Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002599 Daucus carota HOM05D004037 ORTHO05D004744 6.7e-193 677.2 341 100.0
Nn3g17600 Nelumbo nucifera HOM05D004037 ORTHO05D004744 5.4e-134 481.5 338 71.0
TAR636G3090 Trochodendron aralioides HOM05D004037 ORTHO05D004744 7.3e-131 471.1 346 68.5
Actinidia39245 Actinidia chinensis HOM05D004037 ORTHO05D004744 1.4e-129 466.8 337 69.1
GSVIVG01038260001 Vitis vinifera HOM05D004037 ORTHO05D004744 1.8e-129 466.5 352 68.5
HanXRQChr02g0032821 Helianthus annuus HOM05D004037 ORTHO05D004744 6.8e-129 464.5 345 68.1
Hma1.2p1_0150F.1_g066850 Hydrangea macrophylla HOM05D004037 ORTHO05D004744 8.9e-129 464.2 342 69.3
Lsat_1_v5_gn_3_17660 Lactuca sativa HOM05D004037 ORTHO05D004744 2.0e-128 463.0 344 66.3
ECA246G0926 Erigeron canadensis HOM05D004037 ORTHO05D004744 4.4e-128 461.8 343 67.3
Ah.06g182910 Amaranthus hybridus HOM05D004037 ORTHO05D004744 1.7e-127 459.9 345 66.4
AUR62016240 Chenopodium quinoa HOM05D004037 ORTHO05D004744 1.1e-126 457.2 348 66.7
Cc03_g11000 Coffea canephora HOM05D004037 ORTHO05D004744 1.1e-126 457.2 348 66.4
Nitab4.5_0000245g0260 Nicotiana tabacum HOM05D004037 ORTHO05D004744 1.4e-126 456.8 341 67.4
Glyma.16G028900 Glycine max HOM05D004037 ORTHO05D004744 2.4e-126 456.1 343 66.8
Actinidia14627 Actinidia chinensis HOM05D004037 ORTHO05D004744 3.2e-126 455.7 337 68.5
Lju470A2T32 Lonicera japonica HOM05D004037 ORTHO05D004744 4.1e-126 455.3 353 67.7
Ah.04g165670 Amaranthus hybridus HOM05D004037 ORTHO05D004744 1.2e-125 453.8 301 72.4
Aqoxy2G03110 Aquilegia oxysepala HOM05D004037 ORTHO05D004744 6.0e-125 451.4 280 77.1
EL10Ac2g02395 Beta vulgaris HOM05D004037 ORTHO05D004744 6.0e-125 451.4 349 67.0
Glyma.07G060300 Glycine max HOM05D004037 ORTHO05D004744 6.0e-125 451.4 343 66.2
Hund23277 Selenicereus undatus HOM05D004037 ORTHO05D004744 7.8e-125 451.1 306 72.5
MBI18_g24142_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 1.0e-124 450.7 287 75.3
Hund02101 Selenicereus undatus HOM05D004037 ORTHO05D004744 1.0e-124 450.7 341 66.3
Sc06g0007930 Simmondsia chinensis HOM05D004037 ORTHO05D004744 1.3e-124 450.3 341 66.9
Thecc.05G172500 Theobroma cacao HOM05D004037 ORTHO05D004744 1.7e-124 449.9 342 68.1
VMungo1383G1316 Vigna mungo HOM05D004037 ORTHO05D004744 1.7e-124 449.9 308 72.1
CiPaw.01G202600 Carya illinoinensis HOM05D004037 ORTHO05D004744 2.3e-124 449.5 307 71.3
AUR62032781 Chenopodium quinoa HOM05D004037 ORTHO05D004744 3.9e-124 448.7 346 65.6
PSO541G3258 Papaver somniferum HOM05D004037 ORTHO05D004744 5.1e-124 448.4 342 66.1
TWI34G0723 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 5.1e-124 448.4 300 74.7
Phvul.001G003100 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 1.5e-123 446.8 341 66.9
Thecc.01G117800 Theobroma cacao HOM05D004037 ORTHO05D004744 1.9e-123 446.4 341 66.9
TWI63G1426 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 1.9e-123 446.4 308 72.1
Lalb_Chr10g0100171 Lupinus albus HOM05D004037 ORTHO05D004744 2.5e-123 446.0 308 71.4
PGSC0003DMG400028592 Solanum tuberosum HOM05D004037 ORTHO05D004744 2.5e-123 446.0 341 66.3
Duzib093G0613 Durio zibethinus HOM05D004037 ORTHO05D004744 3.3e-123 445.7 341 65.4
ClCG09G010780 Citrullus lanatus HOM05D004037 ORTHO05D004744 9.6e-123 444.1 309 71.5
QL10p065764 Quercus lobata HOM05D004037 ORTHO05D004744 9.6e-123 444.1 333 66.4
Solyc01g098380.4 Solanum lycopersicum HOM05D004037 ORTHO05D004744 9.6e-123 444.1 341 66.3
Manes.05G207900 Manihot esculenta HOM05D004037 ORTHO05D004744 1.2e-122 443.7 284 76.8
PGR042G3458 Punica granatum HOM05D004037 ORTHO05D004744 1.2e-122 443.7 315 70.2
QL10p064641 Quercus lobata HOM05D004037 ORTHO05D004744 1.2e-122 443.7 333 66.4
COL.COLO4_19183 Corchorus olitorius HOM05D004037 ORTHO05D004744 2.1e-122 443.0 308 71.8
PSO675G6334 Papaver somniferum HOM05D004037 ORTHO05D004744 2.1e-122 443.0 344 65.1
Phvul.010G108900 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 2.1e-122 443.0 341 67.2
Medtr8g028145 Medicago truncatula HOM05D004037 ORTHO05D004744 6.2e-122 441.4 342 66.1
CAN.G134.227 Capsicum annuum HOM05D004037 ORTHO05D004744 8.1e-122 441.0 340 66.8
Sed0007542 Sechium edule HOM05D004037 ORTHO05D004744 1.4e-121 440.3 326 68.4
TPR.G5068 Trifolium pratense HOM05D004037 ORTHO05D004744 2.4e-121 439.5 327 67.6
MSTRG.7308 Avicennia marina HOM05D004037 ORTHO05D004744 3.1e-121 439.1 354 65.3
Prupe.6G152500 Prunus persica HOM05D004037 ORTHO05D004744 6.8e-121 438.0 306 70.9
Gohir.A11G301700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 8.9e-121 437.6 302 71.9
MELO3C013171.2 Cucumis melo HOM05D004037 ORTHO05D004744 2.0e-120 436.4 299 71.9
Gorai.001G202100 Gossypium raimondii HOM05D004037 ORTHO05D004744 2.0e-120 436.4 300 71.7
MD15G1142500 Malus domestica HOM05D004037 ORTHO05D004744 2.0e-120 436.4 300 70.7
EL10Ac6g13735 Beta vulgaris HOM05D004037 ORTHO05D004744 3.4e-120 435.6 274 75.2
Gohir.A07G173900 Gossypium hirsutum HOM05D004037 ORTHO05D004744 3.4e-120 435.6 302 70.9
vmacro05805 Vaccinium macrocarpon HOM05D004037 ORTHO05D004744 3.4e-120 435.6 348 64.1
Gorai.007G347100 Gossypium raimondii HOM05D004037 ORTHO05D004744 4.4e-120 435.3 302 70.5
THA.LOC104804380 Tarenaya hassleriana HOM05D004037 ORTHO05D004744 4.4e-120 435.3 296 71.6
CDE02G2837 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 9.9e-120 434.1 284 73.6
Gohir.D07G181200 Gossypium hirsutum HOM05D004037 ORTHO05D004744 9.9e-120 434.1 300 71.0
Oeu016121.2 Olea europaea HOM05D004037 ORTHO05D004744 1.3e-119 433.7 288 74.3
Psat4g089800 Pisum sativum HOM05D004037 ORTHO05D004744 1.3e-119 433.7 337 65.9
CsaV3_7G021780 Cucumis sativus L. HOM05D004037 ORTHO05D004744 1.7e-119 433.3 299 71.2
arahy.Tifrunner.gnm1.ann1.FPGW6Q Arachis hypogaea HOM05D004037 ORTHO05D004744 2.2e-119 433.0 310 68.7
Migut.M01184 Erythranthe guttata HOM05D004037 ORTHO05D004744 4.9e-119 431.8 297 70.7
AUR62032340 Chenopodium quinoa HOM05D004037 ORTHO05D004744 6.4e-119 431.4 321 67.3
Ciclev10020914m.g Citrus clementina HOM05D004037 ORTHO05D004744 8.4e-119 431.0 300 71.3
PSO339G4618 Papaver somniferum HOM05D004037 ORTHO05D004744 8.4e-119 431.0 323 65.3
arahy.Tifrunner.gnm1.ann1.X3ZCQR Arachis hypogaea HOM05D004037 ORTHO05D004744 1.1e-118 430.6 310 68.4
Ca_23565_v3 Cicer arietinum L. HOM05D004037 ORTHO05D004744 1.1e-118 430.6 341 63.9
RcHm_v2.0_Chr2g0084421 Rosa chinensis HOM05D004037 ORTHO05D004744 1.1e-118 430.6 287 72.1
Peaxi162Scf00071g00719 Petunia axillaris HOM05D004037 ORTHO05D004744 1.4e-118 430.3 265 77.4
Aa31LG10G14130 Aethionema arabicum HOM05D004037 ORTHO05D004744 2.4e-118 429.5 331 65.3
CDE05G0441 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 5.4e-118 428.3 293 70.6
Duzib128G0968 Durio zibethinus HOM05D004037 ORTHO05D004744 5.4e-118 428.3 309 69.3
Lj3g0014190 Lotus japonicus HOM05D004037 ORTHO05D004744 5.4e-118 428.3 325 67.1
CANSAT01G0494 Cannabis sativa HOM05D004037 ORTHO05D004744 7.1e-118 427.9 274 76.6
Sed0020358 Sechium edule HOM05D004037 ORTHO05D004744 7.1e-118 427.9 299 71.2
Atru.chr12.1746 Acer truncatum HOM05D004037 ORTHO05D004744 1.2e-117 427.2 331 66.2
CARHR170220 Cardamine hirsuta HOM05D004037 ORTHO05D004744 1.6e-117 426.8 302 70.2
Thhalv10006083m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 1.6e-117 426.8 336 66.1
AUR62028616 Chenopodium quinoa HOM05D004037 ORTHO05D004744 2.1e-117 426.4 313 67.4
Migut.M00539 Erythranthe guttata HOM05D004037 ORTHO05D004744 2.1e-117 426.4 297 70.0
AL5G42050 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 3.5e-117 425.6 340 65.0
Gohir.D11G316700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 3.5e-117 425.6 297 70.0
HPP92_022643 Vanilla planifolia HOM05D004037 ORTHO05D004744 3.5e-117 425.6 290 69.7
AT3G59890 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 6.0e-117 424.9 331 65.6
Sp4g26120 Schrenkiella parvula HOM05D004037 ORTHO05D004744 6.0e-117 424.9 310 68.4
Prupe.7G270700 Prunus persica HOM05D004037 ORTHO05D004744 1.3e-116 423.7 287 71.4
HanXRQChr05g0133541 Helianthus annuus HOM05D004037 ORTHO05D004744 1.7e-116 423.3 334 66.5
Haze_11114 Corylus avellana HOM05D004037 ORTHO05D004744 2.3e-116 422.9 317 66.9
Gohir.D11G317300 Gossypium hirsutum HOM05D004037 ORTHO05D004744 3.0e-116 422.5 295 70.5
FvH4_2g00280 Fragaria vesca HOM05D004037 ORTHO05D004744 6.6e-116 421.4 289 70.9
AT2G44040 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 8.7e-116 421.0 337 63.2
AL4G42910 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 1.5e-115 420.2 340 62.9
A03p24640 Brassica napus HOM05D004037 ORTHO05D004744 1.5e-115 420.2 337 63.8
BraA03t11670Z Brassica rapa HOM05D004037 ORTHO05D004744 1.5e-115 420.2 337 63.8
RcHm_v2.0_Chr2g0126841 Rosa chinensis HOM05D004037 ORTHO05D004744 1.5e-115 420.2 287 70.7
CARHR139200 Cardamine hirsuta HOM05D004037 ORTHO05D004744 5.6e-115 418.3 334 62.9
C03p29380 Brassica napus HOM05D004037 ORTHO05D004744 7.3e-115 417.9 310 67.1
BolC3t15285H Brassica oleracea HOM05D004037 ORTHO05D004744 7.3e-115 417.9 338 63.0
Thhalv10001534m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 7.3e-115 417.9 310 67.4
FAN19G0379 Fragaria x ananassa HOM05D004037 ORTHO05D004744 7.3e-115 417.9 310 66.8
BcaB01g03335 Brassica carinata HOM05D004037 ORTHO05D004744 9.6e-115 417.5 315 65.4
Carub.0005s2663 Capsella rubella HOM05D004037 ORTHO05D004744 9.6e-115 417.5 344 64.2
PSO384G4791 Papaver somniferum HOM05D004037 ORTHO05D004744 9.6e-115 417.5 310 64.8
BcaC01g05190 Brassica carinata HOM05D004037 ORTHO05D004744 1.3e-114 417.2 310 66.8
BolC4t28586H Brassica oleracea HOM05D004037 ORTHO05D004744 1.3e-114 417.2 308 65.9
Aa31LG1G25710 Aethionema arabicum HOM05D004037 ORTHO05D004744 1.6e-114 416.8 290 70.3
A04p33160 Brassica napus HOM05D004037 ORTHO05D004744 2.1e-114 416.4 335 62.4
BraA04t18775Z Brassica rapa HOM05D004037 ORTHO05D004744 2.8e-114 416.0 274 71.5
CSS0028639 Camellia sinensis var. sinensis HOM05D004037 ORTHO05D004744 2.8e-114 416.0 284 69.4
Carub.0004s2659 Capsella rubella HOM05D004037 ORTHO05D004744 3.6e-114 415.6 310 66.8
C04p70860 Brassica napus HOM05D004037 ORTHO05D004744 6.2e-114 414.8 308 65.6
Potri.017G001900 Populus trichocarpa HOM05D004037 ORTHO05D004744 8.1e-114 414.5 277 73.3
ATR0743G110 Amborella trichopoda HOM05D004037 ORTHO05D004744 1.4e-113 413.7 281 70.5
FAN24G1991 Fragaria x ananassa HOM05D004037 ORTHO05D004744 1.5e-112 410.2 272 72.8
Os03g0245100 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 1.5e-112 410.2 279 69.2
Os02g0436400 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 9.9e-112 407.5 309 66.3
BcaB06g29352 Brassica carinata HOM05D004037 ORTHO05D004744 1.7e-111 406.8 303 66.3
Zm00001eb176170 Zea mays HOM05D004037 ORTHO05D004744 6.4e-111 404.8 303 66.7
Cpa.g.sc182.24 Carica papaya HOM05D004037 ORTHO05D004744 1.2e-109 400.6 295 67.8
Lj6C283G4 Lonicera japonica HOM05D004037 ORTHO05D004744 2.1e-109 399.8 357 62.5
Potri.007G145900 Populus trichocarpa HOM05D004037 ORTHO05D004744 6.0e-109 398.3 281 69.0
Nn048s41912 Nelumbo nucifera HOM05D004037 ORTHO05D004744 2.3e-108 396.4 302 66.9
unitig_37.g12156 Utricularia gibba HOM05D004037 ORTHO05D004744 3.0e-108 396.0 292 68.2
SGA_v2.0_scaffold22G09788 Striga asiatica HOM05D004037 ORTHO05D004744 3.9e-108 395.6 305 66.6
SalBow8G4021 Salvia bowleyana HOM05D004037 ORTHO05D004744 9.6e-107 391.0 276 69.9
BcaC02g07140 Brassica carinata HOM05D004037 ORTHO05D004744 1.1e-105 387.5 308 63.0
Oeu050828.1 Olea europaea HOM05D004037 ORTHO05D004744 1.8e-105 386.7 306 64.1
Cfa008527 Carpinus fangiana HOM05D004037 ORTHO05D004744 3.4e-104 382.5 317 60.6
Sabra17G0005900 Salix brachista HOM05D004037 ORTHO05D004744 2.2e-103 379.8 375 55.5
SEGI_29918 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 2.4e-102 376.3 323 57.0
BcaB06g29511 Brassica carinata HOM05D004037 ORTHO05D004744 5.6e-99 365.2 302 60.9
Sopen01g041950 Solanum pennellii HOM05D004037 ORTHO05D004744 4.8e-98 362.1 289 64.4
SMO347G0499 Selaginella moellendorffii HOM05D004037 ORTHO05D004744 6.0e-93 345.1 277 59.2
Pp3c15_7380 Physcomitrium patens HOM05D004037 ORTHO05D004744 2.4e-89 333.2 274 58.8
CBR_g41668 Chara braunii HOM05D004037 ORTHO05D004744 3.1e-89 332.8 309 53.4
Peaxi162Scf00434g00730 Petunia axillaris HOM05D004037 ORTHO05D004744 1.4e-86 323.9 186 84.9
Nitab4.5_0001165g0010 Nicotiana tabacum HOM05D004037 ORTHO05D004744 2.2e-82 310.1 252 63.1
Dinv24475 Davidia involucrata HOM05D004037 ORTHO05D004744 2.0e-80 303.5 254 63.0
Mapoly0033s0134 Marchantia polymorpha HOM05D004037 ORTHO05D004744 2.0e-80 303.5 282 55.7
PRCOL_00006631 Prasinoderma coloniale HOM05D004037 ORTHO05D004744 2.5e-78 296.6 274 50.7
Cre14.g627850 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 2.8e-74 283.1 285 49.8
MCO16G413 Micromonas commoda HOM05D004037 ORTHO05D004744 1.8e-73 280.4 291 52.9
FAN20G0369 Fragaria x ananassa HOM05D004037 ORTHO05D004744 2.7e-69 266.5 183 69.9
Peaxi162Scf00434g00733 Petunia axillaris HOM05D004037 ORTHO05D004744 3.1e-65 253.1 218 63.3
Peaxi162Scf00434g00740 Petunia axillaris HOM05D004037 ORTHO05D004744 5.0e-63 245.7 174 73.6
Gohir.D09G124433 Gossypium hirsutum HOM05D004037 ORTHO05D004744 2.7e-61 240.0 239 58.2
Actinidia11426 Actinidia chinensis HOM05D004037 ORTHO05D004744 1.3e-58 231.1 312 45.2
Nn048s41913 Nelumbo nucifera HOM05D004037 ORTHO05D004744 1.3e-58 231.1 173 68.8
Gorai.006G143300 Gossypium raimondii HOM05D004037 ORTHO05D004744 3.8e-55 219.5 233 54.5
Zm00001eb398800 Zea mays HOM05D004037 ORTHO05D004744 1.5e-51 207.6 161 62.1
Lsat_1_v5_gn_9_123180 Lactuca sativa HOM05D002510 ORTHO05D007210 2.9e-47 193.4 189 56.1
BcaB01g03344 Brassica carinata HOM05D004037 ORTHO05D004744 4.2e-46 189.5 294 42.9
AagrBONN_evm.TU.Sc2ySwM_368.1842 Anthoceros agrestis HOM05D004037 ORTHO05D004744 5.9e-40 169.1 180 49.4
AagrBONN_evm.TU.Sc2ySwM_368.1728 Anthoceros agrestis HOM05D004037 ORTHO05D004744 6.8e-36 155.6 138 57.2
FvH4_2g00640 Fragaria vesca HOM05D004037 ORTHO05D004744 3.7e-34 149.8 90 77.8
Cre16.g656300 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 1.0e-31 141.7 280 31.4
PSO451G0001 Papaver somniferum HOM05D004037 ORTHO05D004744 1.7e-31 141.0 77 85.7
MBI01_g38182_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 6.4e-26 122.5 75 77.3
RhsimUnG0159300 Rhododendron simsii HOM05D004037 ORTHO05D004744 2.7e-24 117.1 152 47.4
Peaxi162Scf00609g00310 Petunia axillaris HOM05D004037 ORTHO05D019316 5.0e-23 112.8 68 80.9
AagrBONN_evm.TU.Sc2ySwM_152.2 Anthoceros agrestis HOM05D004037 ORTHO05D004744 2.1e-21 107.5 164 40.2
MD02G1000400 Malus domestica HOM05D004037 ORTHO05D004744 5.2e-20 102.8 89 55.1
ATR0716G071 Amborella trichopoda HOM05D004037 ORTHO05D004744 1.7e-18 97.8 66 77.3
AagrBONN_evm.TU.Sc2ySwM_344.5552 Anthoceros agrestis HOM05D004037 ORTHO05D004744 2.3e-15 87.4 83 51.8
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.7e-08 63.9 86 44.2
SEGI_36179 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 4.6e-08 63.2 181 26.5


User provided reference genes

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