Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 0.0e+00 1252.7 635 100.0
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 6.9e-183 644.8 642 53.4
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 2.6e-174 616.3 602 54.7
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 9.9e-174 614.4 570 56.5
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 3.8e-173 612.5 586 54.6
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 1.3e-170 604.0 655 49.3
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 5.1e-170 602.1 569 56.2
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 5.6e-169 598.6 652 49.4
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 1.8e-167 593.6 643 50.9
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 3.1e-167 592.8 642 51.1
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 5.3e-167 592.0 682 48.2
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 8.4e-165 584.7 642 50.9
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 1.1e-164 584.3 654 50.2
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 1.4e-164 583.9 660 48.6
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 2.5e-164 583.2 642 50.3
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 2.5e-164 583.2 642 50.8
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 4.2e-164 582.4 655 47.8
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 5.1e-162 575.5 660 46.5
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 6.7e-162 575.1 645 48.8
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 6.7e-162 575.1 656 48.8
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 6.7e-162 575.1 650 48.9
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 8.7e-162 574.7 653 49.3
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 1.1e-161 574.3 643 49.1
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 6.3e-160 568.5 656 49.1
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 1.4e-159 567.4 656 48.8
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 5.3e-159 565.5 643 48.4
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 5.3e-159 565.5 657 47.9
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 6.9e-159 565.1 651 47.2
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 1.5e-158 563.9 658 47.6
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 5.9e-158 562.0 659 47.6
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 1.0e-157 561.2 651 47.3
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 1.3e-157 560.8 656 47.6
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 2.9e-157 559.7 676 45.9
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 6.5e-157 558.5 657 48.2
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 6.5e-157 558.5 639 47.6
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 3.2e-156 556.2 635 48.2
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 4.2e-156 555.8 651 46.9
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 3.0e-154 549.7 583 50.6
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 3.9e-154 549.3 657 46.0
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 6.7e-154 548.5 536 53.2
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 8.8e-154 548.1 655 45.6
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 4.3e-153 545.8 544 53.3
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 1.3e-152 544.3 652 48.9
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 2.8e-152 543.1 660 46.1
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 3.7e-152 542.7 656 47.1
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 6.3e-152 542.0 656 46.3
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 1.4e-151 540.8 535 52.7
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 1.8e-151 540.4 535 54.6
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 9.1e-151 538.1 654 46.2
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 1.5e-150 537.3 658 46.5
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 3.4e-150 536.2 653 45.5
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 2.2e-149 533.5 643 47.0
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 2.2e-149 533.5 654 45.7
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 5.5e-148 528.9 672 44.6
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 1.6e-147 527.3 650 45.5
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 5.1e-146 522.3 575 48.9
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 8.8e-146 521.5 629 46.6
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 3.7e-144 516.2 585 48.0
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 4.8e-144 515.8 536 52.2
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 6.3e-144 515.4 635 44.7
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 6.3e-144 515.4 657 43.5
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 1.1e-143 514.6 640 44.5
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 1.4e-143 514.2 655 44.1
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 3.1e-143 513.1 662 44.3
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 1.5e-142 510.8 656 44.7
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 3.4e-142 509.6 664 44.6
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 1.0e-141 508.1 636 44.0
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 1.0e-141 508.1 636 44.0
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 2.9e-141 506.5 664 43.7
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 6.5e-141 505.4 563 47.6
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 6.5e-141 505.4 657 45.8
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 1.9e-140 503.8 655 43.8
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 2.1e-139 500.4 564 47.5
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 4.7e-139 499.2 652 44.0
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 1.4e-138 497.7 552 47.6
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 3.0e-138 496.5 537 48.4
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 5.2e-138 495.7 660 44.7
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 8.8e-138 495.0 540 47.8
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 1.1e-137 494.6 527 48.8
MBI16_g31793_MAGBIO Magnolia biondii HOM05D005891 ORTHO05D007214 2.0e-137 493.8 474 54.0
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 8.2e-136 488.4 655 44.3
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 1.1e-135 488.0 649 43.5
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 2.6e-134 483.4 535 47.7
BcaC07g40040 Brassica carinata HOM05D005891 ORTHO05D007214 8.5e-133 478.4 523 48.8
Aa31LG10G12080 Aethionema arabicum HOM05D005891 ORTHO05D007214 1.1e-132 478.0 602 45.5
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 3.2e-132 476.5 528 47.7
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 3.2e-132 476.5 659 42.8
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 4.2e-132 476.1 539 48.6
AUR62026144 Chenopodium quinoa HOM05D005891 ORTHO05D007214 4.0e-130 469.5 596 46.8
AUR62030390 Chenopodium quinoa HOM05D005891 ORTHO05D007214 1.3e-128 464.5 603 45.8
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 2.1e-123 447.2 706 39.0
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 4.0e-122 443.0 711 38.4
Lj5A499T12 Lonicera japonica HOM05D005891 ORTHO05D007214 7.5e-121 438.7 434 55.1
Gohir.D09G195600 Gossypium hirsutum HOM05D005891 ORTHO05D007214 1.3e-120 438.0 484 50.2
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 5.0e-117 426.0 585 40.7
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 9.5e-116 421.8 623 40.8
vmacro21952 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 1.7e-112 411.0 446 50.2
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 1.8e-106 391.0 652 38.7
HPP92_010949 Vanilla planifolia HOM05D005891 ORTHO05D007214 4.4e-105 386.3 555 41.8
FAN02G2450 Fragaria x ananassa HOM05D005891 ORTHO05D007214 9.8e-105 385.2 434 50.5
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 5.2e-98 362.8 636 35.1
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 1.2e-97 361.7 371 50.9
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 5.6e-84 316.2 655 34.8
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 6.8e-82 309.3 664 32.4
MD07G1151600 Malus domestica HOM05D005891 ORTHO05D007214 9.9e-81 305.4 359 48.5
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 2.4e-79 300.8 373 45.8
Pp3c24_1230 Physcomitrium patens HOM05D005891 ORTHO05D007214 2.5e-68 264.2 570 33.5
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis HOM05D005891 ORTHO05D007214 1.8e-66 258.1 586 31.4
Prupe.5G000500 Prunus persica HOM05D005891 ORTHO05D007214 1.7e-64 251.5 229 59.4
Mapoly0019s0088 Marchantia polymorpha HOM05D005891 ORTHO05D007214 2.2e-64 251.1 479 35.3
SMO367G0314 Selaginella moellendorffii HOM05D005891 ORTHO05D007214 1.4e-55 221.9 534 31.1
FAN05G3805 Fragaria x ananassa HOM05D005891 ORTHO05D007214 2.9e-48 197.6 199 50.8
Ciclev10013765m.g Citrus clementina HOM05D005891 ORTHO05D007214 6.0e-46 189.9 193 51.3
Cpa.g.sc66.74 Carica papaya HOM05D005891 ORTHO05D007214 1.0e-40 172.6 148 58.8
CBR_g4216 Chara braunii HOM05D000019 ORTHO05D000048 2.2e-40 171.4 262 37.0
Lj5C499G2 Lonicera japonica HOM05D005891 ORTHO05D007214 8.8e-37 159.5 197 47.2
Os05g0290300 Oryza sativa ssp. japonica HOM05D005891 ORTHO05D007214 3.7e-35 154.1 211 43.1
MD07G1151500 Malus domestica HOM05D005891 ORTHO05D007214 2.4e-34 151.4 221 41.2
VMungo1383G2003 Vigna mungo HOM05D005891 ORTHO05D007214 9.1e-34 149.4 294 35.4
QL07p005099 Quercus lobata HOM05D005891 ORTHO05D007214 6.1e-30 136.7 97 67.0
Cfa022822 Carpinus fangiana HOM05D005891 ORTHO05D007214 2.0e-25 121.7 318 29.9
TWI74G1459 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 1.0e-16 92.8 156 33.3
CSS0027694 Camellia sinensis var. sinensis HOM05D005891 ORTHO05D007214 9.4e-15 86.3 85 52.9
C04p35350 Brassica napus HOM05D005891 ORTHO05D032421 1.4e-13 82.4 257 31.9
BolC4t25089H Brassica oleracea HOM05D005891 ORTHO05D032421 1.4e-13 82.4 257 31.9
FAN02G2483 Fragaria x ananassa HOM05D005891 ORTHO05D007214 9.7e-12 76.3 82 42.7
Actinidia39189 Actinidia chinensis HOM05D005891 ORTHO05D007214 6.3e-11 73.6 85 45.9
BcaC02g09903 Brassica carinata HOM05D005891 ORTHO05D032421 1.7e-08 65.5 92 42.4
Actinidia39187 Actinidia chinensis HOM05D005891 ORTHO05D007214 1.1e-07 62.8 72 43.1


User provided reference genes

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