Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002810 Daucus carota HOM05D009180 ORTHO05D011053 2.9e-38 161.4 79 100.0
Cfa005957 Carpinus fangiana HOM05D009180 ORTHO05D011053 1.2e-15 86.3 79 57.0
Haze_04885 Corylus avellana HOM05D009180 ORTHO05D011053 2.0e-15 85.5 79 55.7
Ciclev10023157m.g Citrus clementina HOM05D009180 ORTHO05D011053 2.2e-14 82.0 80 55.0
Potri.002G206700 Populus trichocarpa HOM05D009180 ORTHO05D011053 4.9e-14 80.9 81 54.3
QL12p027017 Quercus lobata HOM05D009180 ORTHO05D011053 1.1e-13 79.7 80 51.2
Hma1.2p1_0209F.1_g088670 Hydrangea macrophylla HOM05D009180 ORTHO05D011053 3.2e-13 78.2 79 49.4
Prupe.8G257300 Prunus persica HOM05D009180 ORTHO05D011053 4.2e-13 77.8 81 53.1
Migut.I00103 Erythranthe guttata HOM05D009180 ORTHO05D011053 1.0e-11 73.2 80 50.0
Atru.chr5.1201 Acer truncatum HOM05D009180 ORTHO05D011053 1.8e-11 72.4 80 48.8
Lsat_1_v5_gn_9_5760 Lactuca sativa HOM05D009180 ORTHO05D011053 3.9e-11 71.2 83 42.2
Thecc.01G296100 Theobroma cacao HOM05D009180 ORTHO05D011053 3.9e-11 71.2 81 54.3
Lsat_1_v5_gn_3_43501 Lactuca sativa HOM05D009180 ORTHO05D011053 5.1e-11 70.9 83 49.4
FAN15G1629 Fragaria x ananassa HOM05D009180 ORTHO05D011053 1.1e-10 69.7 80 50.0
Gohir.D08G084400 Gossypium hirsutum HOM05D009180 ORTHO05D011053 1.9e-10 68.9 87 50.6
Gorai.004G088900 Gossypium raimondii HOM05D009180 ORTHO05D011053 1.9e-10 68.9 87 50.6
CiPaw.07G105700 Carya illinoinensis HOM05D009180 ORTHO05D011053 3.3e-10 68.2 81 48.1
Medtr1g088795 Medicago truncatula HOM05D009180 ORTHO05D011053 1.3e-09 66.2 81 45.7
Gohir.A08G101016 Gossypium hirsutum HOM05D009180 ORTHO05D011053 1.6e-09 65.9 87 49.4
TPR.G34016 Trifolium pratense HOM05D009180 ORTHO05D011053 4.8e-09 64.3 80 46.2
Ah.07g200460 Amaranthus hybridus HOM05D032354 ORTHO05D011053 4.0e-08 61.2 83 39.8
Nn4g25871 Nelumbo nucifera HOM05D009180 ORTHO05D011053 9.0e-08 60.1 80 43.8
Manes.01G216500 Manihot esculenta HOM05D009180 ORTHO05D011053 2.0e-07 58.9 85 45.9
Manes.05G064500 Manihot esculenta HOM05D009180 ORTHO05D011053 2.6e-07 58.5 89 47.2
Glyma.19G209600 Glycine max HOM05D009180 ORTHO05D011053 5.8e-07 57.4 79 41.8
Glyma.03G212500 Glycine max HOM05D009180 ORTHO05D011053 2.2e-06 55.5 81 35.8
PGSC0003DMG400011411 Solanum tuberosum HOM05D009180 ORTHO05D396329 2.9e-06 55.1 80 43.8
Glyma.02G154500 Glycine max HOM05D009180 ORTHO05D011053 8.4e-06 53.5 80 42.5
Rhsim01G0283500 Rhododendron simsii HOM05D001290 ORTHO05D001180 8.4e-06 53.5 61 49.2


User provided reference genes

Program Settings