Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 5.3e-108 394.4 207 100.0
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 6.2e-24 115.2 212 37.3
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 2.0e-22 110.2 236 38.1
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.3e-21 107.5 224 38.8
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 1.3e-21 107.5 221 39.8
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 3.7e-21 105.9 236 35.6
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 4.9e-21 105.5 209 36.8
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.4e-20 104.0 222 36.9
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.6e-19 100.5 119 50.4
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.1e-19 100.1 237 34.2
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.3e-18 97.4 237 33.3
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.7e-18 97.1 236 34.7
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 3.0e-18 96.3 237 34.6
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 8.6e-18 94.7 207 37.2
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 1.5e-17 94.0 216 37.0
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 9.5e-17 91.3 219 34.2
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.6e-16 90.5 219 34.7
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 1.6e-16 90.5 219 34.2
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 2.1e-16 90.1 215 34.4
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 5.2e-15 85.5 66 60.6
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 5.2e-15 85.5 228 33.8
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 6.8e-15 85.1 55 67.3
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 8.9e-15 84.7 216 33.3
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 1.2e-14 84.3 215 32.6
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.5e-14 84.0 195 34.4
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.0e-14 83.6 205 37.6
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 4.4e-14 82.4 229 32.8
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 7.6e-14 81.6 220 31.8
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 7.6e-14 81.6 142 37.3
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 2.9e-13 79.7 206 30.6
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 2.9e-13 79.7 222 31.5
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 4.9e-13 79.0 212 31.1
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 1.1e-12 77.8 219 33.8
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 3.2e-12 76.3 225 30.7
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 7.1e-12 75.1 226 30.5
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 7.1e-12 75.1 217 30.0
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 2.3e-10 70.1 214 29.4
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 2.3e-10 70.1 218 27.5
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 3.9e-10 69.3 76 47.4
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 3.9e-10 69.3 192 31.2
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 1.1e-09 67.8 192 30.7
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 1.9e-09 67.0 218 30.7
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 2.5e-09 66.6 214 29.9
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 2.5e-09 66.6 195 30.3
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 3.3e-09 66.2 230 29.1
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 1.6e-08 63.9 217 28.6
Gohir.A05G040950 Gossypium hirsutum HOM05D007827 ORTHO05D009749 6.2e-08 62.0 185 30.3
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 6.2e-08 62.0 206 30.1
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 8.1e-08 61.6 140 32.1
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 1.1e-07 61.2 169 30.2
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 1.1e-07 61.2 64 48.4
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 1.4e-07 60.8 121 36.4
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 1.4e-07 60.8 242 31.0
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 1.4e-07 60.8 193 30.6
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 3.1e-07 59.7 218 27.5
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 9.0e-07 58.2 56 48.2
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 1.2e-06 57.8 164 31.7
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 1.2e-06 57.8 160 28.1
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 2.0e-06 57.0 205 30.7
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 2.0e-06 57.0 151 31.1
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 2.6e-06 56.6 244 29.9
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 2.6e-06 56.6 219 28.3
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 4.4e-06 55.8 43 55.8
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 5.8e-06 55.5 246 30.1


User provided reference genes

Program Settings