Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2533.1 1268 100.0
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2199.5 1269 85.6
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2197.5 1269 85.5
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2197.2 1269 85.8
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2195.6 1269 85.5
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2189.5 1268 85.2
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2187.5 1269 85.7
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2179.8 1267 85.1
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2176.4 1267 84.8
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2173.3 1268 85.0
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2171.0 1262 85.2
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2169.8 1263 85.0
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2168.7 1267 84.5
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2165.2 1269 84.5
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2164.4 1267 84.5
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2163.3 1269 84.6
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2161.7 1268 83.1
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2161.3 1267 84.5
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2159.4 1267 84.1
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2159.0 1268 84.2
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1268 84.1
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2157.9 1268 84.3
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2156.7 1267 83.6
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2156.3 1267 84.7
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2153.6 1267 84.6
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2152.9 1267 84.3
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2150.6 1267 83.5
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2150.6 1269 84.2
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2150.2 1269 83.8
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2146.7 1267 83.6
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2145.5 1262 84.6
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2145.5 1267 83.2
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2144.0 1267 83.3
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2144.0 1263 83.6
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2141.7 1266 83.6
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2141.7 1269 82.4
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2139.8 1269 82.3
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2139.0 1239 85.3
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2137.8 1267 83.4
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2137.1 1269 83.2
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2136.7 1267 83.2
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2136.7 1267 83.2
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2135.9 1267 83.1
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2135.5 1269 82.0
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2134.0 1272 82.3
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2133.6 1267 82.5
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2132.1 1267 82.8
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2131.3 1267 82.6
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2130.5 1267 83.0
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2130.1 1266 82.3
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2129.0 1267 82.8
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2128.6 1268 83.3
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2125.9 1266 82.4
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2124.7 1267 82.6
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2124.4 1267 83.0
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2123.2 1267 82.2
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2122.4 1268 83.0
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2122.4 1269 83.1
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2122.1 1268 82.3
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2122.1 1267 82.1
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2122.1 1267 82.6
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2122.1 1268 82.1
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2120.1 1267 82.6
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2119.4 1267 82.1
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2119.0 1267 82.1
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2118.6 1267 81.9
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2117.0 1267 82.3
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2116.3 1267 83.4
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2115.9 1268 81.9
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2115.9 1273 82.4
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2115.1 1267 82.2
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2109.3 1266 81.5
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2108.2 1266 82.4
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2106.6 1262 82.7
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2105.5 1266 82.4
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2104.3 1268 81.3
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2103.2 1268 81.9
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2101.2 1208 86.3
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2101.2 1269 82.3
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2097.8 1267 81.9
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2088.2 1267 81.3
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2084.3 1249 82.7
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2080.4 1266 81.2
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2067.0 1267 80.7
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2060.8 1273 81.0
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2056.2 1270 79.5
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2046.9 1266 79.9
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2046.2 1267 79.6
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2038.5 1267 80.5
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2038.5 1263 80.4
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2020.7 1270 77.2
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2002.3 1269 78.5
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1983.4 1266 78.1
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1946.4 1266 76.2
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1931.8 1161 82.9
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1914.8 1277 73.5
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1884.0 1271 74.2
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1867.4 1271 72.6
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1842.8 1191 77.4
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1824.7 1249 73.1
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1818.5 1274 71.4
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1815.8 1069 83.2
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1801.9 1088 81.6
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1771.5 1268 71.8
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1770.4 1268 71.1
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1759.2 1129 78.7
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1626.3 962 82.3
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1548.9 1051 73.0
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1525.4 1324 61.1
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1397.9 813 84.4
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1349.3 1267 59.3
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1327.0 1337 54.5
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1289.2 1389 52.5
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1247.3 725 84.7
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1165.2 1065 60.6
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1109.7 811 71.4
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 3.2e-264 916.0 572 80.9
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 2.5e-253 879.8 1245 40.6
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.1e-251 874.4 502 86.1
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-220 770.0 685 58.4
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 2.1e-215 753.8 527 73.1
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.8e-193 679.9 455 77.4
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.1e-182 643.7 389 83.8
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 2.7e-130 471.1 359 68.0
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.5e-117 428.7 313 71.9
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 9.7e-104 382.9 270 72.2
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 5.5e-83 313.9 480 42.7
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 9.2e-70 270.0 170 75.3
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 8.6e-68 263.5 170 74.1
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 3.3e-67 261.5 170 73.5
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 9.8e-64 250.0 138 91.3
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 2.1e-58 232.3 234 55.1
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 7.3e-51 207.2 116 83.6
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 7.6e-40 170.6 91 85.7
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 3.2e-38 165.2 184 53.8
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.1e-37 162.5 150 62.7
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 2.6e-32 145.6 99 67.7
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.3e-23 116.7 104 56.7


User provided reference genes

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