Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 8.7e-238 826.6 431 100.0
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 9.4e-176 620.5 419 72.3
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 1.6e-175 619.8 412 73.3
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 4.0e-174 615.1 433 69.1
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 4.0e-174 615.1 421 74.1
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 5.2e-174 614.8 417 72.7
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 8.8e-174 614.0 419 72.1
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 1.2e-173 613.6 419 75.2
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 4.8e-172 608.2 417 71.9
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 3.1e-171 605.5 418 70.8
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 1.6e-170 603.2 406 72.4
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 3.5e-170 602.1 428 70.6
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 5.9e-170 601.3 416 72.6
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 7.7e-170 600.9 417 70.7
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 7.7e-170 600.9 419 70.6
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 2.9e-169 599.0 411 71.5
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 3.8e-169 598.6 427 70.5
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 1.1e-168 597.0 410 72.4
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 1.9e-168 596.3 421 71.5
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 5.5e-168 594.7 423 69.7
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 5.5e-168 594.7 428 69.2
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 9.4e-168 594.0 419 70.9
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 1.6e-167 593.2 411 71.0
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 3.6e-167 592.0 419 70.9
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 6.1e-167 591.3 418 69.4
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 8.0e-167 590.9 414 70.8
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 1.0e-166 590.5 404 73.5
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 2.3e-166 589.3 421 69.1
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 3.0e-166 589.0 430 67.0
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 5.2e-166 588.2 420 70.5
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 6.8e-166 587.8 427 68.1
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 1.2e-165 587.0 419 69.9
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 1.5e-165 586.6 412 70.6
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 2.6e-165 585.9 423 70.0
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 2.6e-165 585.9 422 70.1
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 3.4e-165 585.5 417 69.8
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 4.4e-165 585.1 443 67.3
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 7.5e-165 584.3 410 70.7
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 9.8e-165 583.9 419 69.0
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 1.3e-164 583.6 409 71.1
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 1.3e-164 583.6 419 68.5
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 2.2e-164 582.8 437 67.7
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 8.3e-164 580.9 418 68.9
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 8.3e-164 580.9 410 70.5
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 2.4e-163 579.3 428 68.7
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 2.4e-163 579.3 412 69.4
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 3.1e-163 578.9 417 67.9
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 5.4e-163 578.2 431 67.1
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 1.6e-162 576.6 410 69.3
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 2.0e-162 576.2 411 70.1
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 5.9e-162 574.7 418 68.7
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 1.7e-161 573.2 411 70.1
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 2.3e-161 572.8 418 68.9
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 1.9e-160 569.7 411 69.1
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 1.9e-160 569.7 431 66.8
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 2.5e-160 569.3 425 68.0
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 7.2e-160 567.8 415 68.9
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 9.5e-160 567.4 403 69.5
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 1.2e-159 567.0 422 67.3
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 2.1e-159 566.2 415 68.4
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 2.1e-159 566.2 417 71.0
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 6.1e-159 564.7 418 67.7
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 2.3e-158 562.8 417 70.3
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 6.8e-158 561.2 403 72.5
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 3.4e-157 558.9 409 68.9
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 5.7e-157 558.1 409 68.9
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 7.5e-157 557.8 419 68.5
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 4.9e-156 555.1 376 74.2
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 6.3e-156 554.7 420 69.5
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 8.3e-156 554.3 403 68.7
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 1.1e-155 553.9 429 65.3
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.4e-155 553.5 409 68.2
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 1.4e-155 553.5 422 66.6
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 1.8e-155 553.1 406 68.0
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 1.8e-155 553.1 439 65.4
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 2.4e-155 552.7 479 60.1
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 9.2e-155 550.8 410 68.3
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 2.7e-154 549.3 516 57.4
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 7.8e-154 547.7 411 67.6
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 7.3e-152 541.2 423 64.1
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 2.3e-150 536.2 388 67.5
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 3.4e-149 532.3 405 65.4
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 2.7e-146 522.7 418 65.3
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 2.7e-146 522.7 405 64.7
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 6.0e-146 521.5 416 63.9
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 6.0e-146 521.5 416 63.9
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 2.3e-142 509.6 389 65.0
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 2.6e-141 506.1 375 69.1
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 5.6e-136 488.4 348 71.0
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 9.5e-136 487.6 360 69.7
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 5.8e-133 478.4 347 70.9
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 1.7e-132 476.9 333 71.8
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 1.7e-132 476.9 415 58.6
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 2.9e-132 476.1 410 58.5
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 2.9e-124 449.5 416 58.9
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 1.1e-123 447.6 398 57.0
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 1.5e-120 437.2 400 56.0
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 3.3e-120 436.0 335 65.7
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 1.0e-113 414.5 411 55.5
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 1.1e-112 411.0 318 67.9
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 5.4e-107 392.1 303 63.7
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 2.4e-102 376.7 322 65.8
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 3.4e-101 372.9 396 52.3
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.3e-97 360.9 252 73.0
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 7.1e-91 338.6 340 57.1
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 3.1e-86 323.2 391 46.5
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.7e-79 300.8 203 74.9
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 2.8e-79 300.1 219 65.8
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 8.2e-79 298.5 201 77.1
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 1.5e-69 267.7 389 43.4
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 8.8e-65 251.9 414 38.4
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.3e-44 184.1 125 70.4
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 9.5e-43 178.7 120 70.8
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.4e-38 164.9 112 69.6
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.7e-36 157.9 109 69.7
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.5e-35 154.1 109 68.8
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.2e-34 151.8 109 67.9
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 3.1e-33 147.1 117 62.4
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.6e-32 144.1 103 72.8
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 2.3e-28 131.0 78 82.1
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 2.3e-28 131.0 78 82.1
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.5e-24 118.2 91 60.4
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 4.4e-24 116.7 68 79.4
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 7.5e-24 115.9 77 64.9
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 7.1e-22 109.4 68 76.5
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 1.4e-17 95.1 66 63.6
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 2.0e-16 91.3 108 51.9
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 1.4e-14 85.1 110 50.0
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 1.1e-11 75.5 40 82.5
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 3.3e-11 73.9 211 36.5
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 4.3e-11 73.6 43 69.8
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 2.8e-10 70.9 41 78.0
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 4.4e-08 63.5 42 73.8


User provided reference genes

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