Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002885 Daucus carota HOM05D006547 ORTHO05D008112 5.5e-51 204.1 112 100.0
DCAR_005744 Daucus carota HOM05D006547 ORTHO05D008112 1.3e-23 113.2 120 58.3
Atru.chr5.966 Acer truncatum HOM05D006547 ORTHO05D008112 2.7e-18 95.5 87 63.2
TAR362G1145 Trochodendron aralioides HOM05D006547 ORTHO05D008112 6.7e-17 90.9 103 55.3
CAN.G1280.37 Capsicum annuum HOM05D006547 ORTHO05D008112 7.5e-16 87.4 98 55.1
Thecc.02G266700 Theobroma cacao HOM05D006547 ORTHO05D008112 7.5e-16 87.4 78 62.8
vmacro02389 Vaccinium macrocarpon HOM05D006547 ORTHO05D008112 1.7e-15 86.3 112 50.9
DCAR_012331 Daucus carota HOM05D006547 ORTHO05D008112 2.2e-15 85.9 95 53.7
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 6.3e-15 84.3 80 66.2
Nitab4.5_0000363g0200 Nicotiana tabacum HOM05D006547 ORTHO05D008112 8.2e-15 84.0 88 62.5
Cpa.g.sc18.81 Carica papaya HOM05D006547 ORTHO05D008112 1.1e-14 83.6 101 55.4
Duzib251G0664 Durio zibethinus HOM05D006547 ORTHO05D008112 1.4e-14 83.2 59 71.2
TAR633G2779 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.4e-14 83.2 92 60.9
CSS0011798 Camellia sinensis var. sinensis HOM05D006547 ORTHO05D008112 4.1e-14 81.6 102 50.0
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 4.1e-14 81.6 79 63.3
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 7.0e-14 80.9 100 53.0
COL.COLO4_23526 Corchorus olitorius HOM05D006547 ORTHO05D008112 9.1e-14 80.5 99 52.5
PGSC0003DMG401007298 Solanum tuberosum HOM05D006547 ORTHO05D008112 9.1e-14 80.5 100 53.0
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 1.6e-13 79.7 104 55.8
DCAR_018278 Daucus carota HOM05D006547 ORTHO05D008112 2.7e-13 79.0 101 50.5
Nitab4.5_0007407g0060 Nicotiana tabacum HOM05D006547 ORTHO05D008112 3.5e-13 78.6 57 68.4
TWI36G0249 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 4.5e-13 78.2 91 59.3
TWI18G0834 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 1.0e-12 77.0 105 51.4
Duzib268G0572 Durio zibethinus HOM05D006547 ORTHO05D008112 1.3e-12 76.6 110 48.2
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.3e-12 76.6 104 51.9
Phvul.007G089100 Phaseolus vulgaris HOM05D006547 ORTHO05D008112 2.2e-12 75.9 84 56.0
Solyc06g009510.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 2.2e-12 75.9 78 53.8
AT2G47270 Arabidopsis thaliana HOM05D006547 ORTHO05D008112 2.9e-12 75.5 78 53.8
Carub.0004s3001 Capsella rubella HOM05D006547 ORTHO05D008112 2.9e-12 75.5 78 53.8
Peaxi162Scf00058g00236 Petunia axillaris HOM05D006547 ORTHO05D008112 2.9e-12 75.5 55 67.3
Sopen06g004170 Solanum pennellii HOM05D006547 ORTHO05D008112 2.9e-12 75.5 99 48.5
A05p00570 Brassica napus HOM05D006547 ORTHO05D008112 5.0e-12 74.7 78 52.6
Rhsim13G0003400 Rhododendron simsii HOM05D006547 ORTHO05D008112 5.0e-12 74.7 94 56.4
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 6.5e-12 74.3 119 47.9
Duzib248G0337 Durio zibethinus HOM05D006547 ORTHO05D008112 6.5e-12 74.3 93 52.7
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 6.5e-12 74.3 87 57.5
CiPaw.07G119400 Carya illinoinensis HOM05D006547 ORTHO05D008112 8.5e-12 73.9 90 53.3
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 8.5e-12 73.9 99 52.5
BcaB02g08786 Brassica carinata HOM05D006547 ORTHO05D008112 1.1e-11 73.6 78 51.3
C04p00620 Brassica napus HOM05D006547 ORTHO05D008112 1.5e-11 73.2 78 51.3
BraA05t19055Z Brassica rapa HOM05D006547 ORTHO05D008112 1.5e-11 73.2 78 51.3
BolC4t21695H Brassica oleracea HOM05D006547 ORTHO05D008112 1.9e-11 72.8 78 51.3
MD09G1285300 Malus domestica HOM05D006547 ORTHO05D008112 1.9e-11 72.8 62 58.1
Oeu008480.1 Olea europaea HOM05D006547 ORTHO05D008112 1.9e-11 72.8 125 44.8
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 1.9e-11 72.8 105 51.4
AL302U10010 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 2.5e-11 72.4 95 47.4
AL4G46840 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 2.5e-11 72.4 95 47.4
Haze_05072 Corylus avellana HOM05D006547 ORTHO05D008112 3.2e-11 72.0 79 55.7
Sp4g29240 Schrenkiella parvula HOM05D006547 ORTHO05D008112 3.2e-11 72.0 94 46.8
CARHR142670 Cardamine hirsuta HOM05D006547 ORTHO05D008112 4.2e-11 71.6 94 47.9
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 4.2e-11 71.6 92 46.7
BcaB01g03174 Brassica carinata HOM05D006547 ORTHO05D008112 5.5e-11 71.2 78 51.3
Glyma.10G217100 Glycine max HOM05D006547 ORTHO05D008112 5.5e-11 71.2 78 55.1
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 5.5e-11 71.2 78 57.7
BcaC01g05038 Brassica carinata HOM05D006547 ORTHO05D008112 7.2e-11 70.9 100 45.0
C03p30880 Brassica napus HOM05D006547 ORTHO05D008112 7.2e-11 70.9 100 45.0
BolC3t15440H Brassica oleracea HOM05D006547 ORTHO05D008112 7.2e-11 70.9 100 45.0
Thhalv10001736m.g Eutrema salsugineum HOM05D006547 ORTHO05D008112 9.4e-11 70.5 78 50.0
SalBow3G4324 Salvia bowleyana HOM05D006547 ORTHO05D008112 9.4e-11 70.5 74 56.8
Migut.D00065 Erythranthe guttata HOM05D006547 ORTHO05D008112 1.2e-10 70.1 75 57.3
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 1.2e-10 70.1 94 47.9
CAN.G293.16 Capsicum annuum HOM05D006547 ORTHO05D008112 1.6e-10 69.7 103 50.5
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 1.6e-10 69.7 94 50.0
TPR.G8830 Trifolium pratense HOM05D006547 ORTHO05D008112 1.6e-10 69.7 81 53.1
HanXRQChr15g0465071 Helianthus annuus HOM05D006547 ORTHO05D008112 2.1e-10 69.3 78 53.8
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 3.6e-10 68.6 107 43.9
RcHm_v2.0_Chr3g0487231 Rosa chinensis HOM05D006547 ORTHO05D008112 3.6e-10 68.6 60 60.0
Sopen01g031050 Solanum pennellii HOM05D006547 ORTHO05D008112 3.6e-10 68.6 64 59.4
PGSC0003DMG400009058 Solanum tuberosum HOM05D006547 ORTHO05D008112 3.6e-10 68.6 64 59.4
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea HOM05D006547 ORTHO05D008112 4.7e-10 68.2 120 45.0
CANSAT25G1528 Cannabis sativa HOM05D006547 ORTHO05D008112 4.7e-10 68.2 49 63.3
Cfa005764 Carpinus fangiana HOM05D006547 ORTHO05D008112 4.7e-10 68.2 106 46.2
Gohir.A12G145800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 6.1e-10 67.8 91 52.7
Oeu044737.1 Olea europaea HOM05D006547 ORTHO05D008112 6.1e-10 67.8 102 45.1
Gohir.D12G150400 Gossypium hirsutum HOM05D006547 ORTHO05D008112 8.0e-10 67.4 91 52.7
Gorai.008G161900 Gossypium raimondii HOM05D006547 ORTHO05D008112 8.0e-10 67.4 91 52.7
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 8.0e-10 67.4 90 52.2
Prupe.3G008700 Prunus persica HOM05D006547 ORTHO05D008112 8.0e-10 67.4 101 45.5
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 8.0e-10 67.4 114 44.7
SGA_v2.0_scaffold334G49085 Striga asiatica HOM05D006547 ORTHO05D008112 1.0e-09 67.0 80 53.8
Gohir.A01G157750 Gossypium hirsutum HOM05D006547 ORTHO05D008112 1.8e-09 66.2 112 44.6
Manes.05G013600 Manihot esculenta HOM05D006547 ORTHO05D008112 1.8e-09 66.2 98 48.0
Gohir.D01G152800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 2.3e-09 65.9 116 44.8
A04p34890 Brassica napus HOM05D006547 ORTHO05D008112 3.0e-09 65.5 79 49.4
BraSC79t46680Z Brassica rapa HOM05D006547 ORTHO05D008112 3.0e-09 65.5 79 49.4
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 3.0e-09 65.5 71 56.3
EL10As5g23562 Beta vulgaris HOM05D006547 ORTHO05D008112 4.0e-09 65.1 79 49.4
FAN19G2346 Fragaria x ananassa HOM05D006547 ORTHO05D008112 5.2e-09 64.7 104 44.2
Aa31LG1G28590 Aethionema arabicum HOM05D006547 ORTHO05D008112 6.8e-09 64.3 94 46.8
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 6.8e-09 64.3 88 52.3
FvH4_1g26990 Fragaria vesca HOM05D006547 ORTHO05D008112 6.8e-09 64.3 103 42.7
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 6.8e-09 64.3 85 48.2
SGA_v2.0_scaffold376G50290 Striga asiatica HOM05D006547 ORTHO05D008112 6.8e-09 64.3 55 56.4
MD17G1278000 Malus domestica HOM05D006547 ORTHO05D008112 8.8e-09 63.9 92 46.7
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 1.2e-08 63.5 74 50.0
MSTRG.21702 Avicennia marina HOM05D006547 ORTHO05D008112 1.5e-08 63.2 76 53.9
Nitab4.5_0000222g0070 Nicotiana tabacum HOM05D006547 ORTHO05D008112 1.5e-08 63.2 58 60.3
THA.LOC104817451 Tarenaya hassleriana HOM05D006547 ORTHO05D008112 1.5e-08 63.2 53 62.3
FAN26G3307 Fragaria x ananassa HOM05D006547 ORTHO05D008112 2.0e-08 62.8 90 43.3
Gorai.002G189200 Gossypium raimondii HOM05D006547 ORTHO05D008112 2.6e-08 62.4 114 43.0
BcaB06g29454 Brassica carinata HOM05D006547 ORTHO05D008112 4.4e-08 61.6 96 43.8
FAN28G2331 Fragaria x ananassa HOM05D006547 ORTHO05D008112 4.4e-08 61.6 103 40.8
HanXRQChr10g0285031 Helianthus annuus HOM05D006547 ORTHO05D008112 4.4e-08 61.6 59 50.8
Manes.01G229900 Manihot esculenta HOM05D006547 ORTHO05D008112 4.4e-08 61.6 97 43.3
Ciclev10006764m.g Citrus clementina HOM05D006547 ORTHO05D008112 5.7e-08 61.2 65 50.8
Lsat_1_v5_gn_9_4661 Lactuca sativa HOM05D006547 ORTHO05D008112 5.7e-08 61.2 71 53.5
PSO761G0312 Papaver somniferum HOM05D006547 ORTHO05D008112 7.5e-08 60.8 91 47.3
Actinidia25863 Actinidia chinensis HOM05D006547 ORTHO05D008112 9.8e-08 60.5 96 43.8
FAN23G3047 Fragaria x ananassa HOM05D006547 ORTHO05D008112 9.8e-08 60.5 103 41.7
PSO210G6541 Papaver somniferum HOM05D006547 ORTHO05D008112 9.8e-08 60.5 94 45.7
Solyc01g079270.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 9.8e-08 60.5 112 42.0
C04p72660 Brassica napus HOM05D006547 ORTHO05D008112 1.3e-07 60.1 86 48.8
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 1.7e-07 59.7 92 40.2
Nn3g21744 Nelumbo nucifera HOM05D006547 ORTHO05D008112 1.7e-07 59.7 121 41.3
ECA247G3592 Erigeron canadensis HOM05D006547 ORTHO05D008112 2.8e-07 58.9 89 46.1
Sc17g0000340 Simmondsia chinensis HOM05D006547 ORTHO05D008112 2.8e-07 58.9 91 44.0
CiPaw.08G087700 Carya illinoinensis HOM05D006547 ORTHO05D008112 4.8e-07 58.2 95 44.2
Gohir.A04G137350 Gossypium hirsutum HOM05D034510 ORTHO05D008112 6.3e-07 57.8 96 35.4
Sc05g0000320 Simmondsia chinensis HOM05D006547 ORTHO05D008112 4.1e-06 55.1 116 39.7
CsaV3_3G026610 Cucumis sativus L. HOM05D006547 ORTHO05D008112 5.4e-06 54.7 48 56.2
MELO3C012934.2 Cucumis melo HOM05D006547 ORTHO05D008112 7.0e-06 54.3 48 56.2


User provided reference genes

Program Settings