Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002813 Daucus carota HOM05D003821 ORTHO05D004449 1.9e-51 205.7 113 100.0
Actinidia32231 Actinidia chinensis HOM05D003821 ORTHO05D004449 9.2e-22 107.1 82 73.2
QL10p053326 Quercus lobata HOM05D003821 ORTHO05D004449 2.0e-21 105.9 106 58.5
QL10p054532 Quercus lobata HOM05D003821 ORTHO05D004449 2.0e-21 105.9 106 58.5
FAN24G2279 Fragaria x ananassa HOM05D003821 ORTHO05D004449 7.8e-21 104.0 88 67.0
FAN15G2810 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.0e-20 103.6 87 66.7
Haze_04896 Corylus avellana HOM05D003821 ORTHO05D004449 6.6e-20 100.9 108 56.5
FAN27G2508 Fragaria x ananassa HOM05D003821 ORTHO05D004449 8.6e-20 100.5 88 64.8
FAN20G2567 Fragaria x ananassa HOM05D000897 ORTHO05D000716 1.5e-19 99.8 95 61.1
Haze_01204 Corylus avellana HOM05D003821 ORTHO05D004449 4.3e-19 98.2 104 55.8
Sed0001615 Sechium edule HOM05D003821 ORTHO05D004449 2.1e-18 95.9 103 56.3
TAR362G0968 Trochodendron aralioides HOM05D003821 ORTHO05D004449 4.7e-18 94.7 85 63.5
Cpa.g.sc9.208 Carica papaya HOM05D003821 ORTHO05D004449 1.8e-17 92.8 105 55.2
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 1.8e-17 92.8 87 60.9
ClCG09G006050 Citrullus lanatus HOM05D003821 ORTHO05D004449 1.8e-17 92.8 79 65.8
arahy.Tifrunner.gnm1.ann1.UD53LE Arachis hypogaea HOM05D003821 ORTHO05D004449 6.8e-17 90.9 84 67.9
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 1.2e-16 90.1 93 57.0
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 2.6e-16 89.0 89 60.7
Sc24g0003850 Simmondsia chinensis HOM05D000714 ORTHO05D000544 2.6e-16 89.0 83 63.9
AUR62033168 Chenopodium quinoa HOM05D003821 ORTHO05D004449 3.4e-16 88.6 83 60.2
AUR62008616 Chenopodium quinoa HOM05D003821 ORTHO05D004449 1.3e-15 86.7 83 59.0
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 1.3e-15 86.7 90 57.8
arahy.Tifrunner.gnm1.ann1.LH51N9 Arachis hypogaea HOM05D003821 ORTHO05D004449 2.2e-15 85.9 99 57.6
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 2.2e-15 85.9 90 56.7
TPR.G33980 Trifolium pratense HOM05D003821 ORTHO05D004449 8.3e-15 84.0 106 50.0
Medtr1g088760 Medicago truncatula HOM05D003821 ORTHO05D004449 1.1e-14 83.6 116 46.6
Hma1.2p1_0209F.1_g088610 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 1.9e-14 82.8 59 71.2
VMungo1309G1076 Vigna mungo HOM05D003821 ORTHO05D004449 2.4e-14 82.4 89 55.1
A03p49340 Brassica napus HOM05D003821 ORTHO05D004449 3.2e-14 82.0 86 57.0
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 3.2e-14 82.0 79 59.5
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 4.1e-14 81.6 86 55.8
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 5.4e-14 81.3 71 62.0
SGA_v2.0_scaffold91G27999 Striga asiatica HOM05D003821 ORTHO05D004449 7.0e-14 80.9 106 46.2
TPR.G9594 Trifolium pratense HOM05D003821 ORTHO05D004449 7.0e-14 80.9 115 47.0
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 1.2e-13 80.1 90 57.8
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 2.0e-13 79.3 82 57.3
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 2.7e-13 79.0 86 53.5
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 2.7e-13 79.0 88 55.7
CAN.G185.14 Capsicum annuum HOM05D003821 ORTHO05D004449 2.7e-13 79.0 78 57.7
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 2.7e-13 79.0 87 57.5
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 3.5e-13 78.6 79 57.0
Ah.04g153550 Amaranthus hybridus HOM05D003821 ORTHO05D004449 4.6e-13 78.2 82 61.0
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 4.6e-13 78.2 82 54.9
SGA_v2.0_scaffold147G36288 Striga asiatica HOM05D003821 ORTHO05D004449 4.6e-13 78.2 76 56.6
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 6.0e-13 77.8 89 51.7
FAN12G1096 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.0e-12 77.0 81 55.6
A01p21700 Brassica napus HOM05D000802 ORTHO05D013138 1.3e-12 76.6 62 67.7
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.3e-12 76.6 79 58.2
RcHm_v2.0_Chr6g0293541 Rosa chinensis HOM05D003821 ORTHO05D004449 1.7e-12 76.3 111 46.8
Peaxi162Scf00048g00209 Petunia axillaris HOM05D003821 ORTHO05D004449 2.3e-12 75.9 73 58.9
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 2.3e-12 75.9 79 57.0
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 3.0e-12 75.5 74 58.1
Gorai.004G142200 Gossypium raimondii HOM05D003821 ORTHO05D004449 3.9e-12 75.1 130 42.3
CsaV3_7G029090 Cucumis sativus L. HOM05D003821 ORTHO05D004449 6.6e-12 74.3 82 54.9
FAN07G0841 Fragaria x ananassa HOM05D003821 ORTHO05D004449 6.6e-12 74.3 89 48.3
COL.COLO4_13871 Corchorus olitorius HOM05D003821 ORTHO05D004449 8.6e-12 73.9 86 52.3
BcaC06g33446 Brassica carinata HOM05D003821 ORTHO05D004449 1.1e-11 73.6 82 53.7
A08p11990 Brassica napus HOM05D003821 ORTHO05D004449 1.9e-11 72.8 92 47.8
BcaC07g37933 Brassica carinata HOM05D003821 ORTHO05D004449 3.3e-11 72.0 77 55.8
Nitab4.5_0000570g0120 Nicotiana tabacum HOM05D003821 ORTHO05D004449 3.3e-11 72.0 79 55.7
BraA08t33190Z Brassica rapa HOM05D003821 ORTHO05D004449 4.3e-11 71.6 110 44.5
Nitab4.5_0000191g0110 Nicotiana tabacum HOM05D003821 ORTHO05D004449 5.6e-11 71.2 105 44.8
ATR0580G132 Amborella trichopoda HOM05D003821 ORTHO05D004449 1.2e-10 70.1 103 44.7
BcaNung00244 Brassica carinata HOM05D000802 ORTHO05D013138 1.2e-10 70.1 75 54.7
BraA01t02079Z Brassica rapa HOM05D000802 ORTHO05D013138 1.2e-10 70.1 85 51.8
SalBow2G1159 Salvia bowleyana HOM05D003821 ORTHO05D004449 1.2e-10 70.1 100 47.0
MELO3C032813.2 Cucumis melo HOM05D003821 ORTHO05D004449 1.6e-10 69.7 55 67.3
BcaC06g32965 Brassica carinata HOM05D003821 ORTHO05D004449 2.1e-10 69.3 75 53.3
Nn4g25849 Nelumbo nucifera HOM05D003821 ORTHO05D004449 2.1e-10 69.3 107 44.9
vmacro08148 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 2.1e-10 69.3 153 35.9
FAN17G0959 Fragaria x ananassa HOM05D003821 ORTHO05D004449 3.6e-10 68.6 77 53.2
SGA_v2.0_scaffold428G51522 Striga asiatica HOM05D003821 ORTHO05D004449 3.6e-10 68.6 71 53.5
Thecc.04G284600 Theobroma cacao HOM05D003821 ORTHO05D004449 4.7e-10 68.2 86 51.2
Atru.chr5.1182 Acer truncatum HOM05D003821 ORTHO05D004449 8.1e-10 67.4 90 51.1
BcaB04g18333 Brassica carinata HOM05D003821 ORTHO05D004449 8.1e-10 67.4 86 48.8
Sabra08G0153500 Salix brachista HOM05D003821 ORTHO05D004449 8.1e-10 67.4 126 36.5
PGSC0003DMG400022856 Solanum tuberosum HOM05D003821 ORTHO05D004449 1.8e-09 66.2 117 41.9
Nitab4.5_0004438g0100 Nicotiana tabacum HOM05D003821 ORTHO05D004449 3.1e-09 65.5 90 46.7
Os06g0274000 Oryza sativa ssp. japonica HOM05D003821 ORTHO05D004449 3.1e-09 65.5 85 51.8
DCAR_013986 Daucus carota HOM05D003821 ORTHO05D004449 4.0e-09 65.1 102 42.2
Gohir.D08G138600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 4.0e-09 65.1 90 48.9
EL10Ac7g17441 Beta vulgaris HOM05D003821 ORTHO05D004449 5.2e-09 64.7 124 38.7
vmacro15236 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 5.2e-09 64.7 109 44.0
CANSAT78G0465 Cannabis sativa HOM05D003821 ORTHO05D004449 6.8e-09 64.3 86 48.8
TWI79G0264 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 6.8e-09 64.3 77 49.4
BolC7t45268H Brassica oleracea HOM05D003821 ORTHO05D004449 1.2e-08 63.5 86 46.5
BraA03t14035Z Brassica rapa HOM05D003821 ORTHO05D004449 1.2e-08 63.5 85 47.1
Ciclev10023083m.g Citrus clementina HOM05D003821 ORTHO05D004449 1.2e-08 63.5 90 48.9
Ciclev10007067m.g Citrus clementina HOM05D003821 ORTHO05D004449 2.0e-08 62.8 134 36.6
THA.LOC104817510 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 2.6e-08 62.4 90 46.7
Rhsim04G0221500 Rhododendron simsii HOM05D003821 ORTHO05D004449 3.4e-08 62.0 51 62.7
Hund20554 Selenicereus undatus HOM05D003821 ORTHO05D004449 3.4e-08 62.0 108 37.0
Nitab4.5_0003546g0070 Nicotiana tabacum HOM05D003821 ORTHO05D004449 4.4e-08 61.6 98 41.8
TAR365G0642 Trochodendron aralioides HOM05D003821 ORTHO05D004449 4.4e-08 61.6 88 47.7
Prupe.8G258100 Prunus persica HOM05D003821 ORTHO05D004449 5.8e-08 61.2 90 46.7
Gorai.007G237400 Gossypium raimondii HOM05D003821 ORTHO05D004449 7.5e-08 60.8 85 51.8
Aa31LG10G6300 Aethionema arabicum HOM05D003821 ORTHO05D004449 9.9e-08 60.5 110 36.4
CAN.G484.32 Capsicum annuum HOM05D003821 ORTHO05D004449 9.9e-08 60.5 132 40.2
FvH4_2g25350 Fragaria vesca HOM05D003821 ORTHO05D004449 9.9e-08 60.5 90 46.7
Thecc.01G297100 Theobroma cacao HOM05D003821 ORTHO05D004449 9.9e-08 60.5 90 46.7
Glyma.03G213100 Glycine max HOM05D003821 ORTHO05D004449 1.7e-07 59.7 49 65.3
Atru.chr4.2835 Acer truncatum HOM05D003821 ORTHO05D004449 2.2e-07 59.3 127 37.0
CANSAT25G1361 Cannabis sativa HOM05D003821 ORTHO05D004449 2.2e-07 59.3 90 44.4
Lj5g0023739 Lotus japonicus HOM05D003821 ORTHO05D004449 3.7e-07 58.5 88 44.3
Gohir.A11G115200 Gossypium hirsutum HOM05D003821 ORTHO05D004449 4.9e-07 58.2 90 45.6
Gohir.D11G120200 Gossypium hirsutum HOM05D003821 ORTHO05D004449 4.9e-07 58.2 90 45.6
Potri.010G025000 Populus trichocarpa HOM05D003821 ORTHO05D004449 4.9e-07 58.2 89 44.9
COL.COLO4_23375 Corchorus olitorius HOM05D003821 ORTHO05D004449 8.3e-07 57.4 44 68.2
FvH4_4g18020 Fragaria vesca HOM05D003821 ORTHO05D004449 8.3e-07 57.4 88 44.3
Gorai.007G128900 Gossypium raimondii HOM05D003821 ORTHO05D004449 8.3e-07 57.4 90 45.6
Medtr7g108610 Medicago truncatula HOM05D003821 ORTHO05D004449 8.3e-07 57.4 54 61.1
PSO832G3070 Papaver somniferum HOM05D003821 ORTHO05D004449 8.3e-07 57.4 88 40.9
Phvul.007G106500 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 1.9e-06 56.2 89 44.9
TWI14G0562 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.9e-06 56.2 90 43.3
Gohir.A08G117600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 2.4e-06 55.8 90 44.4
Gohir.D12G011000 Gossypium hirsutum HOM05D003821 ORTHO05D004449 2.4e-06 55.8 90 43.3
Gohir.D11G223400 Gossypium hirsutum HOM05D003821 ORTHO05D004449 3.2e-06 55.5 50 58.0
Gorai.008G011000 Gossypium raimondii HOM05D003821 ORTHO05D004449 3.2e-06 55.5 98 40.8
Potri.014G131701 Populus trichocarpa HOM05D003821 ORTHO05D004449 3.2e-06 55.5 88 45.5
C07p47410 Brassica napus HOM05D003821 ORTHO05D004449 4.1e-06 55.1 115 37.4
Glyma.10G019600 Glycine max HOM05D003821 ORTHO05D004449 4.1e-06 55.1 89 43.8
Aqoxy1G02453 Aquilegia oxysepala HOM05D036700 ORTHO05D004449 5.4e-06 54.7 83 44.6
Gohir.A12G010600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 5.4e-06 54.7 90 43.3
PSO210G2740 Papaver somniferum HOM05D003821 ORTHO05D004449 5.4e-06 54.7 88 39.8
HPP92_015490 Vanilla planifolia HOM05D003821 ORTHO05D004449 5.4e-06 54.7 56 53.6
CSS0027872 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 7.1e-06 54.3 97 40.2
Glyma.02G154700 Glycine max HOM05D003821 ORTHO05D004449 7.1e-06 54.3 89 43.8
Aa31LG8G3720 Aethionema arabicum HOM05D003821 ORTHO05D004449 9.2e-06 53.9 66 48.5


User provided reference genes

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