Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 1.9e-131 472.6 264 100.0
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 6.6e-63 245.0 259 57.9
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 8.6e-63 244.6 259 58.3
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 3.3e-62 242.7 256 59.4
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 9.5e-62 241.1 252 66.7
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 5.4e-57 225.3 266 59.8
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 5.4e-57 225.3 266 59.8
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 1.2e-56 224.2 266 56.0
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 1.2e-56 224.2 266 56.0
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 2.7e-56 223.0 257 59.9
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 3.5e-56 222.6 266 59.4
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 7.8e-56 221.5 256 56.2
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 5.1e-55 218.8 269 53.2
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.5e-54 217.2 267 58.4
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 1.9e-54 216.9 270 53.7
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 1.9e-54 216.9 268 53.7
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 3.3e-54 216.1 268 59.0
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 1.2e-53 214.2 264 54.9
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 2.1e-53 213.4 276 56.5
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 1.1e-52 211.1 269 56.5
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 1.1e-52 211.1 254 54.7
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 1.1e-52 211.1 257 55.6
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 1.4e-52 210.7 261 52.9
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 1.4e-52 210.7 270 54.8
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 3.1e-52 209.5 260 54.2
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 4.0e-52 209.1 256 54.3
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 5.2e-52 208.8 256 55.9
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 6.8e-52 208.4 254 55.1
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.6e-51 206.5 261 58.6
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 3.4e-51 206.1 261 58.2
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.4e-51 206.1 261 58.2
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.4e-51 206.1 260 53.8
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 3.4e-51 206.1 256 55.1
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 4.4e-51 205.7 260 53.5
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 4.4e-51 205.7 253 54.2
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 4.4e-51 205.7 254 59.4
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 7.6e-51 204.9 260 53.5
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.7e-50 203.8 261 58.2
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 3.7e-50 202.6 280 50.0
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 6.4e-50 201.8 254 51.2
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 8.4e-50 201.4 255 53.7
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.9e-49 200.3 255 53.3
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 3.2e-49 199.5 259 57.1
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 3.2e-49 199.5 256 57.0
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 3.2e-49 199.5 266 53.8
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 4.1e-49 199.1 253 52.2
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 4.6e-48 195.7 252 51.6
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 1.0e-47 194.5 250 49.6
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 1.7e-47 193.7 250 52.0
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 3.0e-47 193.0 249 53.8
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 1.9e-46 190.3 256 52.3
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 5.6e-46 188.7 257 52.9
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 1.2e-45 187.6 252 52.0
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 1.6e-45 187.2 254 50.8
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 8.1e-45 184.9 248 52.8
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 3.1e-44 183.0 242 50.0
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 3.1e-44 183.0 260 50.8
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 8.9e-44 181.4 250 50.0
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 2.6e-43 179.9 252 49.2
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 4.4e-43 179.1 249 50.6
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 1.3e-42 177.6 245 53.5
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 1.7e-42 177.2 268 53.0
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.7e-42 177.2 186 60.8
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 2.2e-42 176.8 287 47.7
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 6.4e-42 175.3 243 51.4
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 1.1e-41 174.5 256 51.2
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 2.4e-41 173.3 259 45.6
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 4.2e-41 172.6 260 51.9
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 4.2e-41 172.6 243 50.2
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 7.1e-41 171.8 245 49.0
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 7.1e-41 171.8 245 49.0
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 9.3e-41 171.4 237 50.6
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 2.1e-40 170.2 242 48.3
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 3.5e-40 169.5 244 48.8
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 1.7e-39 167.2 249 46.2
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 3.0e-39 166.4 241 47.7
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 3.0e-39 166.4 244 48.8
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 3.0e-39 166.4 261 47.9
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 3.9e-39 166.0 272 48.5
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 5.1e-39 165.6 157 61.1
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 8.7e-39 164.9 260 51.9
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 1.5e-38 164.1 287 44.3
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 1.9e-38 163.7 260 47.3
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 4.3e-38 162.5 251 49.0
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 7.3e-38 161.8 256 50.4
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 1.6e-37 160.6 156 67.9
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.6e-37 160.6 275 45.8
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 2.1e-37 160.2 282 45.4
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.1e-36 157.9 256 47.3
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 6.9e-36 155.2 255 49.0
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 9.0e-36 154.8 249 46.6
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 3.4e-35 152.9 253 47.4
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 9.9e-35 151.4 272 46.3
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 1.3e-34 151.0 249 47.0
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 4.9e-34 149.1 247 45.3
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 8.4e-34 148.3 246 45.5
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 1.1e-33 147.9 256 46.9
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 7.9e-32 141.7 250 44.8
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 1.3e-31 141.0 229 45.0
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 3.4e-27 126.3 255 42.4
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.1e-25 121.3 112 69.6
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 1.4e-25 120.9 253 39.9
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 1.2e-24 117.9 201 45.3
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 4.3e-22 109.4 295 35.3
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 1.8e-20 104.0 159 49.7
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 4.5e-19 99.4 254 37.8
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 4.9e-18 95.9 261 35.6
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 4.6e-16 89.4 105 48.6
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 8.7e-07 58.5 101 39.6
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 1.1e-06 58.2 252 33.7
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 1.9e-06 57.4 267 29.6
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 2.5e-06 57.0 157 36.3
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 3.3e-06 56.6 86 41.9
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 4.3e-06 56.2 244 32.8


User provided reference genes

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