Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002706 Daucus carota HOM05D004643 ORTHO05D005535 1.4e-201 706.1 361 100.0
Dinv22507 Davidia involucrata HOM05D004643 ORTHO05D005535 6.0e-107 391.7 344 64.0
Hma1.2p1_0172F.1_g075970 Hydrangea macrophylla HOM05D004643 ORTHO05D005535 2.8e-96 356.3 339 60.5
CSS0031620 Camellia sinensis var. sinensis HOM05D004643 ORTHO05D005535 4.9e-93 345.5 341 59.8
Actinidia19959 Actinidia chinensis HOM05D004643 ORTHO05D005535 1.3e-90 337.4 343 57.1
Actinidia09108 Actinidia chinensis HOM05D004643 ORTHO05D005535 2.1e-88 330.1 348 57.5
Cc01_g19060 Coffea canephora HOM05D004643 ORTHO05D005535 1.1e-81 307.8 360 52.5
CAN.G380.10 Capsicum annuum HOM05D004643 ORTHO05D005535 8.1e-80 301.6 344 53.2
Nitab4.5_0000252g0230 Nicotiana tabacum HOM05D004643 ORTHO05D005535 1.5e-78 297.4 347 50.4
GSVIVG01003113001 Vitis vinifera HOM05D004643 ORTHO05D005535 4.5e-78 295.8 338 53.8
Nitab4.5_0000871g0020 Nicotiana tabacum HOM05D004643 ORTHO05D005535 1.7e-77 293.9 347 49.9
Migut.O00727 Erythranthe guttata HOM05D004643 ORTHO05D005535 9.3e-76 288.1 333 50.8
Peaxi162Scf00230g00029 Petunia axillaris HOM05D004643 ORTHO05D005535 9.3e-76 288.1 332 52.7
Lj2C1166G12 Lonicera japonica HOM05D004643 ORTHO05D005535 1.2e-75 287.7 344 52.9
Rhsim13G0028400 Rhododendron simsii HOM05D004643 ORTHO05D005535 1.6e-75 287.3 431 45.7
Thecc.01G272300 Theobroma cacao HOM05D004643 ORTHO05D005535 7.9e-75 285.0 333 52.0
PGSC0003DMG400019346 Solanum tuberosum HOM05D004643 ORTHO05D005535 3.0e-74 283.1 341 49.9
Solyc09g065630.3 Solanum lycopersicum HOM05D004643 ORTHO05D005535 3.9e-74 282.7 341 50.1
Sopen09g027380 Solanum pennellii HOM05D004643 ORTHO05D005535 3.9e-74 282.7 341 50.1
Migut.N02031 Erythranthe guttata HOM05D004643 ORTHO05D005535 1.1e-73 281.2 334 50.0
Nitab4.5_0001044g0010 Nicotiana tabacum HOM05D004643 ORTHO05D005535 3.3e-73 279.6 335 52.5
Potri.002G048500 Populus trichocarpa HOM05D004643 ORTHO05D005535 4.3e-73 279.3 349 51.0
Sabra05G0163800 Salix brachista HOM05D004643 ORTHO05D005535 1.3e-72 277.7 365 50.1
Duzib211G0433 Durio zibethinus HOM05D004643 ORTHO05D005535 2.8e-72 276.6 304 53.6
Nn6g34159 Nelumbo nucifera HOM05D004643 ORTHO05D005535 2.8e-72 276.6 346 48.6
Potri.005G214300 Populus trichocarpa HOM05D004643 ORTHO05D005535 6.2e-72 275.4 346 51.2
Gorai.004G077100 Gossypium raimondii HOM05D004643 ORTHO05D005535 8.1e-72 275.0 345 49.3
Ciclev10021137m.g Citrus clementina HOM05D004643 ORTHO05D005535 1.4e-71 274.2 343 48.4
Gorai.008G002400 Gossypium raimondii HOM05D004643 ORTHO05D005535 3.1e-71 273.1 348 50.6
Gohir.A12G002900 Gossypium hirsutum HOM05D004643 ORTHO05D005535 4.0e-71 272.7 346 50.3
Gohir.D12G002600 Gossypium hirsutum HOM05D004643 ORTHO05D005535 1.2e-70 271.2 346 50.3
MSTRG.21530 Avicennia marina HOM05D004643 ORTHO05D005535 1.5e-70 270.8 342 48.8
HanXRQChr01g0005571 Helianthus annuus HOM05D004643 ORTHO05D005535 7.6e-70 268.5 318 52.2
Atru.chr5.1514 Acer truncatum HOM05D004643 ORTHO05D005535 2.2e-69 266.9 343 49.3
Duzib138G1309 Durio zibethinus HOM05D004643 ORTHO05D005535 2.9e-69 266.5 351 47.3
Nitab4.5_0015056g0010 Nicotiana tabacum HOM05D004643 ORTHO05D005535 2.9e-69 266.5 345 49.3
Duzib133G1145 Durio zibethinus HOM05D004643 ORTHO05D005535 8.4e-69 265.0 270 54.4
Dinv32890 Davidia involucrata HOM05D004643 ORTHO05D005535 3.2e-68 263.1 222 64.9
SalBow4G2540 Salvia bowleyana HOM05D004643 ORTHO05D005535 9.3e-68 261.5 277 54.2
ECA248G3352 Erigeron canadensis HOM05D004643 ORTHO05D005535 2.3e-66 256.9 310 52.3
Lsat_1_v5_gn_5_185821 Lactuca sativa HOM05D004643 ORTHO05D005535 1.5e-65 254.2 316 51.3
Lsat_1_v5_gn_8_94021 Lactuca sativa HOM05D004643 ORTHO05D005535 1.3e-64 251.1 299 53.8
TAR636G3033 Trochodendron aralioides HOM05D004643 ORTHO05D005535 2.8e-64 250.0 363 47.1
PGSC0003DMG401020059 Solanum tuberosum HOM05D004643 ORTHO05D005535 6.2e-64 248.8 343 48.7
HanXRQChr11g0338851 Helianthus annuus HOM05D004643 ORTHO05D005535 2.4e-63 246.9 327 51.7
Gohir.A08G064300 Gossypium hirsutum HOM05D004643 ORTHO05D005535 6.9e-63 245.4 271 50.9
TAR362G0460 Trochodendron aralioides HOM05D004643 ORTHO05D005535 5.8e-62 242.3 334 46.7
Nn1g02445 Nelumbo nucifera HOM05D004643 ORTHO05D005535 1.0e-61 241.5 277 53.4
CAN.G771.7 Capsicum annuum HOM05D004643 ORTHO05D005535 5.5e-60 235.7 344 45.9
Prupe.1G020900 Prunus persica HOM05D004643 ORTHO05D005535 5.5e-60 235.7 349 44.1
Solyc06g084120.4 Solanum lycopersicum HOM05D004643 ORTHO05D005535 7.9e-59 231.9 343 47.5
CsaV3_2G013410 Cucumis sativus L. HOM05D004643 ORTHO05D005535 3.9e-58 229.6 306 46.1
Aqoxy5G00405 Aquilegia oxysepala HOM05D004643 ORTHO05D005535 1.5e-57 227.6 351 43.6
Manes.05G081400 Manihot esculenta HOM05D004643 ORTHO05D005535 1.5e-57 227.6 251 53.0
Haze_11230 Corylus avellana HOM05D004643 ORTHO05D005535 1.9e-57 227.3 335 43.3
CiPaw.02G121300 Carya illinoinensis HOM05D004643 ORTHO05D005535 5.7e-57 225.7 340 44.7
Sopen06g035500 Solanum pennellii HOM05D004643 ORTHO05D005535 7.4e-57 225.3 268 54.1
GSVIVG01018038001 Vitis vinifera HOM05D004643 ORTHO05D005535 8.2e-56 221.9 314 46.8
Sabra02G0039600 Salix brachista HOM05D004643 ORTHO05D005535 2.4e-55 220.3 348 44.0
CANSAT78G2233 Cannabis sativa HOM05D004643 ORTHO05D005535 3.1e-55 219.9 341 43.4
Sed0027490 Sechium edule HOM05D004643 ORTHO05D005535 9.0e-55 218.4 310 45.5
SGA_v2.0_scaffold138G35301 Striga asiatica HOM05D004643 ORTHO05D005535 9.0e-55 218.4 304 47.0
ClCG06G006490 Citrullus lanatus HOM05D004643 ORTHO05D005535 2.6e-54 216.9 339 43.4
MSTRG.18264 Avicennia marina HOM05D004643 ORTHO05D005535 7.6e-54 215.3 250 50.8
Thecc.04G238200 Theobroma cacao HOM05D004643 ORTHO05D005535 1.0e-53 214.9 338 41.4
MBI11_g22675_MAGBIO Magnolia biondii HOM05D004643 ORTHO05D005535 8.5e-53 211.8 363 42.7
Manes.15G032500 Manihot esculenta HOM05D004643 ORTHO05D005535 8.5e-53 211.8 336 43.8
QL06p001136 Quercus lobata HOM05D004643 ORTHO05D005535 1.4e-52 211.1 355 43.4
AUR62024080 Chenopodium quinoa HOM05D004643 ORTHO05D005535 1.9e-52 210.7 353 41.9
RcHm_v2.0_Chr4g0387691 Rosa chinensis HOM05D004643 ORTHO05D005535 5.5e-52 209.1 308 45.5
AUR62034685 Chenopodium quinoa HOM05D004643 ORTHO05D005535 1.2e-51 208.0 358 43.0
PSO170G0554 Papaver somniferum HOM05D004643 ORTHO05D005535 4.6e-51 206.1 311 46.0
unitig_0.g136 Utricularia gibba HOM05D004643 ORTHO05D005535 6.1e-51 205.7 328 44.8
Cpa.g.sc44.119 Carica papaya HOM05D004643 ORTHO05D005535 1.0e-50 204.9 314 43.6
PSO210G1486 Papaver somniferum HOM05D004643 ORTHO05D005535 1.8e-50 204.1 311 46.0
Phvul.007G061400 Phaseolus vulgaris HOM05D004643 ORTHO05D005535 1.8e-50 204.1 335 43.6
FAN12G4007 Fragaria x ananassa HOM05D004643 ORTHO05D005535 5.1e-50 202.6 313 43.8
VMungo0720G0668 Vigna mungo HOM05D004643 ORTHO05D005535 5.1e-50 202.6 339 42.8
SGA_v2.0_scaffold1G00527 Striga asiatica HOM05D004643 ORTHO05D005535 1.1e-49 201.4 265 48.3
Ciclev10005357m.g Citrus clementina HOM05D004643 ORTHO05D005535 1.5e-49 201.1 343 40.5
Glyma.10G244400 Glycine max HOM05D004643 ORTHO05D005535 1.5e-49 201.1 332 43.7
FvH4_4g01120 Fragaria vesca HOM05D004643 ORTHO05D005535 1.9e-49 200.7 313 43.5
Duzib151G1159 Durio zibethinus HOM05D004643 ORTHO05D005535 9.7e-49 198.4 337 41.5
MD13G1199500 Malus domestica HOM05D004643 ORTHO05D005535 9.7e-49 198.4 319 43.3
Medtr1g102900 Medicago truncatula HOM05D004643 ORTHO05D005535 3.7e-48 196.4 338 42.0
Sed0024780 Sechium edule HOM05D004643 ORTHO05D005535 3.7e-48 196.4 260 47.7
Lj5g0008364 Lotus japonicus HOM05D004643 ORTHO05D005535 6.3e-48 195.7 337 41.5
PGR004G2239 Punica granatum HOM05D004643 ORTHO05D005535 8.2e-48 195.3 315 40.6
Glyma.20G150000 Glycine max HOM05D004643 ORTHO05D005535 1.8e-47 194.1 333 42.3
FAN22G0811 Fragaria x ananassa HOM05D002305 ORTHO05D002528 6.9e-47 192.2 266 47.0
MD16G1199200 Malus domestica HOM05D004643 ORTHO05D005535 2.0e-46 190.7 305 43.9
Ca_10855_v3 Cicer arietinum L. HOM05D004643 ORTHO05D005535 1.7e-45 187.6 339 41.9
Eucgr.H03414 Eucalyptus grandis HOM05D004643 ORTHO05D005535 1.7e-45 187.6 301 41.5
MELO3C014283.2 Cucumis melo HOM05D004643 ORTHO05D005535 2.9e-45 186.8 306 40.5
Psat6g204360 Pisum sativum HOM05D004643 ORTHO05D005535 2.9e-45 186.8 274 45.6
TPR.G26097 Trifolium pratense HOM05D004643 ORTHO05D005535 2.9e-45 186.8 335 40.3
FAN17G1992 Fragaria x ananassa HOM05D002305 ORTHO05D002528 6.5e-45 185.7 264 47.0
Gorai.011G168900 Gossypium raimondii HOM05D004643 ORTHO05D005535 6.5e-45 185.7 351 38.7
BcaB04g18255 Brassica carinata HOM05D004643 ORTHO05D005535 1.1e-44 184.9 336 41.7
BolC8t48230H Brassica oleracea HOM05D004643 ORTHO05D005535 1.9e-44 184.1 327 39.8
Gohir.D10G151600 Gossypium hirsutum HOM05D004643 ORTHO05D005535 1.9e-44 184.1 350 38.9
A08p11380 Brassica napus HOM05D004643 ORTHO05D005535 3.2e-44 183.3 327 39.4
THA.LOC104803050 Tarenaya hassleriana HOM05D004643 ORTHO05D005535 7.2e-44 182.2 294 42.9
TAR365G0093 Trochodendron aralioides HOM05D001497 ORTHO05D001707 9.4e-44 181.8 238 44.5
BraA08t33131Z Brassica rapa HOM05D004643 ORTHO05D005535 1.6e-43 181.0 327 39.1
Gohir.A10G113842 Gossypium hirsutum HOM05D004643 ORTHO05D005535 2.1e-43 180.6 352 38.4
CARHR221190 Cardamine hirsuta HOM05D004643 ORTHO05D005535 4.6e-43 179.5 324 41.7
BcaNung00344 Brassica carinata HOM05D004643 ORTHO05D005535 6.1e-43 179.1 326 41.7
Sp7g12820 Schrenkiella parvula HOM05D004643 ORTHO05D005535 6.1e-43 179.1 339 41.6
Carub.0007s2745 Capsella rubella HOM05D004643 ORTHO05D005535 1.8e-42 177.6 338 38.8
BcaC07g37843 Brassica carinata HOM05D004643 ORTHO05D005535 8.8e-42 175.3 333 38.7
Thhalv10025735m.g Eutrema salsugineum HOM05D004643 ORTHO05D005535 8.8e-42 175.3 337 38.9
AL7G41265 Arabidopsis lyrata HOM05D004643 ORTHO05D005535 1.1e-41 174.9 323 38.4
BolC1t02783H Brassica oleracea HOM05D004643 ORTHO05D005535 1.1e-41 174.9 326 38.7
Manes.03G173500 Manihot esculenta HOM05D004643 ORTHO05D005535 2.0e-41 174.1 265 46.0
C01p28440 Brassica napus HOM05D004643 ORTHO05D005535 2.6e-41 173.7 330 39.4
BcaC09g50142 Brassica carinata HOM05D004643 ORTHO05D005535 3.3e-41 173.3 326 39.3
Lalb_Chr21g0304771 Lupinus albus HOM05D004643 ORTHO05D005535 4.4e-41 172.9 339 41.0
vmacro02609 Vaccinium macrocarpon HOM05D004643 ORTHO05D005535 4.4e-41 172.9 214 50.5
COL.COLO4_21561 Corchorus olitorius HOM05D004643 ORTHO05D005535 7.4e-41 172.2 308 39.6
A01p22960 Brassica napus HOM05D004643 ORTHO05D005535 1.7e-40 171.0 328 40.2
BraA01t02209Z Brassica rapa HOM05D004643 ORTHO05D005535 1.7e-40 171.0 328 39.6
TWI53G0950 Tripterygium wilfordii HOM05D004643 ORTHO05D005535 2.8e-40 170.2 350 37.1
Carub.0007s2747 Capsella rubella HOM05D004643 ORTHO05D005535 3.7e-40 169.9 294 41.8
Aa31LG9G2640 Aethionema arabicum HOM05D004643 ORTHO05D005535 4.1e-39 166.4 283 43.8
AT4G14720 Arabidopsis thaliana HOM05D004643 ORTHO05D005535 4.1e-39 166.4 319 41.1
EL10Ac3g06512 Beta vulgaris HOM05D004643 ORTHO05D005535 1.5e-38 164.5 218 49.1
Gohir.D08G072800 Gossypium hirsutum HOM05D004643 ORTHO05D005535 1.5e-38 164.5 345 38.0
Ah.00g000940 Amaranthus hybridus HOM05D004643 ORTHO05D005535 2.6e-38 163.7 303 40.9
Oeu047218.1 Olea europaea HOM05D004643 ORTHO05D005535 2.6e-38 163.7 222 44.6
Atru.chr4.2372 Acer truncatum HOM05D004643 ORTHO05D005535 5.9e-38 162.5 320 36.6
Atru.chr4.2396 Acer truncatum HOM05D004643 ORTHO05D005535 7.7e-38 162.2 320 36.6
CDE10G0665 Ceratophyllum demersum HOM05D004643 ORTHO05D005535 1.7e-37 161.0 279 41.2
HPP92_023542 Vanilla planifolia HOM05D004643 ORTHO05D005535 3.8e-37 159.8 349 39.5
THA.LOC104808573 Tarenaya hassleriana HOM05D004643 ORTHO05D005535 1.6e-35 154.5 299 38.8
Peaxi162Scf00608g00922 Petunia axillaris HOM05D004643 ORTHO05D005535 3.9e-34 149.8 219 46.1
CDE10G0709 Ceratophyllum demersum HOM05D004643 ORTHO05D005535 8.8e-34 148.7 290 40.3
AT4G14713 Arabidopsis thaliana HOM05D004643 ORTHO05D005535 1.1e-33 148.3 187 47.6
unitig_60.g25785 Utricularia gibba HOM05D004643 ORTHO05D005535 3.3e-33 146.7 302 39.1
TWI73G0832 Tripterygium wilfordii HOM05D004643 ORTHO05D005535 6.3e-32 142.5 219 42.5
AL7G41240 Arabidopsis lyrata HOM05D004643 ORTHO05D005535 1.6e-30 137.9 331 36.0
ATR0665G494 Amborella trichopoda HOM05D004643 ORTHO05D005535 3.5e-30 136.7 304 36.2
Oeu047217.1 Olea europaea HOM05D004643 ORTHO05D005535 1.3e-29 134.8 146 56.8
SEGI_27968 Sequoiadendron giganteum HOM05D004643 ORTHO05D005535 1.4e-26 124.8 261 37.5
SMO356G0236 Selaginella moellendorffii HOM05D004643 ORTHO05D005535 2.0e-25 120.9 203 40.4
Ah.11g047360 Amaranthus hybridus HOM05D004643 ORTHO05D005535 9.7e-25 118.6 114 58.8
Hund22704 Selenicereus undatus HOM05D004643 ORTHO05D005535 1.6e-22 111.3 72 75.0
SHI00517 Sapria himalayana HOM05D004643 ORTHO05D005535 4.5e-22 109.8 291 34.0
Sc13g0004740 Simmondsia chinensis HOM05D004643 ORTHO05D005535 7.7e-22 109.0 210 37.1
CARHR221170 Cardamine hirsuta HOM05D004643 ORTHO05D005535 8.5e-21 105.5 271 34.3
CiPaw.01G195600 Carya illinoinensis HOM05D004643 ORTHO05D005535 4.7e-19 99.8 208 34.6
SMO348G0038 Selaginella moellendorffii HOM05D004643 ORTHO05D005535 2.3e-18 97.4 191 36.6
SMO153G0002 Selaginella moellendorffii HOM05D004643 ORTHO05D005535 2.6e-17 94.0 198 35.4
COL.COLO4_09196 Corchorus olitorius HOM05D004643 ORTHO05D005535 5.7e-17 92.8 179 39.7
CSS0034684 Camellia sinensis var. sinensis HOM05D004643 ORTHO05D005535 1.3e-13 81.6 103 52.4
COL.COLO4_09197 Corchorus olitorius HOM05D004643 ORTHO05D005535 6.5e-13 79.3 106 49.1
CBR_g49108 Chara braunii HOM05D000004 ORTHO05D038404 3.2e-12 77.0 56 62.5
Lsat_1_v5_gn_5_11760 Lactuca sativa HOM05D004348 ORTHO05D006191 6.1e-11 72.8 93 45.2
Lsat_1_v5_gn_8_161541 Lactuca sativa HOM05D004643 ORTHO05D005535 6.1e-11 72.8 93 45.2
CBR_g25753 Chara braunii HOM05D003995 ORTHO05D004800 6.3e-08 62.8 85 40.0
SGA_v2.0_scaffold7G04179 Striga asiatica HOM05D002346 ORTHO05D002452 5.4e-07 59.7 144 36.1
Pp3c25_6300 Physcomitrium patens HOM05D002346 ORTHO05D002452 7.0e-07 59.3 253 28.5
Ah.16g109020 Amaranthus hybridus HOM05D004643 ORTHO05D059934 1.2e-06 58.5 54 61.1
ATR0006G052 Amborella trichopoda HOM05D001047 ORTHO05D000768 5.9e-06 56.2 128 32.0


User provided reference genes

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