Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003045 Daucus carota HOM05D003491 ORTHO05D004293 5.3e-31 137.1 73 100.0
Dinv11598 Davidia involucrata HOM05D003491 ORTHO05D004293 1.3e-24 115.9 65 90.8
GSVIVG01017212001 Vitis vinifera HOM05D003491 ORTHO05D004293 1.3e-24 115.9 65 92.3
Lj9A504T65 Lonicera japonica HOM05D003491 ORTHO05D004293 1.7e-24 115.5 65 90.8
Actinidia14629 Actinidia chinensis HOM05D003491 ORTHO05D004293 2.2e-24 115.2 65 90.8
Actinidia15699 Actinidia chinensis HOM05D003491 ORTHO05D004293 2.2e-24 115.2 65 90.8
TAR383G0278 Trochodendron aralioides HOM05D003491 ORTHO05D004293 2.2e-24 115.2 65 92.3
Dinv30193 Davidia involucrata HOM05D004398 ORTHO05D004293 2.8e-24 114.8 65 89.2
Hma1.2p1_0000F.1_g001030 Hydrangea macrophylla HOM05D003491 ORTHO05D004293 2.8e-24 114.8 65 90.8
Peaxi162Scf00251g01120 Petunia axillaris HOM05D003491 ORTHO05D004293 3.7e-24 114.4 65 89.2
CSS0031636 Camellia sinensis var. sinensis HOM05D003491 ORTHO05D004293 4.9e-24 114.0 65 89.2
CAN.G211.2 Capsicum annuum HOM05D003491 ORTHO05D004293 6.3e-24 113.6 65 87.7
Hma1.2p1_0007F.1_g005180 Hydrangea macrophylla HOM05D003491 ORTHO05D004293 6.3e-24 113.6 65 89.2
Manes.16G118100 Manihot esculenta HOM05D003491 ORTHO05D004293 6.3e-24 113.6 65 89.2
Nitab4.5_0000620g0180 Nicotiana tabacum HOM05D003491 ORTHO05D004293 6.3e-24 113.6 65 90.8
Prupe.1G471600 Prunus persica HOM05D003491 ORTHO05D004293 6.3e-24 113.6 65 92.3
PGSC0003DMG400007564 Solanum tuberosum HOM05D003491 ORTHO05D004293 6.3e-24 113.6 65 90.8
PGSC0003DMG400028549 Solanum tuberosum HOM05D003491 ORTHO05D004293 6.3e-24 113.6 65 90.8
TAR626G1382 Trochodendron aralioides HOM05D003491 ORTHO05D004293 6.3e-24 113.6 65 90.8
CAN.G395.36 Capsicum annuum HOM05D003491 ORTHO05D004293 8.3e-24 113.2 65 89.2
Nitab4.5_0009276g0010 Nicotiana tabacum HOM05D003491 ORTHO05D004293 8.3e-24 113.2 65 89.2
Oeu020517.1 Olea europaea HOM05D003491 ORTHO05D004293 8.3e-24 113.2 66 87.9
Solyc08g067480.4 Solanum lycopersicum HOM05D003491 ORTHO05D004293 8.3e-24 113.2 65 87.7
Sopen06g025160 Solanum pennellii HOM05D003491 ORTHO05D004293 8.3e-24 113.2 65 89.2
Sopen08g021420 Solanum pennellii HOM05D003491 ORTHO05D004293 8.3e-24 113.2 65 87.7
Lj5A66T58 Lonicera japonica HOM05D003491 ORTHO05D004293 1.1e-23 112.8 65 89.2
vmacro12625 Vaccinium macrocarpon HOM05D003491 ORTHO05D004293 1.1e-23 112.8 65 87.7
Ciclev10009643m.g Citrus clementina HOM05D003491 ORTHO05D004293 1.4e-23 112.5 65 90.8
DCAR_006243 Daucus carota HOM05D003491 ORTHO05D004293 1.4e-23 112.5 65 90.8
Manes.03G018400 Manihot esculenta HOM05D003491 ORTHO05D004293 1.4e-23 112.5 65 87.7
Nitab4.5_0000508g0240 Nicotiana tabacum HOM05D003491 ORTHO05D004293 1.4e-23 112.5 65 86.2
Nitab4.5_0002339g0040 Nicotiana tabacum HOM05D003491 ORTHO05D004293 1.4e-23 112.5 65 86.2
Peaxi162Scf00207g00754 Petunia axillaris HOM05D003491 ORTHO05D004293 1.4e-23 112.5 65 89.2
Rhsim07G0146800 Rhododendron simsii HOM05D003491 ORTHO05D004293 1.4e-23 112.5 64 89.1
SalBow2G1989 Salvia bowleyana HOM05D003491 ORTHO05D004293 1.4e-23 112.5 65 89.2
PGSC0003DMG400025542 Solanum tuberosum HOM05D003491 ORTHO05D004293 1.4e-23 112.5 65 86.2
MSTRG.11107 Avicennia marina HOM05D003491 ORTHO05D004293 1.8e-23 112.1 65 87.7
MD08G1141700 Malus domestica HOM05D003491 ORTHO05D004293 1.8e-23 112.1 64 92.2
MD15G1118200 Malus domestica HOM05D003491 ORTHO05D004293 1.8e-23 112.1 64 92.2
Solyc06g067880.3 Solanum lycopersicum HOM05D003491 ORTHO05D004293 1.8e-23 112.1 65 87.7
Actinidia13267 Actinidia chinensis HOM05D003491 ORTHO05D004293 2.4e-23 111.7 65 86.2
Gohir.A08G091800 Gossypium hirsutum HOM05D003491 ORTHO05D004293 2.4e-23 111.7 65 89.2
Gohir.D08G107100 Gossypium hirsutum HOM05D003491 ORTHO05D004293 2.4e-23 111.7 65 89.2
Gorai.004G114500 Gossypium raimondii HOM05D003491 ORTHO05D004293 2.4e-23 111.7 65 89.2
Cpa.g.sc91.29 Carica papaya HOM05D003491 ORTHO05D004293 3.1e-23 111.3 65 87.7
Duzib168G0366 Durio zibethinus HOM05D003491 ORTHO05D004293 3.1e-23 111.3 65 87.7
FAN24G1679 Fragaria x ananassa HOM05D003491 ORTHO05D004293 3.1e-23 111.3 65 87.7
Thecc.09G147300 Theobroma cacao HOM05D003491 ORTHO05D004293 3.1e-23 111.3 65 87.7
FvH4_2g29800 Fragaria vesca HOM05D003491 ORTHO05D004293 4.1e-23 110.9 64 89.1
FAN15G2480 Fragaria x ananassa HOM05D003491 ORTHO05D004293 4.1e-23 110.9 64 89.1
FAN27G2386 Fragaria x ananassa HOM05D003491 ORTHO05D004293 4.1e-23 110.9 64 89.1
HanXRQChr03g0081341 Helianthus annuus HOM05D003491 ORTHO05D004293 4.1e-23 110.9 65 86.2
PSO339G4791 Papaver somniferum HOM05D003491 ORTHO05D004293 4.1e-23 110.9 65 86.2
PSO801G0434 Papaver somniferum HOM05D003491 ORTHO05D004293 4.1e-23 110.9 65 86.2
GSVIVG01035775001 Vitis vinifera HOM05D003491 ORTHO05D004293 4.1e-23 110.9 65 89.2
CSS0016532 Camellia sinensis var. sinensis HOM05D003491 ORTHO05D004293 5.4e-23 110.5 65 86.2
Cpa.g.sc603.4 Carica papaya HOM05D003491 ORTHO05D004293 5.4e-23 110.5 63 90.5
ECA233G0626 Erigeron canadensis HOM05D003491 ORTHO05D004293 5.4e-23 110.5 65 86.2
HanXRQChr02g0050661 Helianthus annuus HOM05D003491 ORTHO05D004293 5.4e-23 110.5 65 86.2
Rhsim02G0193000 Rhododendron simsii HOM05D003491 ORTHO05D004293 5.4e-23 110.5 65 84.6
Lsat_1_v5_gn_4_104721 Lactuca sativa HOM05D003491 ORTHO05D004293 7.0e-23 110.2 65 84.6
RcHm_v2.0_Chr6g0298821 Rosa chinensis HOM05D003491 ORTHO05D004293 7.0e-23 110.2 64 87.5
MSTRG.22716 Avicennia marina HOM05D003491 ORTHO05D004293 9.1e-23 109.8 65 86.2
MSTRG.9444 Avicennia marina HOM05D003491 ORTHO05D004293 9.1e-23 109.8 65 86.2
Lsat_1_v5_gn_6_21641 Lactuca sativa HOM05D003491 ORTHO05D004293 9.1e-23 109.8 65 86.2
Aqoxy7G01963 Aquilegia oxysepala HOM05D003491 ORTHO05D004293 1.6e-22 109.0 65 84.6
HanXRQChr13g0402461 Helianthus annuus HOM05D003491 ORTHO05D004293 1.6e-22 109.0 64 87.5
Cc04_g03810 Coffea canephora HOM05D003491 ORTHO05D004293 2.0e-22 108.6 61 91.8
Oeu052308.2 Olea europaea HOM05D003491 ORTHO05D004293 2.0e-22 108.6 65 84.6
SalBow2G0098 Salvia bowleyana HOM05D000011 ORTHO05D000018 2.0e-22 108.6 65 86.2
Sed0008081 Sechium edule HOM05D003491 ORTHO05D004293 2.0e-22 108.6 65 84.6
Cfa013196 Carpinus fangiana HOM05D003491 ORTHO05D004293 2.7e-22 108.2 61 91.8
CDE01G0121 Ceratophyllum demersum HOM05D003491 ORTHO05D004293 2.7e-22 108.2 61 90.2
Haze_21598 Corylus avellana HOM05D003491 ORTHO05D004293 2.7e-22 108.2 61 91.8
Glyma.14G127600 Glycine max HOM05D003491 ORTHO05D004293 2.7e-22 108.2 65 87.7
Glyma.17G206600 Glycine max HOM05D003491 ORTHO05D004293 2.7e-22 108.2 65 87.7
Gohir.A02G109706 Gossypium hirsutum HOM05D003491 ORTHO05D004293 2.7e-22 108.2 64 85.9
Gohir.D03G064500 Gossypium hirsutum HOM05D003491 ORTHO05D004293 2.7e-22 108.2 64 85.9
MBI04_g33817_MAGBIO Magnolia biondii HOM05D003491 ORTHO05D004293 2.7e-22 108.2 64 85.9
Phvul.001G054000 Phaseolus vulgaris HOM05D003491 ORTHO05D004293 2.7e-22 108.2 65 87.7
Sed0016723 Sechium edule HOM05D003491 ORTHO05D004293 2.7e-22 108.2 65 86.2
Atru.chr7.2353 Acer truncatum HOM05D003491 ORTHO05D004293 3.5e-22 107.8 65 87.7
EL10Ac2g02561 Beta vulgaris HOM05D003491 ORTHO05D004293 3.5e-22 107.8 61 90.2
Duzib150G0462 Durio zibethinus HOM05D003491 ORTHO05D004293 3.5e-22 107.8 64 84.4
Gorai.013G110300 Gossypium raimondii HOM05D003491 ORTHO05D004293 3.5e-22 107.8 63 87.3
PGR044G2143 Punica granatum HOM05D003491 ORTHO05D004293 3.5e-22 107.8 64 85.9
Sed0021950 Sechium edule HOM05D003491 ORTHO05D004293 3.5e-22 107.8 65 84.6
TAR636G0216 Trochodendron aralioides HOM05D003491 ORTHO05D004293 3.5e-22 107.8 61 90.2
VMungo0647G2507 Vigna mungo HOM05D003491 ORTHO05D004293 3.5e-22 107.8 65 87.7
ClCG08G013010 Citrullus lanatus HOM05D003491 ORTHO05D004293 4.5e-22 107.5 61 90.2
CsaV3_2G031740 Cucumis sativus L. HOM05D003491 ORTHO05D004293 4.5e-22 107.5 61 90.2
Os01g0610100 Oryza sativa ssp. japonica HOM05D003491 ORTHO05D004293 4.5e-22 107.5 65 86.2
Zm00001eb161810 Zea mays HOM05D003491 ORTHO05D004293 4.5e-22 107.5 65 86.2
Zm00001eb357970 Zea mays HOM05D003491 ORTHO05D004293 4.5e-22 107.5 65 86.2
MELO3C011225.2 Cucumis melo HOM05D003491 ORTHO05D004293 5.9e-22 107.1 61 90.2
Migut.I00813 Erythranthe guttata HOM05D003491 ORTHO05D004293 5.9e-22 107.1 65 84.6
Eucgr.C02831 Eucalyptus grandis HOM05D003491 ORTHO05D004293 5.9e-22 107.1 65 81.5
Potri.018G032600 Populus trichocarpa HOM05D003491 ORTHO05D004293 5.9e-22 107.1 61 90.2
SGA_v2.0_scaffold5G02647 Striga asiatica HOM05D003491 ORTHO05D004293 5.9e-22 107.1 66 84.8
Lalb_Chr14g0361951 Lupinus albus HOM05D003491 ORTHO05D004293 7.7e-22 106.7 65 83.1
TWI63G0930 Tripterygium wilfordii HOM05D003491 ORTHO05D004293 1.0e-21 106.3 65 81.5
Potri.006G248700 Populus trichocarpa HOM05D003491 ORTHO05D004293 1.3e-21 105.9 61 86.9
THA.LOC104803630 Tarenaya hassleriana HOM05D003491 ORTHO05D004293 1.3e-21 105.9 65 83.1
TWI34G0357 Tripterygium wilfordii HOM05D003491 ORTHO05D004293 1.3e-21 105.9 65 81.5
CiPaw.07G219300 Carya illinoinensis HOM05D003491 ORTHO05D004293 1.7e-21 105.5 65 81.5
unitig_21.g20349 Utricularia gibba HOM05D003491 ORTHO05D004293 1.7e-21 105.5 61 86.9
ECA232G3542 Erigeron canadensis HOM05D003491 ORTHO05D004293 2.3e-21 105.1 67 82.1
HPP92_003632 Vanilla planifolia HOM05D003491 ORTHO05D004293 2.3e-21 105.1 64 82.8
ATR0083G021 Amborella trichopoda HOM05D003491 ORTHO05D004293 2.9e-21 104.8 64 81.2
AUR62032356 Chenopodium quinoa HOM05D003491 ORTHO05D004293 2.9e-21 104.8 61 85.2
AUR62041851 Chenopodium quinoa HOM05D003491 ORTHO05D004293 2.9e-21 104.8 61 85.2
CsaV3_3G046610 Cucumis sativus L. HOM05D003491 ORTHO05D004293 2.9e-21 104.8 65 81.5
Sc23g0006960 Simmondsia chinensis HOM05D003491 ORTHO05D004293 2.9e-21 104.8 64 82.8
Medtr7g090330 Medicago truncatula HOM05D003491 ORTHO05D004293 3.8e-21 104.4 61 88.5
Psat6g030160 Pisum sativum HOM05D003491 ORTHO05D004293 3.8e-21 104.4 61 88.5
Hund25698 Selenicereus undatus HOM05D003491 ORTHO05D004293 3.8e-21 104.4 62 83.9
TPR.G15667 Trifolium pratense HOM05D003491 ORTHO05D004293 3.8e-21 104.4 61 88.5
Ah.12g063740 Amaranthus hybridus HOM05D003491 ORTHO05D004293 5.0e-21 104.0 61 85.2
arahy.Tifrunner.gnm1.ann1.IM4PDC Arachis hypogaea HOM05D003491 ORTHO05D004293 5.0e-21 104.0 61 88.5
Ca_12922_v3 Cicer arietinum L. HOM05D003491 ORTHO05D004293 5.0e-21 104.0 61 86.9
COL.COLO4_24008 Corchorus olitorius HOM05D003491 ORTHO05D004293 5.0e-21 104.0 61 86.9
Sabra06G0194600 Salix brachista HOM05D003491 ORTHO05D004293 5.0e-21 104.0 61 85.2
arahy.Tifrunner.gnm1.ann1.MW4ZUP Arachis hypogaea HOM05D003491 ORTHO05D004293 6.6e-21 103.6 61 86.9
CARHR240460 Cardamine hirsuta HOM05D003491 ORTHO05D004293 6.6e-21 103.6 65 80.0
MELO3C003677.2 Cucumis melo HOM05D003491 ORTHO05D004293 6.6e-21 103.6 60 86.7
CANSAT54G2758 Cannabis sativa HOM05D003491 ORTHO05D004293 8.6e-21 103.2 65 80.0
CiPaw.08G014200 Carya illinoinensis HOM05D003491 ORTHO05D004293 8.6e-21 103.2 65 81.5
SGA_v2.0_scaffold37G14799 Striga asiatica HOM05D003491 ORTHO05D004293 8.6e-21 103.2 65 81.5
AL7G19280 Arabidopsis lyrata HOM05D003491 ORTHO05D004293 1.1e-20 102.8 64 81.2
AT4G32530 Arabidopsis thaliana HOM05D003491 ORTHO05D004293 1.1e-20 102.8 64 81.2
Carub.0007s0805 Capsella rubella HOM05D003491 ORTHO05D004293 1.1e-20 102.8 64 81.2
Sp4g05100 Schrenkiella parvula HOM05D003491 ORTHO05D004293 1.1e-20 102.8 64 81.2
arahy.Tifrunner.gnm1.ann1.ED147J Arachis hypogaea HOM05D003491 ORTHO05D004293 1.5e-20 102.4 60 88.3
Lj5g0005859 Lotus japonicus HOM05D003491 ORTHO05D004293 1.5e-20 102.4 65 84.6
Mapoly0016s0012 Marchantia polymorpha HOM05D003491 ORTHO05D004293 2.5e-20 101.7 63 82.5
Carub.0004s0534 Capsella rubella HOM05D003491 ORTHO05D004293 3.3e-20 101.3 61 83.6
QL07p015653 Quercus lobata HOM05D003491 ORTHO05D004293 3.3e-20 101.3 59 84.7
Sp7g30300 Schrenkiella parvula HOM05D003491 ORTHO05D004293 3.3e-20 101.3 61 83.6
SMO117G0315 Selaginella moellendorffii HOM05D003491 ORTHO05D004293 3.3e-20 101.3 61 83.6
THA.LOC104803825 Tarenaya hassleriana HOM05D003491 ORTHO05D004293 3.3e-20 101.3 65 80.0
AL4G17080 Arabidopsis lyrata HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
AT2G25610 Arabidopsis thaliana HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
BcaB03g12749 Brassica carinata HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
BcaC01g01019 Brassica carinata HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
BcaC09g52042 Brassica carinata HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
BcaNung04516 Brassica carinata HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
A01p05870 Brassica napus HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
A08p18150 Brassica napus HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
C01p06490 Brassica napus HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
C03p87310 Brassica napus HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
BolC1t00643H Brassica oleracea HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
BolC3t21031H Brassica oleracea HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
BraA01t00554Z Brassica rapa HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
BraA08t33768Z Brassica rapa HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
Thhalv10026373m.g Eutrema salsugineum HOM05D003491 ORTHO05D004293 4.2e-20 100.9 61 83.6
Thhalv10000341m.g Eutrema salsugineum HOM05D003491 ORTHO05D004293 1.2e-19 99.4 64 78.1
Aa31LG10G10670 Aethionema arabicum HOM05D003491 ORTHO05D004293 1.6e-19 99.0 61 80.3
Pp3c4_7470 Physcomitrium patens HOM05D003491 ORTHO05D004293 1.0e-18 96.3 59 79.7
SEGI_03101 Sequoiadendron giganteum HOM05D003491 ORTHO05D004293 1.4e-18 95.9 61 78.7
Pp3c12_23580 Physcomitrium patens HOM05D003491 ORTHO05D004293 1.8e-18 95.5 59 79.7
Pp3c8_3370 Physcomitrium patens HOM05D003491 ORTHO05D004293 1.8e-18 95.5 59 79.7
Pp3c3_36670 Physcomitrium patens HOM05D003491 ORTHO05D004293 2.3e-18 95.1 59 78.0
Nn8g39341 Nelumbo nucifera HOM05D003491 ORTHO05D004293 3.0e-18 94.7 54 88.9
ClCG05G017160 Citrullus lanatus HOM05D003491 ORTHO05D004293 8.9e-18 93.2 56 85.7
Nn1g04228 Nelumbo nucifera HOM05D003491 ORTHO05D004293 2.6e-17 91.7 54 85.2
CBR_g48556 Chara braunii HOM05D003491 ORTHO05D004293 4.9e-16 87.4 54 81.5
CSS0000681 Camellia sinensis var. sinensis HOM05D003491 ORTHO05D004293 1.4e-15 85.9 64 73.4
Oeu022415.1 Olea europaea HOM05D003491 ORTHO05D004293 7.0e-15 83.6 64 71.9
AagrBONN_evm.TU.Sc2ySwM_344.4191 Anthoceros agrestis HOM05D003491 ORTHO05D004293 2.7e-14 81.6 60 66.7
PRCOL_00000662 Prasinoderma coloniale HOM05D003491 ORTHO05D004293 1.7e-13 79.0 51 74.5
Cre12.g529100 Chlamydomonas reinhardtii HOM05D003491 ORTHO05D004293 2.3e-13 78.6 51 70.6
CDE02G0717 Ceratophyllum demersum HOM05D003491 ORTHO05D004293 7.3e-12 73.6 41 92.7
MCO05G406 Micromonas commoda HOM05D003491 ORTHO05D004293 2.1e-11 72.0 51 72.5
GSVIVG01038372001 Vitis vinifera HOM05D003491 ORTHO05D004293 1.4e-10 69.3 63 65.1
arahy.Tifrunner.gnm1.ann1.Y9DYXP Arachis hypogaea HOM05D003491 ORTHO05D085445 6.4e-08 60.5 46 65.2
TWI32G0730 Tripterygium wilfordii HOM05D003491 ORTHO05D004293 1.4e-07 59.3 52 57.7
Haze_27614 Corylus avellana HOM05D003491 ORTHO05D004293 5.4e-07 57.4 54 51.9
HPP92_003644 Vanilla planifolia HOM05D003491 ORTHO05D004293 9.2e-07 56.6 51 56.9
CSS0040958 Camellia sinensis var. sinensis HOM05D003491 ORTHO05D004293 1.6e-06 55.8 54 61.1


User provided reference genes

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