Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002572 Daucus carota HOM05D000611 ORTHO05D004334 5.7e-153 544.3 285 100.0
DCAR_025872 Daucus carota HOM05D000611 ORTHO05D004334 6.5e-24 115.5 171 43.3
DCAR_003177 Daucus carota HOM05D000611 ORTHO05D004334 3.6e-22 109.8 109 56.0
Dinv19017 Davidia involucrata HOM05D000611 ORTHO05D004334 4.7e-22 109.4 164 44.5
GSVIVG01030843001 Vitis vinifera HOM05D000611 ORTHO05D004334 6.1e-22 109.0 165 43.0
Hma1.2p1_0283F.1_g113480 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 5.2e-21 105.9 163 44.2
CiPaw.15G093300 Carya illinoinensis HOM05D000611 ORTHO05D004334 1.1e-20 104.8 159 41.5
Dinv14884 Davidia involucrata HOM05D000611 ORTHO05D004334 7.4e-20 102.1 151 45.0
Peaxi162Scf00003g00219 Petunia axillaris HOM05D000611 ORTHO05D004334 1.7e-19 100.9 162 39.5
Eucgr.J01547 Eucalyptus grandis HOM05D000611 ORTHO05D004334 2.2e-19 100.5 163 39.9
Nitab4.5_0003360g0040 Nicotiana tabacum HOM05D000611 ORTHO05D004334 2.2e-19 100.5 162 38.3
CSS0050254 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 3.7e-19 99.8 160 40.0
Manes.01G116100 Manihot esculenta HOM05D000611 ORTHO05D004334 4.8e-19 99.4 180 38.3
Cc07_g08100 Coffea canephora HOM05D000611 ORTHO05D004334 6.3e-19 99.0 222 33.3
Haze_14232 Corylus avellana HOM05D000611 ORTHO05D004334 6.3e-19 99.0 163 40.5
Nitab4.5_0002664g0080 Nicotiana tabacum HOM05D000611 ORTHO05D004334 6.3e-19 99.0 156 38.5
QL11p039394 Quercus lobata HOM05D000611 ORTHO05D004334 8.2e-19 98.6 173 39.9
Cfa007833 Carpinus fangiana HOM05D000611 ORTHO05D004334 1.1e-18 98.2 163 39.9
Sopen02g036080 Solanum pennellii HOM05D000611 ORTHO05D004334 2.4e-18 97.1 162 38.9
Eucgr.J01631 Eucalyptus grandis HOM05D000611 ORTHO05D004334 3.1e-18 96.7 162 40.1
Gohir.D12G055600 Gossypium hirsutum HOM05D000611 ORTHO05D004334 3.1e-18 96.7 163 41.1
Hma1.2p1_0832F.1_g225560 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 3.1e-18 96.7 182 41.2
QL11p002176 Quercus lobata HOM05D000611 ORTHO05D004334 3.1e-18 96.7 165 38.8
Actinidia22792 Actinidia chinensis HOM05D000611 ORTHO05D004334 4.1e-18 96.3 163 41.7
Ciclev10011836m.g Citrus clementina HOM05D000611 ORTHO05D004334 4.1e-18 96.3 226 34.1
Gorai.008G058500 Gossypium raimondii HOM05D000611 ORTHO05D004334 4.1e-18 96.3 163 41.1
Gohir.A12G056200 Gossypium hirsutum HOM05D000611 ORTHO05D004334 5.3e-18 95.9 202 35.6
Rhsim08G0086400 Rhododendron simsii HOM05D000611 ORTHO05D004334 7.0e-18 95.5 181 38.7
TAR622G0440 Trochodendron aralioides HOM05D000611 ORTHO05D004334 7.0e-18 95.5 163 39.3
CAN.G1061.46 Capsicum annuum HOM05D000611 ORTHO05D004334 1.2e-17 94.7 162 37.0
Thecc.04G119400 Theobroma cacao HOM05D000611 ORTHO05D004334 2.0e-17 94.0 196 38.3
Duzib133G1511 Durio zibethinus HOM05D000611 ORTHO05D004334 2.6e-17 93.6 163 40.5
MSTRG.15320 Avicennia marina HOM05D000611 ORTHO05D004334 4.5e-17 92.8 162 37.7
Sabra15G0047000 Salix brachista HOM05D000949 ORTHO05D004334 5.9e-17 92.4 163 40.5
Sabra17G0106600 Salix brachista HOM05D000611 ORTHO05D004334 5.9e-17 92.4 163 40.5
TAR374G0184 Trochodendron aralioides HOM05D000611 ORTHO05D004334 1.7e-16 90.9 138 37.7
Gorai.010G046100 Gossypium raimondii HOM05D000611 ORTHO05D004334 2.2e-16 90.5 157 38.9
Duzib211G0073 Durio zibethinus HOM05D000611 ORTHO05D004334 3.8e-16 89.7 163 39.9
CSS0039210 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 5.0e-16 89.4 173 37.0
MBI16_g23759_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D004334 5.0e-16 89.4 168 38.7
QL11p003934 Quercus lobata HOM05D000611 ORTHO05D004334 5.0e-16 89.4 190 38.4
COL.COLO4_15730 Corchorus olitorius HOM05D000611 ORTHO05D004334 6.5e-16 89.0 163 40.5
Sc10g0000760 Simmondsia chinensis HOM05D000611 ORTHO05D004334 1.1e-15 88.2 150 37.3
Nn3g20745 Nelumbo nucifera HOM05D000611 ORTHO05D004334 1.9e-15 87.4 162 37.7
Rhsim08G0147400 Rhododendron simsii HOM05D000611 ORTHO05D004334 3.2e-15 86.7 145 37.2
Actinidia17227 Actinidia chinensis HOM05D000611 ORTHO05D004334 7.2e-15 85.5 110 47.3
Potri.017G126700 Populus trichocarpa HOM05D000611 ORTHO05D004334 7.2e-15 85.5 115 43.5
TWI18G1238 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 1.6e-14 84.3 149 38.3
arahy.Tifrunner.gnm1.ann1.J7PSRM Arachis hypogaea HOM05D000611 ORTHO05D004334 2.1e-14 84.0 141 36.2
QL09p038966 Quercus lobata HOM05D000611 ORTHO05D004334 3.6e-14 83.2 112 46.4
TWI12G1101 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 6.1e-14 82.4 157 36.9
PSO170G1854 Papaver somniferum HOM05D000611 ORTHO05D004334 8.0e-14 82.0 144 38.9
Atru.chr1.1837 Acer truncatum HOM05D000611 ORTHO05D004334 2.3e-13 80.5 163 35.0
Aqoxy3G00114 Aquilegia oxysepala HOM05D000611 ORTHO05D004334 2.3e-13 80.5 110 39.1
arahy.Tifrunner.gnm1.ann1.HDGD4N Arachis hypogaea HOM05D000611 ORTHO05D004334 2.3e-13 80.5 141 35.5
vmacro18048 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 2.3e-13 80.5 135 39.3
vmacro22550 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 2.3e-13 80.5 163 33.7
Nn4g24174 Nelumbo nucifera HOM05D000611 ORTHO05D004334 3.0e-13 80.1 136 37.5
Phvul.008G234400 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 4.0e-13 79.7 177 35.0
Dinv26577 Davidia involucrata HOM05D000611 ORTHO05D004334 5.2e-13 79.3 148 35.8
Actinidia36368 Actinidia chinensis HOM05D000611 ORTHO05D004334 6.8e-13 79.0 130 36.9
CsaV3_3G021570 Cucumis sativus L. HOM05D000611 ORTHO05D004334 6.8e-13 79.0 166 34.9
Lsat_1_v5_gn_2_79980 Lactuca sativa HOM05D000379 ORTHO05D004334 6.8e-13 79.0 163 33.1
Sc15g0002490 Simmondsia chinensis HOM05D000611 ORTHO05D004334 1.2e-12 78.2 212 33.0
MBI10_g08554_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D004334 2.0e-12 77.4 157 35.0
AUR62023231 Chenopodium quinoa HOM05D000611 ORTHO05D004334 2.6e-12 77.0 200 31.0
Sed0014398 Sechium edule HOM05D000611 ORTHO05D004334 4.4e-12 76.3 109 41.3
CANSAT78G1071 Cannabis sativa HOM05D000611 ORTHO05D004334 5.7e-12 75.9 178 32.0
MD09G1262200 Malus domestica HOM05D000611 ORTHO05D004334 7.5e-12 75.5 159 36.5
CAN.G1129.18 Capsicum annuum HOM05D000611 ORTHO05D004334 9.7e-12 75.1 169 32.5
AUR62023184 Chenopodium quinoa HOM05D000611 ORTHO05D004334 9.7e-12 75.1 199 30.2
arahy.Tifrunner.gnm1.ann1.FBT475 Arachis hypogaea HOM05D000611 ORTHO05D004334 1.3e-11 74.7 135 36.3
CDE04G0197 Ceratophyllum demersum HOM05D000543 ORTHO05D004334 1.3e-11 74.7 171 32.2
vmacro22900 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 1.3e-11 74.7 109 38.5
Migut.L00463 Erythranthe guttata HOM05D000611 ORTHO05D004334 1.7e-11 74.3 162 33.3
Glyma.14G069800 Glycine max HOM05D000611 ORTHO05D004334 2.8e-11 73.6 174 36.2
Lalb_Chr20g0116941 Lupinus albus HOM05D000611 ORTHO05D004334 2.8e-11 73.6 181 32.6
MELO3C020280.2 Cucumis melo HOM05D000611 ORTHO05D004334 6.3e-11 72.4 139 35.3
Glyma.11G217600 Glycine max HOM05D000611 ORTHO05D004334 6.3e-11 72.4 113 39.8
LjContig00141g0016319 Lotus japonicus HOM05D000611 ORTHO05D004334 1.1e-10 71.6 113 36.3
vmacro17597 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 1.4e-10 71.2 101 40.6
CDE06G1088 Ceratophyllum demersum HOM05D000611 ORTHO05D004334 2.4e-10 70.5 149 32.9
Psat2g041880 Pisum sativum HOM05D000611 ORTHO05D004334 2.4e-10 70.5 215 29.8
SGA_v2.0_scaffold63G21737 Striga asiatica HOM05D000611 ORTHO05D004334 2.4e-10 70.5 176 31.8
Cfa009035 Carpinus fangiana HOM05D000611 ORTHO05D004334 4.1e-10 69.7 140 36.4
Phvul.001G231400 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 5.3e-10 69.3 143 35.7
HPP92_009716 Vanilla planifolia HOM05D000611 ORTHO05D004334 5.3e-10 69.3 162 34.0
ECA238G1988 Erigeron canadensis HOM05D000611 ORTHO05D004334 9.1e-10 68.6 159 30.2
MD17G1257100 Malus domestica HOM05D000611 ORTHO05D004334 9.1e-10 68.6 157 35.7
Glyma.04G146300 Glycine max HOM05D000611 ORTHO05D004334 1.6e-09 67.8 149 32.9
Phvul.008G234500 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 1.6e-09 67.8 181 33.1
EL10Ac2g04473 Beta vulgaris HOM05D000611 ORTHO05D004334 2.0e-09 67.4 167 29.9
AUR62012480 Chenopodium quinoa HOM05D000611 ORTHO05D004334 2.0e-09 67.4 91 39.6
Ca_05862_v3 Cicer arietinum L. HOM05D000611 ORTHO05D004334 2.7e-09 67.0 140 37.9
PGR119G2064 Punica granatum HOM05D000611 ORTHO05D004334 4.5e-09 66.2 150 33.3
VMungo0647G1718 Vigna mungo HOM05D000611 ORTHO05D004334 4.5e-09 66.2 151 35.1
PSO017G0779 Papaver somniferum HOM05D000611 ORTHO05D004334 5.9e-09 65.9 103 39.8
PSO170G2195 Papaver somniferum HOM05D000611 ORTHO05D004334 5.9e-09 65.9 130 34.6
TPR.G3467 Trifolium pratense HOM05D000611 ORTHO05D004334 7.7e-09 65.5 142 31.7
EL10Ac1g01296 Beta vulgaris HOM05D000611 ORTHO05D004334 1.0e-08 65.1 102 39.2
Medtr5g079490 Medicago truncatula HOM05D000611 ORTHO05D004334 1.0e-08 65.1 125 35.2
ClCG05G011010 Citrullus lanatus HOM05D000611 ORTHO05D004334 1.3e-08 64.7 109 39.4
arahy.Tifrunner.gnm1.ann1.1QGT1E Arachis hypogaea HOM05D000611 ORTHO05D004334 2.2e-08 63.9 141 33.3
arahy.Tifrunner.gnm1.ann1.WY3AB3 Arachis hypogaea HOM05D000611 ORTHO05D004334 2.2e-08 63.9 176 30.7
CSS0037318 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 2.2e-08 63.9 138 32.6
Ciclev10010802m.g Citrus clementina HOM05D000611 ORTHO05D004334 2.2e-08 63.9 128 33.6
ECA232G4037 Erigeron canadensis HOM05D000611 ORTHO05D004334 2.9e-08 63.5 182 29.1
Aa31LG5G23450 Aethionema arabicum HOM05D000611 ORTHO05D004334 6.5e-08 62.4 98 41.8
CSS0013647 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 1.1e-07 61.6 137 32.8
Gorai.006G056800 Gossypium raimondii HOM05D000611 ORTHO05D004334 1.1e-07 61.6 80 42.5
Hund16210 Selenicereus undatus HOM05D000611 ORTHO05D004334 1.1e-07 61.6 144 31.9
Medtr4g007820 Medicago truncatula HOM05D000611 ORTHO05D004334 1.5e-07 61.2 108 35.2
Cc04_g06500 Coffea canephora HOM05D000611 ORTHO05D004334 1.9e-07 60.8 153 34.0
arahy.Tifrunner.gnm1.ann1.E9G7WB Arachis hypogaea HOM05D000611 ORTHO05D004334 2.5e-07 60.5 177 29.9
Haze_12064 Corylus avellana HOM05D000611 ORTHO05D004334 2.5e-07 60.5 84 42.9
Os08g0384100 Oryza sativa ssp. japonica HOM05D000611 ORTHO05D004334 2.5e-07 60.5 92 35.9
HanXRQChr09g0262221 Helianthus annuus HOM05D000611 ORTHO05D004334 3.2e-07 60.1 161 26.7
Sopen03g037880 Solanum pennellii HOM05D000611 ORTHO05D004334 4.2e-07 59.7 81 37.0
Lalb_Chr11g0075021 Lupinus albus HOM05D000611 ORTHO05D004334 5.5e-07 59.3 129 34.1
Nitab4.5_0004028g0020 Nicotiana tabacum HOM05D000611 ORTHO05D004334 5.5e-07 59.3 116 34.5
PGSC0003DMG400037684 Solanum tuberosum HOM05D000611 ORTHO05D004334 5.5e-07 59.3 123 35.8
Solyc03g118950.3 Solanum lycopersicum HOM05D000611 ORTHO05D004334 7.2e-07 58.9 155 30.3
THA.LOC104826735 Tarenaya hassleriana HOM05D000611 ORTHO05D004334 7.2e-07 58.9 148 30.4
TWI60G0311 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 9.4e-07 58.5 171 28.1
Lj6g0027718 Lotus japonicus HOM05D000611 ORTHO05D004334 1.2e-06 58.2 91 35.2
Nitab4.5_0001986g0090 Nicotiana tabacum HOM05D000611 ORTHO05D004334 1.6e-06 57.8 131 31.3
Lalb_Chr02g0154471 Lupinus albus HOM05D000611 ORTHO05D004334 2.7e-06 57.0 65 44.6
PGSC0003DMG400035218 Solanum tuberosum HOM05D000611 ORTHO05D004334 3.6e-06 56.6 111 33.3
CARHR206460 Cardamine hirsuta HOM05D000611 ORTHO05D004334 6.1e-06 55.8 71 38.0
DCAR_014728 Daucus carota HOM05D000080 ORTHO05D000053 6.1e-06 55.8 80 36.2
Lalb_Chr18g0053361 Lupinus albus HOM05D000611 ORTHO05D004334 6.1e-06 55.8 79 38.0
ATR0598G054 Amborella trichopoda HOM05D000611 ORTHO05D004334 8.0e-06 55.5 112 36.6


User provided reference genes

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