Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002973 Daucus carota HOM05D005312 ORTHO05D006459 1.1e-246 856.3 450 100.0
Oeu039797.1 Olea europaea HOM05D005312 ORTHO05D006459 1.1e-163 580.5 410 70.2
Hma1.2p1_0868F.1_g230570 Hydrangea macrophylla HOM05D005312 ORTHO05D006459 1.9e-163 579.7 407 72.2
Dinv33289 Davidia involucrata HOM05D005312 ORTHO05D006459 1.2e-162 577.0 403 72.5
Peaxi162Scf00420g00087 Petunia axillaris HOM05D005312 ORTHO05D006459 2.1e-162 576.2 404 70.8
CSS0036880 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 1.2e-160 570.5 450 69.8
CAN.G473.156 Capsicum annuum HOM05D005312 ORTHO05D006459 7.1e-158 561.2 414 68.6
Actinidia37728 Actinidia chinensis HOM05D005312 ORTHO05D006459 4.6e-157 558.5 407 71.0
PGSC0003DMG400020194 Solanum tuberosum HOM05D005312 ORTHO05D006459 6.6e-156 554.7 414 68.4
Lj7A616T62 Lonicera japonica HOM05D005312 ORTHO05D006459 3.3e-155 552.4 408 69.4
Cc07_g01210 Coffea canephora HOM05D005312 ORTHO05D006459 2.1e-154 549.7 410 68.5
SalBow4G2016 Salvia bowleyana HOM05D005312 ORTHO05D006459 2.1e-154 549.7 408 69.4
Rhsim10G0001700 Rhododendron simsii HOM05D005312 ORTHO05D006459 6.2e-154 548.1 408 68.4
MSTRG.3045 Avicennia marina HOM05D005312 ORTHO05D006459 8.1e-154 547.7 403 69.0
Sopen02g039150 Solanum pennellii HOM05D005312 ORTHO05D006459 4.0e-153 545.4 414 67.6
Solyc02g094480.4 Solanum lycopersicum HOM05D000001 ORTHO05D000003 5.3e-153 545.0 413 67.6
TAR629G1483 Trochodendron aralioides HOM05D005312 ORTHO05D006459 4.9e-151 538.5 402 68.9
vmacro22240 Vaccinium macrocarpon HOM05D005312 ORTHO05D006459 6.4e-151 538.1 410 68.3
Migut.F00017 Erythranthe guttata HOM05D005312 ORTHO05D006459 8.4e-151 537.7 408 68.4
Thecc.04G046000 Theobroma cacao HOM05D005312 ORTHO05D006459 1.9e-150 536.6 406 67.0
COL.COLO4_13349 Corchorus olitorius HOM05D005312 ORTHO05D006459 1.7e-148 530.0 406 66.7
Prupe.3G312600 Prunus persica HOM05D005312 ORTHO05D006459 1.7e-148 530.0 407 66.8
Nn4g22171 Nelumbo nucifera HOM05D005312 ORTHO05D006459 8.7e-148 527.7 403 65.8
MD17G1007700 Malus domestica HOM05D005312 ORTHO05D006459 2.5e-147 526.2 405 65.7
QL02p069878 Quercus lobata HOM05D005312 ORTHO05D006459 5.6e-147 525.0 405 66.4
Duzib264G0870 Durio zibethinus HOM05D005312 ORTHO05D006459 7.3e-147 524.6 406 66.7
Ciclev10015374m.g Citrus clementina HOM05D005312 ORTHO05D006459 2.1e-146 523.1 404 66.1
CANSAT64G1152 Cannabis sativa HOM05D005312 ORTHO05D006459 2.8e-146 522.7 407 63.6
MD09G1004000 Malus domestica HOM05D005312 ORTHO05D006459 3.6e-146 522.3 405 65.4
TAR371G0255 Trochodendron aralioides HOM05D005312 ORTHO05D006459 1.4e-145 520.4 402 66.4
Duzib187G0698 Durio zibethinus HOM05D005312 ORTHO05D006459 1.8e-145 520.0 406 65.3
Atru.chr6.2642 Acer truncatum HOM05D005312 ORTHO05D006459 2.2e-143 513.1 404 66.1
Cfa007172 Carpinus fangiana HOM05D005312 ORTHO05D006459 2.2e-143 513.1 405 66.4
RcHm_v2.0_Chr2g0176401 Rosa chinensis HOM05D005312 ORTHO05D006459 1.1e-142 510.8 407 65.1
FAN14G0182 Fragaria x ananassa HOM05D005312 ORTHO05D006459 1.4e-142 510.4 408 64.7
Duzib147G0684 Durio zibethinus HOM05D005312 ORTHO05D006459 2.4e-142 509.6 406 65.0
FvH4_6g54210 Fragaria vesca HOM05D005312 ORTHO05D006459 7.1e-142 508.1 408 64.5
FAN09G1737 Fragaria x ananassa HOM05D005312 ORTHO05D006459 7.1e-142 508.1 408 64.5
Oeu003422.1 Olea europaea HOM05D005312 ORTHO05D006459 9.3e-142 507.7 411 65.7
Phvul.004G070300 Phaseolus vulgaris HOM05D005312 ORTHO05D006459 3.5e-141 505.8 406 65.5
Cpa.g.sc70.78 Carica papaya HOM05D005312 ORTHO05D006459 7.9e-141 504.6 409 65.0
SGA_v2.0_scaffold44G16946 Striga asiatica HOM05D005312 ORTHO05D006459 1.0e-140 504.2 407 63.9
CiPaw.03G003000 Carya illinoinensis HOM05D005312 ORTHO05D006459 1.3e-140 503.8 403 65.5
FAN05G1132 Fragaria x ananassa HOM05D005312 ORTHO05D006459 1.3e-140 503.8 408 63.7
Nitab4.5_0025697g0010 Nicotiana tabacum HOM05D005312 ORTHO05D006459 5.1e-140 501.9 376 67.8
FAN02G3987 Fragaria x ananassa HOM05D005312 ORTHO05D006459 2.5e-139 499.6 408 63.5
Gohir.D07G239300 Gossypium hirsutum HOM05D005312 ORTHO05D006459 2.5e-139 499.6 406 64.5
Gorai.001G275400 Gossypium raimondii HOM05D005312 ORTHO05D006459 2.5e-139 499.6 406 64.5
Gohir.A07G232100 Gossypium hirsutum HOM05D005312 ORTHO05D006459 5.6e-139 498.4 406 64.0
Glyma.16G146900 Glycine max HOM05D005312 ORTHO05D006459 9.6e-139 497.7 408 64.7
Sed0007531 Sechium edule HOM05D005312 ORTHO05D006459 1.6e-138 496.9 402 65.4
Glyma.02G066000 Glycine max HOM05D005312 ORTHO05D006459 2.1e-138 496.5 408 65.2
Aa31LG2G5770 Aethionema arabicum HOM05D005312 ORTHO05D006459 8.1e-138 494.6 403 63.5
ClCG05G012720 Citrullus lanatus HOM05D005312 ORTHO05D006459 1.1e-137 494.2 402 64.4
Manes.04G092300 Manihot esculenta HOM05D005312 ORTHO05D006459 4.0e-137 492.3 413 63.2
TWI32G0425 Tripterygium wilfordii HOM05D005312 ORTHO05D006459 2.0e-136 490.0 404 64.4
arahy.Tifrunner.gnm1.ann1.ZY683S Arachis hypogaea HOM05D005312 ORTHO05D006459 5.8e-136 488.4 415 61.4
EL10As7g23753 Beta vulgaris HOM05D005312 ORTHO05D006459 7.6e-136 488.0 424 61.8
CSS0020784 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 1.7e-135 486.9 445 63.6
Lj2g0017210 Lotus japonicus HOM05D005312 ORTHO05D006459 4.9e-135 485.3 406 63.8
MELO3C014806.2 Cucumis melo HOM05D005312 ORTHO05D006459 8.4e-135 484.6 405 62.2
Ah.02g128920 Amaranthus hybridus HOM05D005312 ORTHO05D006459 2.5e-134 483.0 416 60.6
Lalb_Chr02g0156821 Lupinus albus HOM05D005312 ORTHO05D006459 3.2e-134 482.6 411 65.0
Manes.11G077500 Manihot esculenta HOM05D005312 ORTHO05D006459 3.2e-134 482.6 411 62.5
Lalb_Chr06g0173771 Lupinus albus HOM05D005312 ORTHO05D006459 9.3e-134 481.1 407 64.1
TPR.G36663 Trifolium pratense HOM05D005312 ORTHO05D006459 1.6e-133 480.3 410 62.9
Psat1g097480 Pisum sativum HOM05D005312 ORTHO05D006459 1.3e-132 477.2 402 63.2
THA.LOC104805304 Tarenaya hassleriana HOM05D005312 ORTHO05D006459 2.3e-132 476.5 406 61.6
Lsat_1_v5_gn_2_94460 Lactuca sativa HOM05D005312 ORTHO05D006459 8.7e-132 474.6 408 61.5
Eucgr.G01940 Eucalyptus grandis HOM05D005312 ORTHO05D006459 1.9e-131 473.4 405 61.2
Sabra14G0109800 Salix brachista HOM05D005312 ORTHO05D006459 2.5e-131 473.0 409 61.6
arahy.Tifrunner.gnm1.ann1.JN3C7K Arachis hypogaea HOM05D005312 ORTHO05D006459 3.3e-131 472.6 417 59.5
Nitab4.5_0002172g0150 Nicotiana tabacum HOM05D005312 ORTHO05D006459 1.3e-130 470.7 400 62.5
Sp2g15910 Schrenkiella parvula HOM05D005312 ORTHO05D006459 1.6e-130 470.3 404 62.6
Carub.0005s0483 Capsella rubella HOM05D005312 ORTHO05D006459 2.1e-130 469.9 403 61.5
Sc03g0004830 Simmondsia chinensis HOM05D005312 ORTHO05D006459 2.8e-130 469.5 410 61.7
AT3G26780 Arabidopsis thaliana HOM05D005312 ORTHO05D006459 1.1e-129 467.6 403 62.3
Potri.014G145900 Populus trichocarpa HOM05D005312 ORTHO05D006459 1.1e-129 467.6 409 61.1
Potri.002G236600 Populus trichocarpa HOM05D005312 ORTHO05D006459 1.8e-129 466.8 407 60.4
AL5G15650 Arabidopsis lyrata HOM05D005312 ORTHO05D006459 2.4e-129 466.5 451 59.4
HanXRQChr14g0451381 Helianthus annuus HOM05D005312 ORTHO05D006459 2.4e-129 466.5 399 61.9
THA.LOC104823996 Tarenaya hassleriana HOM05D005312 ORTHO05D006459 3.1e-129 466.1 405 60.2
Aqoxy5G03173 Aquilegia oxysepala HOM05D005312 ORTHO05D006459 4.0e-129 465.7 454 60.6
Thhalv10004350m.g Eutrema salsugineum HOM05D005312 ORTHO05D006459 4.0e-129 465.7 403 62.5
Medtr6g033275 Medicago truncatula HOM05D005312 ORTHO05D006459 2.0e-128 463.4 405 62.2
Aa31LG1G1910 Aethionema arabicum HOM05D005312 ORTHO05D006459 6.5e-127 458.4 407 61.2
Sabra02G0180200 Salix brachista HOM05D005312 ORTHO05D006459 8.4e-127 458.0 407 59.5
BraA02t08484Z Brassica rapa HOM05D005312 ORTHO05D006459 3.2e-126 456.1 403 60.8
PSO017G1316 Papaver somniferum HOM05D005312 ORTHO05D006459 3.2e-126 456.1 455 58.5
PSO478G3188 Papaver somniferum HOM05D005312 ORTHO05D006459 3.2e-126 456.1 411 58.9
A02p34780 Brassica napus HOM05D005312 ORTHO05D006459 7.1e-126 454.9 403 60.8
BcaC03g17388 Brassica carinata HOM05D005312 ORTHO05D006459 1.0e-124 451.1 403 60.8
BolC2t11405H Brassica oleracea HOM05D005312 ORTHO05D006459 1.0e-124 451.1 403 60.8
AUR62041074 Chenopodium quinoa HOM05D005312 ORTHO05D006459 1.0e-124 451.1 414 58.5
CARHR013180 Cardamine hirsuta HOM05D005312 ORTHO05D006459 1.8e-124 450.3 402 59.2
AT1G12850 Arabidopsis thaliana HOM05D005312 ORTHO05D006459 5.1e-124 448.7 402 59.7
C02p53340 Brassica napus HOM05D005312 ORTHO05D006459 5.1e-124 448.7 403 60.3
PGR083G1093 Punica granatum HOM05D005312 ORTHO05D006459 8.7e-124 448.0 420 59.3
MBI07_g40342_MAGBIO Magnolia biondii HOM05D005312 ORTHO05D006459 7.4e-123 444.9 414 58.5
BcaB07g30210 Brassica carinata HOM05D005312 ORTHO05D006459 1.6e-122 443.7 410 60.0
AL1G24500 Arabidopsis lyrata HOM05D005312 ORTHO05D006459 2.8e-122 443.0 402 58.2
Sp1g11430 Schrenkiella parvula HOM05D005312 ORTHO05D006459 6.9e-121 438.3 404 58.9
Thhalv10007881m.g Eutrema salsugineum HOM05D005312 ORTHO05D006459 2.2e-119 433.3 411 58.2
CARHR147850 Cardamine hirsuta HOM05D005312 ORTHO05D006459 5.5e-118 428.7 402 58.2
Gohir.D10G081000 Gossypium hirsutum HOM05D005312 ORTHO05D006459 3.0e-116 422.9 406 55.4
Carub.0001s1260 Capsella rubella HOM05D005312 ORTHO05D006459 3.9e-116 422.5 402 58.0
Gorai.011G088100 Gossypium raimondii HOM05D005312 ORTHO05D006459 5.1e-116 422.2 406 55.2
Gohir.A10G070100 Gossypium hirsutum HOM05D005312 ORTHO05D006459 1.5e-115 420.6 406 55.4
C08p15720 Brassica napus HOM05D005312 ORTHO05D006459 3.1e-113 412.9 407 58.0
BolC8t49199H Brassica oleracea HOM05D005312 ORTHO05D006459 4.1e-113 412.5 407 58.0
BcaB03g13161 Brassica carinata HOM05D005312 ORTHO05D006459 4.5e-112 409.1 405 57.5
A08p32570 Brassica napus HOM05D005312 ORTHO05D006459 2.5e-110 403.3 405 57.5
BraA08t35181Z Brassica rapa HOM05D005312 ORTHO05D006459 4.7e-109 399.1 405 57.3
CDE06G1073 Ceratophyllum demersum HOM05D005312 ORTHO05D006459 1.0e-108 397.9 401 55.4
AUR62037835 Chenopodium quinoa HOM05D005312 ORTHO05D006459 2.6e-107 393.3 341 60.4
ATR0582G189 Amborella trichopoda HOM05D005312 ORTHO05D006459 1.7e-106 390.6 437 52.9
CDE02G3855 Ceratophyllum demersum HOM05D005312 ORTHO05D006459 1.7e-106 390.6 402 55.2
Zm00001eb170350 Zea mays HOM05D005312 ORTHO05D006459 3.5e-104 382.9 402 53.7
GSVIVG01033003001 Vitis vinifera HOM05D005312 ORTHO05D006459 4.7e-101 372.5 327 62.1
Os11g0522000 Oryza sativa ssp. japonica HOM05D005312 ORTHO05D006459 1.4e-100 370.9 403 52.1
SEGI_01379 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 1.2e-96 357.8 411 49.6
ECA238G3491 Erigeron canadensis HOM05D000001 ORTHO05D000003 1.6e-93 347.4 346 55.5
Ca_26608_v3 Cicer arietinum L. HOM05D005312 ORTHO05D006459 4.5e-88 329.3 424 47.2
VMungo0464G0174 Vigna mungo HOM05D005312 ORTHO05D006459 1.8e-73 280.8 246 61.4
unitig_37.g12041 Utricularia gibba HOM05D005312 ORTHO05D006459 1.9e-70 270.8 231 61.5
ECA246G2144 Erigeron canadensis HOM05D005312 ORTHO05D006459 3.3e-70 270.0 248 56.0
SEGI_20575 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 7.5e-67 258.8 304 47.7
Pp3c21_20660 Physcomitrium patens HOM05D005312 ORTHO05D006459 5.0e-63 246.1 411 39.2
CSS0007293 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 1.6e-61 241.1 195 73.3
Actinidia19557 Actinidia chinensis HOM05D005312 ORTHO05D006459 4.7e-61 239.6 178 68.5
VMungo0464G1790 Vigna mungo HOM05D005312 ORTHO05D006459 5.2e-60 236.1 151 76.8
unitig_37.g12040 Utricularia gibba HOM05D005312 ORTHO05D006459 8.3e-58 228.8 174 66.1
HPP92_008243 Vanilla planifolia HOM05D005312 ORTHO05D006459 2.1e-56 224.2 241 54.8
Nn3g16305 Nelumbo nucifera HOM05D005312 ORTHO05D006459 1.2e-53 214.9 210 57.6
Haze_14938 Corylus avellana HOM05D005312 ORTHO05D006459 8.1e-53 212.2 149 72.5
CBR_g2835 Chara braunii HOM05D005312 ORTHO05D006459 1.2e-40 171.8 373 33.8
AagrBONN_evm.TU.Sc2ySwM_344.1953 Anthoceros agrestis HOM05D005312 ORTHO05D006459 1.9e-38 164.5 328 35.1
SGA_v2.0_scaffold173G39196 Striga asiatica HOM05D005312 ORTHO05D006459 1.7e-31 141.4 115 65.2
CARHR120940 Cardamine hirsuta HOM05D005312 ORTHO05D006459 4.6e-16 90.1 70 62.9
SEGI_29311 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 1.3e-15 88.6 90 51.1
Actinidia19558 Actinidia chinensis HOM05D005312 ORTHO05D006459 6.1e-08 63.2 93 47.3
PRCOL_00002808 Prasinoderma coloniale HOM05D005312 ORTHO05D006459 1.3e-07 62.0 161 30.4
C05p10420 Brassica napus HOM05D005312 ORTHO05D006459 3.0e-07 60.8 36 63.9


User provided reference genes

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