Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003054 Daucus carota HOM05D004383 ORTHO05D005050 3.0e-99 365.2 181 100.0
Cc00_g24580 Coffea canephora HOM05D004383 ORTHO05D005050 6.9e-80 300.8 168 88.1
CiPaw.07G231900 Carya illinoinensis HOM05D004383 ORTHO05D005050 1.2e-79 300.1 168 89.9
Manes.16G131700 Manihot esculenta HOM05D004383 ORTHO05D005050 2.0e-79 299.3 168 88.1
CSS0047262 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 2.6e-79 298.9 168 88.7
Manes.03G007300 Manihot esculenta HOM05D004383 ORTHO05D005050 4.5e-79 298.1 168 88.1
QL02p018464 Quercus lobata HOM05D004383 ORTHO05D005050 5.9e-79 297.7 168 88.1
Thecc.09G012700 Theobroma cacao HOM05D004383 ORTHO05D005050 5.9e-79 297.7 168 88.7
CiPaw.08G004800 Carya illinoinensis HOM05D004383 ORTHO05D005050 1.0e-78 297.0 168 88.1
Ciclev10009603m.g Citrus clementina HOM05D004383 ORTHO05D005050 1.3e-78 296.6 167 88.6
Nitab4.5_0001362g0040 Nicotiana tabacum HOM05D004383 ORTHO05D005050 1.7e-78 296.2 171 85.4
Actinidia14139 Actinidia chinensis HOM05D004383 ORTHO05D005050 2.2e-78 295.8 167 87.4
Gohir.A05G061400 Gossypium hirsutum HOM05D004383 ORTHO05D005050 2.2e-78 295.8 168 87.5
Gorai.009G064600 Gossypium raimondii HOM05D004383 ORTHO05D005050 2.2e-78 295.8 168 87.5
Lj7A737G42 Lonicera japonica HOM05D004383 ORTHO05D005050 2.2e-78 295.8 167 89.2
Atru.chr7.2584 Acer truncatum HOM05D004383 ORTHO05D005050 2.9e-78 295.4 168 88.1
Nitab4.5_0000264g0060 Nicotiana tabacum HOM05D004383 ORTHO05D005050 3.8e-78 295.0 168 86.3
GSVIVG01035992001 Vitis vinifera HOM05D004383 ORTHO05D005050 3.8e-78 295.0 167 88.6
CSS0025027 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 6.5e-78 294.3 167 87.4
COL.COLO4_18979 Corchorus olitorius HOM05D002641 ORTHO05D005050 8.5e-78 293.9 168 87.5
Eucgr.C04036 Eucalyptus grandis HOM05D004383 ORTHO05D005050 8.5e-78 293.9 168 85.7
Hma1.2p1_0355F.1_g133920 Hydrangea macrophylla HOM05D004383 ORTHO05D005050 8.5e-78 293.9 167 88.6
Sopen08g002600 Solanum pennellii HOM05D004383 ORTHO05D005050 8.5e-78 293.9 168 85.7
PGSC0003DMG400026285 Solanum tuberosum HOM05D004383 ORTHO05D005050 8.5e-78 293.9 168 85.7
arahy.Tifrunner.gnm1.ann1.S5PPFL Arachis hypogaea HOM05D004383 ORTHO05D005050 2.5e-77 292.4 169 85.8
Gohir.D06G105600 Gossypium hirsutum HOM05D004383 ORTHO05D005050 3.2e-77 292.0 168 86.9
Duzib168G1681 Durio zibethinus HOM05D004383 ORTHO05D005050 4.2e-77 291.6 168 86.9
Peaxi162Scf00045g01943 Petunia axillaris HOM05D004383 ORTHO05D005050 4.2e-77 291.6 168 85.1
arahy.Tifrunner.gnm1.ann1.W5C21C Arachis hypogaea HOM05D004383 ORTHO05D005050 5.5e-77 291.2 169 85.2
Gohir.D05G063900 Gossypium hirsutum HOM05D004383 ORTHO05D005050 5.5e-77 291.2 168 86.3
Sabra06G0208900 Salix brachista HOM05D004383 ORTHO05D005050 7.2e-77 290.8 185 79.5
Solyc08g006650.3 Solanum lycopersicum HOM05D004383 ORTHO05D005050 7.2e-77 290.8 168 85.1
CAN.G285.20 Capsicum annuum HOM05D004383 ORTHO05D005050 9.4e-77 290.4 168 83.9
Gorai.010G120200 Gossypium raimondii HOM05D004383 ORTHO05D005050 9.4e-77 290.4 168 86.3
FvH4_3g24420 Fragaria vesca HOM05D004383 ORTHO05D005050 1.2e-76 290.0 168 84.5
RcHm_v2.0_Chr6g0299241 Rosa chinensis HOM05D004383 ORTHO05D005050 1.2e-76 290.0 168 85.1
MELO3C016948.2 Cucumis melo HOM05D004383 ORTHO05D005050 1.6e-76 289.7 168 85.1
Duzib187G0841 Durio zibethinus HOM05D004383 ORTHO05D005050 1.6e-76 289.7 168 85.7
TWI34G1410 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 1.6e-76 289.7 168 86.3
Potri.006G266300 Populus trichocarpa HOM05D004383 ORTHO05D005050 2.1e-76 289.3 168 85.1
Potri.018G016800 Populus trichocarpa HOM05D004383 ORTHO05D005050 2.1e-76 289.3 168 84.5
TWI32G1179 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 2.1e-76 289.3 168 87.5
vmacro05117 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 2.1e-76 289.3 167 86.2
ECA238G1890 Erigeron canadensis HOM05D004383 ORTHO05D005050 2.7e-76 288.9 166 85.5
Sabra18G0020200 Salix brachista HOM05D004383 ORTHO05D005050 2.7e-76 288.9 168 84.5
FAN16G3501 Fragaria x ananassa HOM05D004383 ORTHO05D005050 3.6e-76 288.5 168 83.3
FAN21G1236 Fragaria x ananassa HOM05D004383 ORTHO05D005050 3.6e-76 288.5 168 83.9
ClCG05G016150 Citrullus lanatus HOM05D004383 ORTHO05D005050 4.7e-76 288.1 168 85.1
Lsat_1_v5_gn_8_16540 Lactuca sativa HOM05D004383 ORTHO05D005050 6.1e-76 287.7 166 84.9
Nn3g19885 Nelumbo nucifera HOM05D004383 ORTHO05D005050 6.1e-76 287.7 166 83.7
CsaV3_4G036420 Cucumis sativus L. HOM05D004383 ORTHO05D005050 1.0e-75 287.0 168 84.5
PGR044G2662 Punica granatum HOM05D004383 ORTHO05D005050 1.0e-75 287.0 168 84.5
CSS0026414 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 1.4e-75 286.6 167 86.2
MD15G1042900 Malus domestica HOM05D004383 ORTHO05D005050 1.4e-75 286.6 168 83.9
Hund25610 Selenicereus undatus HOM05D004383 ORTHO05D005050 1.4e-75 286.6 169 82.8
Cpa.g.sc148.37 Carica papaya HOM05D004383 ORTHO05D005050 3.0e-75 285.4 166 85.5
Prupe.1G396200 Prunus persica HOM05D004383 ORTHO05D005050 3.0e-75 285.4 168 83.3
CANSAT64G0435 Cannabis sativa HOM05D004383 ORTHO05D005050 3.9e-75 285.0 168 83.9
Sed0012000 Sechium edule HOM05D004383 ORTHO05D005050 5.1e-75 284.6 168 83.3
Oeu021906.1 Olea europaea HOM05D004383 ORTHO05D005050 1.5e-74 283.1 168 82.1
TAR625G0171 Trochodendron aralioides HOM05D004383 ORTHO05D005050 1.5e-74 283.1 167 83.2
TAR625G1552 Trochodendron aralioides HOM05D004383 ORTHO05D005050 1.5e-74 283.1 167 83.2
Nn1g03128 Nelumbo nucifera HOM05D004383 ORTHO05D005050 2.0e-74 282.7 166 84.9
Haze_21384 Corylus avellana HOM05D004383 ORTHO05D005050 4.4e-74 281.6 195 75.4
SalBow8G1520 Salvia bowleyana HOM05D004383 ORTHO05D005050 7.4e-74 280.8 178 77.5
Phvul.001G042400 Phaseolus vulgaris HOM05D004383 ORTHO05D005050 1.3e-73 280.0 169 84.0
ECA233G1452 Erigeron canadensis HOM05D004383 ORTHO05D005050 2.8e-73 278.9 156 86.5
VMungo0647G1739 Vigna mungo HOM05D004383 ORTHO05D005050 2.8e-73 278.9 169 83.4
AUR62024788 Chenopodium quinoa HOM05D004383 ORTHO05D005050 3.7e-73 278.5 168 79.2
AUR62032433 Chenopodium quinoa HOM05D004383 ORTHO05D005050 4.8e-73 278.1 168 79.2
Ah.12g060630 Amaranthus hybridus HOM05D004383 ORTHO05D005050 6.3e-73 277.7 168 80.4
Sed0009310 Sechium edule HOM05D004383 ORTHO05D005050 6.3e-73 277.7 168 81.5
Rhsim07G0166500 Rhododendron simsii HOM05D004383 ORTHO05D005050 1.1e-72 276.9 189 76.7
Glyma.17G222100 Glycine max HOM05D004383 ORTHO05D005050 1.8e-72 276.2 169 82.8
HanXRQChr12g0370101 Helianthus annuus HOM05D004383 ORTHO05D005050 1.8e-72 276.2 157 84.1
EL10Ac2g02480 Beta vulgaris HOM05D004383 ORTHO05D005050 4.1e-72 275.0 168 79.2
CDE05G2494 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 4.1e-72 275.0 165 83.6
Migut.E01443 Erythranthe guttata HOM05D004383 ORTHO05D005050 4.1e-72 275.0 168 81.5
FAN02G2967 Fragaria x ananassa HOM05D004383 ORTHO05D005050 5.3e-72 274.6 159 84.3
FAN05G0819 Fragaria x ananassa HOM05D004383 ORTHO05D005050 5.3e-72 274.6 159 84.3
MBI14_g31383_MAGBIO Magnolia biondii HOM05D004383 ORTHO05D005050 5.3e-72 274.6 166 82.5
Glyma.14G103800 Glycine max HOM05D004383 ORTHO05D005050 7.0e-72 274.2 169 82.2
FvH4_6g27370 Fragaria vesca HOM05D004383 ORTHO05D005050 1.2e-71 273.5 159 83.6
THA.LOC104799028 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 1.2e-71 273.5 168 80.4
TPR.G38877 Trifolium pratense HOM05D004383 ORTHO05D005050 1.2e-71 273.5 169 82.2
Medtr1g013660 Medicago truncatula HOM05D004383 ORTHO05D005050 1.5e-71 273.1 169 82.2
Thhalv10014802m.g Eutrema salsugineum HOM05D004383 ORTHO05D005050 2.0e-71 272.7 168 80.4
Oeu010290.1 Olea europaea HOM05D004383 ORTHO05D005050 2.0e-71 272.7 168 78.0
Aa31LG3G16320 Aethionema arabicum HOM05D004383 ORTHO05D005050 2.6e-71 272.3 166 80.1
CDE02G0236 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 2.6e-71 272.3 165 82.4
THA.LOC104824960 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 2.6e-71 272.3 168 79.8
Psat6g025120 Pisum sativum HOM05D004383 ORTHO05D005050 3.5e-71 271.9 169 82.2
MSTRG.13961 Avicennia marina HOM05D004383 ORTHO05D005050 5.9e-71 271.2 168 79.2
SGA_v2.0_scaffold4G02162 Striga asiatica HOM05D004383 ORTHO05D005050 5.9e-71 271.2 168 81.0
BcaB01g06278 Brassica carinata HOM05D004383 ORTHO05D005050 7.7e-71 270.8 168 79.2
Lj6g0009294 Lotus japonicus HOM05D004383 ORTHO05D005050 7.7e-71 270.8 170 80.0
Carub.0006s0928 Capsella rubella HOM05D004383 ORTHO05D005050 1.0e-70 270.4 168 79.8
Lalb_Chr24g0401921 Lupinus albus HOM05D004383 ORTHO05D005050 1.0e-70 270.4 170 78.2
Sp6g32680 Schrenkiella parvula HOM05D004383 ORTHO05D005050 1.0e-70 270.4 168 79.2
BcaB01g05499 Brassica carinata HOM05D004383 ORTHO05D005050 1.3e-70 270.0 168 79.8
CARHR202520 Cardamine hirsuta HOM05D004383 ORTHO05D005050 1.3e-70 270.0 168 79.8
Ca_13075_v3 Cicer arietinum L. HOM05D004383 ORTHO05D005050 1.3e-70 270.0 168 82.7
PSO017G0706 Papaver somniferum HOM05D004383 ORTHO05D005050 1.3e-70 270.0 169 81.7
PSO170G1218 Papaver somniferum HOM05D004383 ORTHO05D005050 1.3e-70 270.0 169 81.7
BcaB05g21506 Brassica carinata HOM05D004383 ORTHO05D005050 1.7e-70 269.6 168 78.6
ATR0580G398 Amborella trichopoda HOM05D004383 ORTHO05D005050 2.2e-70 269.2 165 80.0
SGA_v2.0_scaffold169G38599 Striga asiatica HOM05D004383 ORTHO05D005050 2.9e-70 268.9 168 79.8
AL6G21360 Arabidopsis lyrata HOM05D004383 ORTHO05D005050 5.0e-70 268.1 168 79.2
AT5G10780 Arabidopsis thaliana HOM05D004383 ORTHO05D005050 5.0e-70 268.1 168 79.2
BolC3t13057H Brassica oleracea HOM05D004383 ORTHO05D005050 1.1e-69 266.9 168 79.2
C03p05470 Brassica napus HOM05D004383 ORTHO05D005050 3.2e-69 265.4 160 80.6
HanXRQChr07g0201211 Helianthus annuus HOM05D004383 ORTHO05D005050 3.2e-69 265.4 166 80.1
unitig_32.g11121 Utricularia gibba HOM05D004383 ORTHO05D005050 3.2e-69 265.4 168 79.8
BcaC03g13332 Brassica carinata HOM05D004383 ORTHO05D005050 4.2e-69 265.0 169 78.1
A02p00660 Brassica napus HOM05D004383 ORTHO05D005050 4.2e-69 265.0 169 78.1
C02p04660 Brassica napus HOM05D004383 ORTHO05D005050 4.2e-69 265.0 169 78.1
BolC2t06425H Brassica oleracea HOM05D004383 ORTHO05D003478 4.2e-69 265.0 169 78.1
FAN14G2933 Fragaria x ananassa HOM05D004383 ORTHO05D005050 4.2e-69 265.0 159 81.8
A03p04760 Brassica napus HOM05D004383 ORTHO05D005050 5.5e-69 264.6 169 78.1
BraA02t05050Z Brassica rapa HOM05D004383 ORTHO05D005050 1.2e-68 263.5 169 77.5
BraA03t09816Z Brassica rapa HOM05D004383 ORTHO05D005050 4.7e-68 261.5 169 77.5
vmacro11269 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 1.0e-67 260.4 265 56.2
Migut.A00383 Erythranthe guttata HOM05D004383 ORTHO05D005050 5.2e-67 258.1 168 78.0
MD08G1052600 Malus domestica HOM05D004383 ORTHO05D005050 5.2e-67 258.1 168 78.6
Dinv10290 Davidia involucrata HOM05D004383 ORTHO05D005050 1.3e-65 253.4 149 85.2
SEGI_36915 Sequoiadendron giganteum HOM05D004383 ORTHO05D005050 1.8e-64 249.6 164 75.0
Sc23g0006160 Simmondsia chinensis HOM05D004383 ORTHO05D005050 1.6e-63 246.5 146 82.9
Os03g0360500 Oryza sativa ssp. japonica HOM05D004383 ORTHO05D005050 7.7e-63 244.2 166 73.5
Zm00001eb394360 Zea mays HOM05D004383 ORTHO05D005050 2.9e-62 242.3 165 72.1
SMO367G0045 Selaginella moellendorffii HOM05D004383 ORTHO05D005050 5.2e-59 231.5 166 68.1
Pp3c18_15950 Physcomitrium patens HOM05D004383 ORTHO05D005050 4.4e-58 228.4 166 66.9
Actinidia10531 Actinidia chinensis HOM05D004383 ORTHO05D005050 1.3e-57 226.9 165 72.7
Mapoly0039s0015 Marchantia polymorpha HOM05D004383 ORTHO05D005050 8.3e-57 224.2 161 66.5
AagrBONN_evm.TU.Sc2ySwM_368.2778 Anthoceros agrestis HOM05D004383 ORTHO05D005050 1.4e-56 223.4 164 67.1
CBR_g29297 Chara braunii HOM05D004383 ORTHO05D005050 1.5e-45 186.8 160 58.1
Aqoxy7G03322 Aquilegia oxysepala HOM05D004383 ORTHO05D005050 4.2e-45 185.3 169 60.4
BcaNung06638 Brassica carinata HOM05D004383 ORTHO05D005050 1.5e-42 176.8 126 70.6
Dinv01903 Davidia involucrata HOM05D004383 ORTHO05D005050 2.2e-41 172.9 99 88.9
HPP92_021944 Vanilla planifolia HOM05D004383 ORTHO05D005050 4.5e-39 165.2 113 73.5
TAR383G0062 Trochodendron aralioides HOM05D004383 ORTHO05D005050 3.3e-37 159.1 100 81.0
HPP92_021971 Vanilla planifolia HOM05D004383 ORTHO05D005050 2.0e-31 139.8 80 85.0
PRCOL_00000905 Prasinoderma coloniale HOM05D004383 ORTHO05D005050 1.6e-28 130.2 156 42.3
DCAR_031730 Daucus carota HOM05D004383 ORTHO05D005050 9.8e-26 120.9 100 65.0
MCO09G762 Micromonas commoda HOM05D004383 ORTHO05D005050 2.2e-25 119.8 166 39.8
arahy.Tifrunner.gnm1.ann1.76P32W Arachis hypogaea HOM05D004383 ORTHO05D005050 3.2e-24 115.9 75 77.3
arahy.Tifrunner.gnm1.ann1.90HH72 Arachis hypogaea HOM05D004383 ORTHO05D005050 3.2e-24 115.9 75 77.3
DCAR_030622 Daucus carota HOM05D001936 ORTHO05D005050 1.1e-21 107.5 83 71.1
TAR383G0705 Trochodendron aralioides HOM05D004383 ORTHO05D005050 1.2e-20 104.0 56 87.5
CSS0012906 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 1.6e-20 103.6 54 90.7
CSS0013447 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 2.1e-20 103.2 55 85.5
Medtr8g027900 Medicago truncatula HOM05D000337 ORTHO05D000297 1.8e-19 100.1 51 94.1
Oeu048647.1 Olea europaea HOM05D004383 ORTHO05D005050 2.2e-17 93.2 62 75.8
Cfa024789 Carpinus fangiana HOM05D004383 ORTHO05D005050 5.4e-16 88.6 165 33.9
Cre07.g351700 Chlamydomonas reinhardtii HOM05D004383 ORTHO05D005050 9.2e-16 87.8 159 37.1
Lalb_Chr15g0080471 Lupinus albus HOM05D004383 ORTHO05D005050 1.9e-13 80.1 90 50.0
Lalb_Chr15g0078021 Lupinus albus HOM05D004383 ORTHO05D005050 2.4e-11 73.2 88 48.9
arahy.Tifrunner.gnm1.ann1.54XXT5 Arachis hypogaea HOM05D004383 ORTHO05D005050 3.1e-11 72.8 37 91.9
Atru.chr7.2585 Acer truncatum HOM05D004383 ORTHO05D005050 1.2e-10 70.9 45 75.6
Atru.chr7.2578 Acer truncatum HOM05D004610 ORTHO05D001148 1.5e-10 70.5 51 70.6
MD10G1133700 Malus domestica HOM05D004383 ORTHO05D005050 1.7e-09 67.0 55 63.6
Lalb_Chr10g0093521 Lupinus albus HOM05D004383 ORTHO05D005050 3.8e-09 65.9 38 86.8
Lalb_Chr01g0013281 Lupinus albus HOM05D004383 ORTHO05D005050 1.9e-08 63.5 50 64.0
MD10G1176800 Malus domestica HOM05D004383 ORTHO05D005050 4.2e-08 62.4 42 71.4
RcHm_v2.0_Chr3g0494951 Rosa chinensis HOM05D004383 ORTHO05D005050 4.2e-08 62.4 29 96.6
RcHm_v2.0_Chr4g0409071 Rosa chinensis HOM05D000467 ORTHO05D000379 6.6e-06 55.1 26 88.5


User provided reference genes

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