Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002988 Daucus carota HOM05D007199 ORTHO05D007257 1.5e-133 479.6 253 100.0
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 1.1e-22 111.3 276 37.0
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 1.9e-19 100.5 273 34.1
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 5.6e-19 99.0 261 37.2
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 1.2e-18 97.8 235 37.9
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 2.1e-18 97.1 276 34.1
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 8.1e-18 95.1 232 33.6
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 8.1e-18 95.1 232 33.6
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 1.1e-17 94.7 231 35.1
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 1.8e-17 94.0 241 36.5
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 2.4e-17 93.6 251 34.3
CsaV3_6G008960 Cucumis sativus L. HOM05D007199 ORTHO05D007257 8.9e-17 91.7 215 34.4
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 1.2e-16 91.3 269 33.8
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 2.6e-16 90.1 251 31.9
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 2.6e-16 90.1 234 32.5
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 7.6e-16 88.6 282 33.3
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 7.6e-16 88.6 243 34.6
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 9.9e-16 88.2 234 32.1
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 1.7e-15 87.4 237 36.7
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 2.9e-15 86.7 243 33.7
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 2.9e-15 86.7 258 32.6
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 3.8e-15 86.3 270 34.8
Lalb_Chr15g0076391 Lupinus albus HOM05D007199 ORTHO05D007257 6.4e-15 85.5 226 34.5
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 8.4e-15 85.1 241 33.6
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 8.4e-15 85.1 241 33.6
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 8.4e-15 85.1 241 33.6
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 1.1e-14 84.7 262 33.2
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 1.9e-14 84.0 225 34.7
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 1.9e-14 84.0 244 35.2
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 1.9e-14 84.0 274 32.5
Rhsim01G0176600 Rhododendron simsii HOM05D007199 ORTHO05D007257 4.1e-14 82.8 218 34.9
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 4.1e-14 82.8 245 31.8
Aa31LG1G28040 Aethionema arabicum HOM05D007199 ORTHO05D007257 1.6e-13 80.9 265 31.3
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 2.1e-13 80.5 241 32.8
Atru.chr5.734 Acer truncatum HOM05D007199 ORTHO05D007257 3.5e-13 79.7 240 32.5
CARHR141980 Cardamine hirsuta HOM05D012720 ORTHO05D007257 4.6e-13 79.3 270 30.7
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 4.6e-13 79.3 293 30.7
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 4.6e-13 79.3 236 32.2
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 6.0e-13 79.0 274 32.1
Carub.0004s2935 Capsella rubella HOM05D012720 ORTHO05D007257 6.0e-13 79.0 264 31.8
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 7.8e-13 78.6 227 35.2
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 1.0e-12 78.2 221 31.2
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 1.0e-12 78.2 234 32.1
Actinidia28100 Actinidia chinensis HOM05D007199 ORTHO05D007257 2.3e-12 77.0 260 35.0
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 2.3e-12 77.0 237 30.8
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 5.1e-12 75.9 278 30.6
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 5.1e-12 75.9 242 32.6
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 6.6e-12 75.5 222 33.3
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 8.7e-12 75.1 273 33.0
ECA236G3069 Erigeron canadensis HOM05D007199 ORTHO05D007257 8.7e-12 75.1 232 32.3
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 8.7e-12 75.1 267 28.8
HanXRQChr04g0120361 Helianthus annuus HOM05D007199 ORTHO05D007257 1.1e-11 74.7 230 31.3
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 1.5e-11 74.3 242 33.1
AT2G46640 Arabidopsis thaliana HOM05D012720 ORTHO05D007257 1.9e-11 73.9 269 28.6
MSTRG.17369 Avicennia marina HOM05D007199 ORTHO05D007257 1.9e-11 73.9 256 29.7
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 1.9e-11 73.9 245 31.8
Sopen01g040020 Solanum pennellii HOM05D007199 ORTHO05D007257 2.5e-11 73.6 231 28.1
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 3.3e-11 73.2 242 30.6
BcaC02g12658 Brassica carinata HOM05D012720 ORTHO05D007257 4.3e-11 72.8 282 29.4
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 7.3e-11 72.0 239 33.1
Peaxi162Scf00087g00199 Petunia axillaris HOM05D007199 ORTHO05D007257 1.2e-10 71.2 230 32.6
CSS0044672 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 1.6e-10 70.9 234 33.3
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 1.6e-10 70.9 234 32.1
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.6e-10 70.9 235 31.1
Lsat_1_v5_gn_4_32721 Lactuca sativa HOM05D007199 ORTHO05D007257 1.6e-10 70.9 234 30.3
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 1.6e-10 70.9 256 31.2
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 1.6e-10 70.9 233 30.9
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 2.8e-10 70.1 259 31.3
Sp4g28690 Schrenkiella parvula HOM05D012720 ORTHO05D007257 3.6e-10 69.7 279 27.2
A05p01150 Brassica napus HOM05D012720 ORTHO05D007257 4.7e-10 69.3 266 28.6
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 4.7e-10 69.3 228 32.9
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 4.7e-10 69.3 245 29.8
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 6.2e-10 68.9 232 30.6
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 6.2e-10 68.9 239 28.9
DCAR_006984 Daucus carota HOM05D007199 ORTHO05D007257 8.1e-10 68.6 240 30.4
Nitab4.5_0014168g0010 Nicotiana tabacum HOM05D007199 ORTHO05D007257 8.1e-10 68.6 243 32.5
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 1.4e-09 67.8 257 30.7
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 1.4e-09 67.8 232 31.9
Gohir.A11G099400 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.8e-09 67.4 234 29.9
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.8e-09 67.4 224 32.1
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 1.8e-09 67.4 223 32.3
BraA05t19115Z Brassica rapa HOM05D012720 ORTHO05D007257 2.4e-09 67.0 252 27.8
COL.COLO4_06259 Corchorus olitorius HOM05D007199 ORTHO05D007257 2.4e-09 67.0 131 42.7
Gohir.A12G114200 Gossypium hirsutum HOM05D007199 ORTHO05D007257 2.4e-09 67.0 241 31.5
BcaB01g03200 Brassica carinata HOM05D012720 ORTHO05D007257 4.0e-09 66.2 279 28.7
Oeu022158.1 Olea europaea HOM05D007199 ORTHO05D007257 4.0e-09 66.2 206 34.0
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 4.0e-09 66.2 233 31.3
AL4G46070 Arabidopsis lyrata HOM05D012720 ORTHO05D007257 5.2e-09 65.9 260 29.2
Lj9C602T4 Lonicera japonica HOM05D007199 ORTHO05D007257 9.0e-09 65.1 201 35.8
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 9.0e-09 65.1 234 29.1
Solyc01g096260.4 Solanum lycopersicum HOM05D007199 ORTHO05D007257 1.2e-08 64.7 234 27.4
vmacro12588 Vaccinium macrocarpon HOM05D007199 ORTHO05D007257 1.2e-08 64.7 217 32.7
BcaC02g07047 Brassica carinata HOM05D012720 ORTHO05D007257 2.6e-08 63.5 282 28.7
AUR62008640 Chenopodium quinoa HOM05D021513 ORTHO05D007257 2.6e-08 63.5 231 29.4
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 5.8e-08 62.4 248 30.2
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 5.8e-08 62.4 271 30.3
PGSC0003DMG400000126 Solanum tuberosum HOM05D007199 ORTHO05D007257 7.6e-08 62.0 223 29.6
ATR0620G133 Amborella trichopoda HOM05D007199 ORTHO05D007257 9.9e-08 61.6 214 29.9
Aqoxy5G04262 Aquilegia oxysepala HOM05D007199 ORTHO05D007257 1.7e-07 60.8 223 29.6
Actinidia25657 Actinidia chinensis HOM05D007199 ORTHO05D007257 2.2e-07 60.5 210 33.3
C04p01310 Brassica napus HOM05D012720 ORTHO05D007257 3.8e-07 59.7 262 29.0
BolC4t21784H Brassica oleracea HOM05D012720 ORTHO05D007257 3.8e-07 59.7 262 29.0
arahy.Tifrunner.gnm1.ann1.P1IKWH Arachis hypogaea HOM05D007199 ORTHO05D007257 4.9e-07 59.3 98 38.8
arahy.Tifrunner.gnm1.ann1.A7IBVM Arachis hypogaea HOM05D007199 ORTHO05D007257 1.4e-06 57.8 98 38.8
SalBow5G5634 Salvia bowleyana HOM05D007199 ORTHO05D007257 1.4e-06 57.8 207 32.4
Lsat_1_v5_gn_7_2960 Lactuca sativa HOM05D002069 ORTHO05D001421 4.2e-06 56.2 147 32.0
CDE11G0583 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 5.4e-06 55.8 255 27.8


User provided reference genes

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