Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 1.1e-167 593.2 292 100.0
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 1.7e-149 532.7 292 86.3
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 1.1e-148 530.0 290 86.6
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 1.9e-148 529.3 289 87.5
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 2.8e-147 525.4 292 86.3
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 3.1e-146 521.9 292 83.9
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 5.3e-146 521.2 292 84.2
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 5.3e-146 521.2 292 84.2
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 5.3e-146 521.2 292 85.6
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 6.9e-146 520.8 292 85.6
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 6.9e-146 520.8 290 84.8
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 2.0e-145 519.2 290 85.9
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 2.0e-145 519.2 292 84.6
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 2.6e-145 518.8 290 84.1
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 4.5e-145 518.1 292 84.2
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 4.5e-145 518.1 292 84.6
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 9.9e-145 516.9 292 83.9
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 1.3e-144 516.5 292 84.2
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 1.3e-144 516.5 292 84.2
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 2.9e-144 515.4 292 83.9
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 2.9e-144 515.4 292 83.9
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 2.9e-144 515.4 292 83.6
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 3.8e-144 515.0 292 83.6
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 4.9e-144 514.6 288 84.0
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 6.4e-144 514.2 292 83.2
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 6.4e-144 514.2 292 83.6
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 1.1e-143 513.5 292 83.6
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 2.4e-143 512.3 292 83.2
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 2.4e-143 512.3 290 83.4
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 4.2e-143 511.5 290 82.8
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 4.2e-143 511.5 292 82.9
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 4.2e-143 511.5 292 83.6
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.6e-142 509.6 288 83.3
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 2.7e-142 508.8 292 82.9
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 7.9e-142 507.3 290 82.1
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 1.0e-141 506.9 294 83.0
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 1.3e-141 506.5 292 82.5
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 1.3e-141 506.5 290 82.4
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.8e-141 506.1 290 82.8
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 2.3e-141 505.8 292 82.9
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 2.3e-141 505.8 292 82.5
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 3.9e-141 505.0 290 83.1
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 6.7e-141 504.2 292 82.2
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 8.7e-141 503.8 292 81.5
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.1e-140 503.4 288 82.3
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.1e-140 503.4 292 81.8
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 2.5e-140 502.3 280 84.3
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 4.3e-140 501.5 290 80.3
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 4.3e-140 501.5 292 83.6
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 5.6e-140 501.1 292 81.8
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 5.6e-140 501.1 292 81.8
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 7.4e-140 500.7 288 81.6
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 9.6e-140 500.4 290 83.1
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 2.8e-139 498.8 288 80.9
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 3.7e-139 498.4 287 82.2
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 6.2e-139 497.7 291 81.1
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 8.1e-139 497.3 290 79.3
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 8.1e-139 497.3 290 79.3
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 8.1e-139 497.3 290 79.7
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 8.1e-139 497.3 288 80.9
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 1.1e-138 496.9 290 80.3
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 1.1e-138 496.9 287 81.2
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.4e-138 496.5 292 81.5
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.8e-138 496.1 292 81.5
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.8e-138 496.1 292 81.5
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 3.1e-138 495.4 292 79.5
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 3.1e-138 495.4 292 78.8
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 3.1e-138 495.4 290 81.4
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 4.0e-138 495.0 292 78.8
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 4.0e-138 495.0 292 81.2
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 5.3e-138 494.6 290 79.3
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 5.3e-138 494.6 288 79.9
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 9.0e-138 493.8 289 81.0
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 9.0e-138 493.8 291 81.4
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.2e-137 493.4 292 78.4
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.2e-137 493.4 321 74.5
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 1.5e-137 493.0 292 78.4
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 1.5e-137 493.0 290 80.3
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 1.5e-137 493.0 290 80.3
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 2.0e-137 492.7 292 78.8
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 2.6e-137 492.3 292 78.1
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.6e-137 492.3 289 81.0
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 3.4e-137 491.9 290 78.6
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 5.8e-137 491.1 292 78.4
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.7e-136 489.6 292 80.1
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 4.9e-136 488.0 292 78.1
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.1e-135 486.9 287 81.5
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 1.4e-135 486.5 290 79.3
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 2.5e-135 485.7 290 76.9
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 2.5e-135 485.7 290 76.9
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 5.5e-135 484.6 290 76.6
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 5.5e-135 484.6 290 76.6
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 2.1e-134 482.6 287 77.0
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 3.5e-134 481.9 272 84.2
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.3e-133 479.9 292 79.8
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 3.3e-132 475.3 291 78.7
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 1.6e-131 473.0 289 76.8
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 2.4e-130 469.2 274 81.8
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 3.1e-130 468.8 290 77.6
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 6.9e-130 467.6 271 82.3
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 6.9e-130 467.6 289 77.5
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 3.4e-129 465.3 255 84.7
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 7.6e-129 464.2 292 77.1
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 2.2e-128 462.6 272 80.9
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 2.9e-128 462.2 292 76.7
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.8e-128 461.8 278 79.5
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.9e-127 459.5 294 73.5
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 3.6e-126 455.3 313 73.8
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.1e-122 443.7 292 75.0
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.3e-120 436.8 271 78.6
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 3.6e-118 428.7 286 71.3
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 1.5e-116 423.3 309 68.3
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 5.7e-116 421.4 285 69.1
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 2.6e-113 412.5 281 68.0
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.1e-110 402.9 271 69.7
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 2.7e-110 402.5 267 70.8
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 4.5e-105 385.2 281 64.1
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.3e-99 367.1 223 77.6
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.8e-93 346.7 321 58.9
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 3.7e-91 339.0 190 85.8
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 2.0e-84 316.6 186 82.8
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.0e-84 316.6 181 85.1
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 4.1e-82 308.9 290 52.4
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 3.5e-81 305.8 294 54.1
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 4.5e-81 305.4 188 77.7
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 5.6e-79 298.5 290 54.1
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 2.6e-76 289.7 173 80.3
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 2.1e-70 270.0 293 46.4
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 3.0e-56 223.0 164 66.5
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.6e-56 221.9 310 45.2
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.9e-51 206.5 224 51.8
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.2e-49 201.1 221 51.6
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 3.1e-45 186.4 106 80.2
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.1e-41 173.7 101 83.2
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.5e-41 172.9 102 81.4
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.6e-39 165.6 97 82.5
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 2.7e-25 120.2 76 78.9
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.3e-22 111.3 97 63.9
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 8.2e-22 108.6 216 35.2
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 1.6e-09 67.8 51 58.8
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 5.1e-08 62.8 40 82.5


User provided reference genes

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