 144.8 136 61.8
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 6.0e-33 144.4 118 66.1
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 6.0e-33 144.4 140 59.3
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 7.9e-33 144.1 148 56.8
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 1.3e-32 143.3 145 55.2
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 1.7e-32 142.9 138 57.2
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 1.7e-32 142.9 133 57.9
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 1.7e-32 142.9 149 59.1
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 1.7e-32 142.9 130 59.2
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 3.0e-32 142.1 117 65.8
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 3.0e-32 142.1 137 59.9
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 3.9e-32 141.7 124 62.1
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 6.6e-32 141.0 137 56.2
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 6.6e-32 141.0 131 59.5
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 8.7e-32 140.6 132 62.1
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 1.1e-31 140.2 137 56.2
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 1.1e-31 140.2 148 57.4
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 1.5e-31 139.8 130 56.2
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 3.3e-31 138.7 117 64.1
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 3.3e-31 138.7 141 60.3
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 1.3e-30 136.7 129 58.1
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 2.1e-30 136.0 129 58.1
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 2.8e-30 135.6 133 62.4
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 4.8e-30 134.8 140 53.6
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 6.2e-30 134.4 140 54.3
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 8.1e-30 134.0 129 55.0
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 1.8e-29 132.9 129 56.6
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 1.8e-29 132.9 144 55.6
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 2.4e-29 132.5 127 55.9
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 5.3e-29 131.3 132 56.8
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 4.5e-28 128.3 129 57.4
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 5.8e-28 127.9 138 50.0
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 7.6e-28 127.5 123 54.5
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 7.6e-28 127.5 123 54.5
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 7.6e-28 127.5 123 54.5
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 7.6e-28 127.5 123 54.5
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 1.7e-27 126.3 128 56.2
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 2.2e-27 125.9 123 54.5
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 2.9e-27 125.6 135 53.3
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 8.4e-27 124.0 143 51.7
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 5.1e-24 114.8 120 55.8
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 8.7e-24 114.0 132 51.5
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 4.8e-22 108.2 126 49.2
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.8e-21 106.3 144 49.3
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 4.0e-21 105.1 128 51.6
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 6.9e-21 104.4 126 46.8
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.2e-20 103.6 105 55.2
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 5.5e-18 94.7 109 53.2
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 3.5e-17 92.0 130 48.5
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 6.0e-17 91.3 123 47.2
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 7.9e-17 90.9 142 43.0
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 3.4e-12 75.5 60 61.7
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 2.9e-11 72.4 126 35.7
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 2.5e-10 69.3 48 68.8
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 3.5e-09 65.5 62 56.5
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 1.3e-08 63.5 65 52.3
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.8e-08 63.2 46 58.7
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 2.3e-08 62.8 44 68.2
Cre01.g031250 Chlamydomonas reinhardtii HOM05D006047 ORTHO05D007353 9.7e-07 57.4 115 32.2
Zm00001eb181930 Zea mays HOM05D001107 ORTHO05D007353 2.8e-06 55.8 44 65.9
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 4.8e-06 55.1 116 31.0
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 4.8e-06 55.1 61 49.2


User provided reference genes

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