Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 3.4e-65 251.5 127 100.0
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 3.8e-40 168.3 105 80.0
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 6.4e-40 167.5 125 67.2
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 8.4e-40 167.2 98 82.7
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.1e-39 166.8 122 69.7
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 2.4e-39 165.6 108 75.9
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 4.2e-39 164.9 108 72.2
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 9.3e-39 163.7 122 68.9
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 9.3e-39 163.7 122 68.9
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 2.1e-38 162.5 127 66.1
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 2.1e-38 162.5 100 79.0
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 4.6e-38 161.4 108 72.2
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 6.0e-38 161.0 98 79.6
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 7.9e-38 160.6 120 66.7
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 7.9e-38 160.6 99 78.8
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 1.0e-37 160.2 117 67.5
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.3e-37 159.8 121 67.8
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 1.8e-37 159.5 99 75.8
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.8e-37 159.5 121 66.9
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 1.8e-37 159.5 98 77.6
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 1.8e-37 159.5 97 79.4
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 2.3e-37 159.1 122 66.4
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 2.3e-37 159.1 108 69.4
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 3.0e-37 158.7 114 71.1
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 5.1e-37 157.9 105 74.3
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 6.7e-37 157.5 106 71.7
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.1e-36 156.8 130 63.8
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 1.1e-36 156.8 122 64.8
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 1.1e-36 156.8 100 76.0
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 1.1e-36 156.8 98 79.6
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 1.5e-36 156.4 110 68.2
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 1.5e-36 156.4 95 75.8
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 1.9e-36 156.0 120 66.7
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 2.5e-36 155.6 102 72.5
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 2.5e-36 155.6 98 75.5
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 3.3e-36 155.2 99 77.8
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 4.3e-36 154.8 121 63.6
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 5.6e-36 154.5 110 66.4
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 5.6e-36 154.5 101 70.3
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 7.4e-36 154.1 109 67.0
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 7.4e-36 154.1 107 71.0
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 9.6e-36 153.7 99 71.7
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 9.6e-36 153.7 101 72.3
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 1.3e-35 153.3 106 70.8
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 1.6e-35 152.9 101 74.3
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.6e-35 152.9 99 73.7
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 2.1e-35 152.5 98 73.5
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 2.8e-35 152.1 121 63.6
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 2.8e-35 152.1 115 67.0
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 6.2e-35 151.0 109 66.1
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 6.2e-35 151.0 98 75.5
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 6.2e-35 151.0 98 74.5
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 8.1e-35 150.6 103 68.9
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 1.1e-34 150.2 98 73.5
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 1.4e-34 149.8 99 73.7
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 5.3e-34 147.9 100 75.0
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 6.9e-34 147.5 99 70.7
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 6.9e-34 147.5 98 72.4
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 9.0e-34 147.1 111 59.5
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 1.2e-33 146.7 99 71.7
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 3.4e-33 145.2 98 67.3
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 4.5e-33 144.8 98 69.4
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 9.9e-33 143.7 135 60.0
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 9.9e-33 143.7 98 67.3
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 1.7e-32 142.9 98 67.3
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 2.2e-32 142.5 98 69.4
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 2.2e-32 142.5 123 62.6
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 2.2e-32 142.5 98 69.4
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 2.9e-32 142.1 100 69.0
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 6.4e-32 141.0 97 67.0
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 6.4e-32 141.0 98 70.4
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 1.1e-31 140.2 118 58.5
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 1.1e-31 140.2 115 59.1
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.1e-31 140.2 98 67.3
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 1.4e-31 139.8 98 66.3
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.4e-31 139.8 98 66.3
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.4e-31 139.8 98 66.3
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 1.4e-31 139.8 98 68.4
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 1.9e-31 139.4 98 66.3
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 1.9e-31 139.4 97 70.1
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 3.2e-31 138.7 98 64.3
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 3.2e-31 138.7 93 72.0
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 4.2e-31 138.3 98 65.3
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 5.5e-31 137.9 98 64.3
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 7.1e-31 137.5 113 58.4
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 7.1e-31 137.5 122 57.4
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 9.3e-31 137.1 122 57.4
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 1.2e-30 136.7 98 67.3
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 1.6e-30 136.3 120 55.0
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 1.6e-30 136.3 100 65.0
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 1.6e-30 136.3 98 67.3
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 2.1e-30 136.0 102 63.7
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 2.1e-30 136.0 113 58.4
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 6.0e-30 134.4 97 68.0
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.0e-29 133.7 149 49.7
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 1.3e-29 133.3 125 52.8
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 1.8e-29 132.9 98 62.2
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 1.8e-29 132.9 174 44.3
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 8.7e-29 130.6 129 55.8
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 8.7e-29 130.6 108 60.2
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 5.6e-28 127.9 99 63.6
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.3e-27 126.7 95 67.4
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 1.4e-26 123.2 97 61.9
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 1.0e-24 117.1 74 74.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 8.4e-24 114.0 73 72.6
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 5.5e-23 111.3 177 38.4
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 7.1e-23 110.9 103 56.3
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 9.3e-23 110.5 107 56.1
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 3.3e-20 102.1 61 78.7
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 7.4e-20 100.9 102 49.0
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 2.0e-17 92.8 101 46.5
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 2.0e-17 92.8 55 83.6
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 3.4e-17 92.0 56 75.0
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 3.4e-17 92.0 59 74.6
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 3.8e-16 88.6 98 39.8
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 7.2e-15 84.3 87 43.7
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 4.6e-14 81.6 94 44.7
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 8.8e-13 77.4 72 56.9
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.4e-10 70.1 42 73.8
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 4.1e-10 68.6 95 40.0
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 2.9e-08 62.4 96 32.3


User provided reference genes

Program Settings