Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002850 Daucus carota HOM05D003556 ORTHO05D003404 4.0e-97 358.2 196 100.0
DCAR_005787 Daucus carota HOM05D003556 ORTHO05D003404 1.5e-35 153.7 194 44.3
DCAR_018322 Daucus carota HOM05D000036 ORTHO05D001038 3.0e-20 102.8 158 37.3
Lj2A1197T77 Lonicera japonica HOM05D003556 ORTHO05D003404 3.9e-12 75.9 161 30.4
CSS0044540 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.5e-11 73.9 193 29.0
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 3.3e-11 72.8 182 27.5
Dinv19674 Davidia involucrata HOM05D003556 ORTHO05D003404 7.4e-11 71.6 204 30.9
PGR119G1148 Punica granatum HOM05D003556 ORTHO05D003404 8.2e-10 68.2 190 25.8
Dinv33067 Davidia involucrata HOM05D003556 ORTHO05D003404 4.1e-09 65.9 196 29.6
TAR216G0004 Trochodendron aralioides HOM05D003556 ORTHO05D003404 9.1e-09 64.7 180 27.2
Lalb_Chr04g0259851 Lupinus albus HOM05D003556 ORTHO05D003404 1.2e-08 64.3 183 28.4
BcaC08g44217 Brassica carinata HOM05D003556 ORTHO05D003404 2.6e-08 63.2 159 27.0
C06p16220 Brassica napus HOM05D003556 ORTHO05D003404 2.6e-08 63.2 159 27.0
BolC6t36819H Brassica oleracea HOM05D003556 ORTHO05D003404 2.6e-08 63.2 159 27.0
AUR62008689 Chenopodium quinoa HOM05D003556 ORTHO05D003404 4.5e-08 62.4 166 28.9
AUR62025555 Chenopodium quinoa HOM05D003556 ORTHO05D003404 7.7e-08 61.6 161 28.6
Thhalv10012280m.g Eutrema salsugineum HOM05D003556 ORTHO05D003404 7.7e-08 61.6 169 26.0
BcaB02g10800 Brassica carinata HOM05D003556 ORTHO05D003404 1.0e-07 61.2 159 25.8
BraA05t20629Z Brassica rapa HOM05D003556 ORTHO05D003404 1.0e-07 61.2 159 26.4
MD11G1307600 Malus domestica HOM05D003556 ORTHO05D003404 1.3e-07 60.8 202 26.2
EL10Ac7g18176 Beta vulgaris HOM05D003556 ORTHO05D003404 1.7e-07 60.5 160 29.4
Aa31LG10G420 Aethionema arabicum HOM05D003556 ORTHO05D003404 2.2e-07 60.1 170 24.1
COL.COLO4_23319 Corchorus olitorius HOM05D003556 ORTHO05D003404 2.2e-07 60.1 159 25.2
A05p17320 Brassica napus HOM05D003556 ORTHO05D003404 3.8e-07 59.3 159 25.8
Sp1g41350 Schrenkiella parvula HOM05D003556 ORTHO05D003404 3.8e-07 59.3 169 26.0
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 5.0e-07 58.9 168 27.4
Thecc.01G303600 Theobroma cacao HOM05D003556 ORTHO05D003404 5.0e-07 58.9 164 28.0
Phvul.001G208900 Phaseolus vulgaris HOM05D003556 ORTHO05D003404 6.5e-07 58.5 158 29.1
BolC3t21618H Brassica oleracea HOM05D003556 ORTHO05D003404 8.5e-07 58.2 159 25.8
Nn3g21538 Nelumbo nucifera HOM05D003556 ORTHO05D003404 1.1e-06 57.8 156 27.6
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 1.1e-06 57.8 192 28.6
Manes.08G115800 Manihot esculenta HOM05D001445 ORTHO05D003404 1.4e-06 57.4 160 25.6
PSO210G6958 Papaver somniferum HOM05D003556 ORTHO05D003404 1.4e-06 57.4 169 26.6
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 1.9e-06 57.0 181 25.4
Manes.08G115700 Manihot esculenta HOM05D001445 ORTHO05D003404 1.9e-06 57.0 160 25.6
Phvul.001G209000 Phaseolus vulgaris HOM05D003556 ORTHO05D003404 1.9e-06 57.0 157 29.3
VMungo1309G0611 Vigna mungo HOM05D003556 ORTHO05D003404 1.9e-06 57.0 182 28.0
Atru.chr5.1112 Acer truncatum HOM05D003556 ORTHO05D003404 2.5e-06 56.6 191 26.2
MD03G1290800 Malus domestica HOM05D003556 ORTHO05D003404 3.2e-06 56.2 199 26.6
Phvul.009G236000 Phaseolus vulgaris HOM05D003556 ORTHO05D003404 4.2e-06 55.8 181 26.5
Rhsim05G0137100 Rhododendron simsii HOM05D003556 ORTHO05D003404 4.2e-06 55.8 156 26.9
AL1G63880 Arabidopsis lyrata HOM05D003556 ORTHO05D003404 5.5e-06 55.5 167 22.8
BcaB07g33190 Brassica carinata HOM05D003556 ORTHO05D003404 5.5e-06 55.5 164 25.0
C03p93200 Brassica napus HOM05D003556 ORTHO05D003404 5.5e-06 55.5 159 25.2
Carub.0001s4433 Capsella rubella HOM05D003556 ORTHO05D003404 5.5e-06 55.5 167 24.0
Ciclev10023798m.g Citrus clementina HOM05D003556 ORTHO05D003404 5.5e-06 55.5 157 28.0
Duzib138G0838 Durio zibethinus HOM05D003556 ORTHO05D003404 5.5e-06 55.5 195 26.7
FAN15G3222 Fragaria x ananassa HOM05D003556 ORTHO05D003404 5.5e-06 55.5 196 27.6
Lalb_Chr02g0146451 Lupinus albus HOM05D003556 ORTHO05D003404 5.5e-06 55.5 152 27.0
FAN20G1394 Fragaria x ananassa HOM05D003556 ORTHO05D003404 7.2e-06 55.1 196 27.6
Sed0024461 Sechium edule HOM05D003556 ORTHO05D003404 7.2e-06 55.1 181 24.9
VMungo1383G2652 Vigna mungo HOM05D003556 ORTHO05D003404 7.2e-06 55.1 150 26.0
FvH4_2g25950 Fragaria vesca HOM05D003556 ORTHO05D003404 9.4e-06 54.7 196 27.0
MBI19_g44106_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 9.4e-06 54.7 156 26.3


User provided reference genes

Program Settings