Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 1.2e-180 636.3 308 100.0
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 9.9e-95 350.9 312 57.7
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 2.2e-94 349.7 321 55.5
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 8.4e-94 347.8 319 55.5
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 1.1e-93 347.4 321 53.9
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 1.1e-93 347.4 321 55.8
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 2.4e-93 346.3 322 54.7
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 4.2e-93 345.5 320 54.7
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 1.2e-92 344.0 320 54.4
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 7.9e-92 341.3 318 56.0
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 3.9e-91 339.0 323 54.8
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 6.7e-91 338.2 320 53.1
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 8.7e-91 337.8 320 54.1
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 1.1e-90 337.4 283 58.0
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.3e-90 335.9 308 55.2
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 5.6e-90 335.1 327 53.8
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 7.4e-90 334.7 321 54.2
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 7.4e-90 334.7 321 54.2
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 9.6e-90 334.3 309 53.7
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 1.3e-89 334.0 325 53.2
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 1.3e-89 334.0 309 56.6
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.6e-89 333.6 321 54.2
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 1.6e-89 333.6 363 49.3
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 3.7e-89 332.4 318 52.8
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 4.8e-89 332.0 305 56.7
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 6.2e-89 331.6 320 51.9
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.8e-88 330.1 334 52.1
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 4.0e-88 328.9 256 60.2
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 3.4e-87 325.9 356 48.9
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 4.5e-87 325.5 284 56.7
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 5.8e-87 325.1 314 52.9
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 7.6e-87 324.7 311 51.8
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 1.3e-86 323.9 262 62.2
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.7e-86 323.6 311 51.4
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 8.4e-86 321.2 327 52.6
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 9.3e-85 317.8 271 60.1
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.6e-84 317.0 276 56.5
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 3.5e-84 315.8 316 51.3
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 4.6e-84 315.5 278 57.2
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 4.6e-84 315.5 276 56.2
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 6.0e-84 315.1 296 55.4
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.0e-83 314.3 276 56.2
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 1.3e-83 313.9 306 52.9
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 3.0e-83 312.8 321 50.2
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 3.9e-83 312.4 237 60.8
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 5.1e-83 312.0 292 56.2
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 1.9e-82 310.1 286 53.1
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 2.5e-82 309.7 324 50.9
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 7.4e-82 308.1 313 48.2
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 2.2e-81 306.6 292 52.7
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 2.2e-81 306.6 278 54.0
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 2.2e-81 306.6 300 51.7
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 2.8e-81 306.2 232 60.3
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 2.8e-81 306.2 303 53.1
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 2.8e-81 306.2 256 55.1
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 4.1e-80 302.4 278 54.0
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 4.1e-80 302.4 305 52.1
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 6.9e-80 301.6 284 54.2
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 4.5e-79 298.9 256 57.8
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 5.9e-79 298.5 283 52.7
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.0e-78 297.7 300 51.0
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 2.2e-78 296.6 278 53.6
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 3.8e-78 295.8 282 53.9
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 8.5e-78 294.7 300 50.3
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.1e-77 294.3 300 51.0
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 1.4e-77 293.9 284 53.5
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 5.5e-77 292.0 265 53.6
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 7.2e-77 291.6 282 52.8
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 1.6e-76 290.4 296 51.7
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 1.0e-75 287.7 296 51.4
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 1.4e-75 287.3 308 48.7
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 1.4e-75 287.3 281 52.3
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 3.3e-74 282.7 272 52.9
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 4.3e-74 282.3 314 48.4
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 4.3e-74 282.3 325 47.7
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 5.7e-74 282.0 280 52.1
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 9.7e-74 281.2 280 52.1
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 2.2e-73 280.0 310 49.0
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 2.8e-73 279.6 326 47.9
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 3.1e-72 276.2 284 51.1
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 4.1e-72 275.8 299 46.8
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.2e-71 274.2 280 51.4
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 2.0e-71 273.5 340 44.4
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 2.6e-71 273.1 280 51.4
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 2.6e-71 273.1 307 47.6
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 7.7e-71 271.6 324 46.3
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 7.7e-71 271.6 324 46.3
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.7e-70 270.4 210 59.5
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 1.4e-69 267.3 263 52.1
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.9e-69 266.9 262 52.3
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 9.4e-69 264.6 265 51.3
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 2.7e-68 263.1 283 48.8
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 2.0e-66 256.9 268 51.5
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.7e-57 227.3 293 45.4
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 2.0e-55 220.3 296 41.9
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 1.5e-50 204.1 195 50.8
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 1.2e-47 194.5 139 68.3
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 8.3e-41 171.8 172 54.1
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 2.6e-34 150.2 295 34.9
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 1.3e-30 137.9 139 46.0
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 6.1e-28 129.0 131 50.4
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 2.3e-27 127.1 237 33.3
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 5.2e-27 125.9 147 46.9
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 5.8e-26 122.5 86 62.8
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 1.7e-25 120.9 86 61.6
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 9.2e-24 115.2 86 59.3
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 1.2e-23 114.8 259 32.0
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 1.8e-19 100.9 116 42.2
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 6.4e-17 92.4 141 36.9
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 5.6e-13 79.3 58 56.9
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 2.1e-12 77.4 67 61.2
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 3.6e-12 76.6 103 41.7
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 5.2e-11 72.8 55 56.4
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 1.7e-06 57.8 101 29.7


User provided reference genes

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