Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002545 Daucus carota HOM05D003975 ORTHO05D045060 2.2e-63 245.7 150 100.0
Gorai.005G166300 Gossypium raimondii HOM05D006400 ORTHO05D008039 1.7e-15 86.7 85 51.8
Gohir.D02G148280 Gossypium hirsutum HOM05D006400 ORTHO05D008039 1.9e-14 83.2 80 52.5
Carub.0008s2305 Capsella rubella HOM05D003975 ORTHO05D009762 1.4e-09 67.0 84 40.5
ECA238G3715 Erigeron canadensis HOM05D000162 ORTHO05D000090 5.3e-09 65.1 73 45.2
CARHR276150 Cardamine hirsuta HOM05D003975 ORTHO05D009762 1.2e-08 63.9 85 40.0
FAN25G0683 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.5e-08 63.5 72 38.9
Peaxi162Scf00154g00035 Petunia axillaris HOM05D000162 ORTHO05D000090 1.5e-08 63.5 67 40.3
Peaxi162Scf00154g00210 Petunia axillaris HOM05D000162 ORTHO05D000090 3.4e-08 62.4 67 38.8
SHI09587 Sapria himalayana HOM05D006400 ORTHO05D008039 3.4e-08 62.4 52 53.8
BcaNung03569 Brassica carinata HOM05D003975 ORTHO05D009762 4.5e-08 62.0 85 37.6
A01p18130 Brassica napus HOM05D003975 ORTHO05D009762 4.5e-08 62.0 85 37.6
C01p23090 Brassica napus HOM05D003975 ORTHO05D009762 4.5e-08 62.0 85 37.6
BolC1t02243H Brassica oleracea HOM05D003975 ORTHO05D009762 4.5e-08 62.0 85 37.6
BraA01t01768Z Brassica rapa HOM05D003975 ORTHO05D009762 4.5e-08 62.0 85 37.6
FAN21G3095 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.9e-08 61.6 72 37.5
FAN21G3177 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.9e-08 61.6 72 37.5
Sp2g25540 Schrenkiella parvula HOM05D003975 ORTHO05D009762 5.9e-08 61.6 85 37.6
AL8G39200 Arabidopsis lyrata HOM05D003975 ORTHO05D009762 1.0e-07 60.8 85 38.8
Cc07_g18990 Coffea canephora HOM05D000162 ORTHO05D000090 1.0e-07 60.8 125 27.2
CDE02G3715 Ceratophyllum demersum HOM05D002444 ORTHO05D009235 1.7e-07 60.1 136 30.1
Gohir.A11G027600 Gossypium hirsutum HOM05D006400 ORTHO05D008039 1.7e-07 60.1 86 38.4
Peaxi162Scf00154g00039 Petunia axillaris HOM05D000162 ORTHO05D000090 1.7e-07 60.1 72 38.9
FvH4_3g39940 Fragaria vesca HOM05D000162 ORTHO05D000090 2.2e-07 59.7 66 39.4
Thhalv10003595m.g Eutrema salsugineum HOM05D003975 ORTHO05D009762 2.9e-07 59.3 83 37.3
FvH4_3g43150 Fragaria vesca HOM05D000162 ORTHO05D000090 2.9e-07 59.3 73 41.1
FvH4_3g43170 Fragaria vesca HOM05D000162 ORTHO05D000090 2.9e-07 59.3 73 41.1
Manes.14G149022 Manihot esculenta HOM05D006400 ORTHO05D008039 2.9e-07 59.3 59 52.5
VMungo1215G1828 Vigna mungo HOM05D006400 ORTHO05D045060 2.9e-07 59.3 62 46.8
FAN05G1965 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.8e-07 58.9 86 36.0
ECA238G1168 Erigeron canadensis HOM05D000162 ORTHO05D000090 5.0e-07 58.5 69 40.6
MD11G1115600 Malus domestica HOM05D000162 ORTHO05D000090 5.0e-07 58.5 65 43.1
Peaxi162Scf00154g00046 Petunia axillaris HOM05D000162 ORTHO05D000090 5.0e-07 58.5 64 39.1
HanXRQChr07g0204091 Helianthus annuus HOM05D000162 ORTHO05D000090 6.5e-07 58.2 69 44.9
RcHm_v2.0_Chr5g0071481 Rosa chinensis HOM05D000162 ORTHO05D000090 6.5e-07 58.2 72 37.5
RcHm_v2.0_Chr5g0071941 Rosa chinensis HOM05D000162 ORTHO05D000090 6.5e-07 58.2 64 42.2
FAN07G1899 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.5e-07 57.8 86 37.2
Actinidia17341 Actinidia chinensis HOM05D006556 ORTHO05D008146 1.1e-06 57.4 73 35.6
Actinidia32984 Actinidia chinensis HOM05D006556 ORTHO05D008146 1.1e-06 57.4 73 35.6
FvH4_3g42430 Fragaria vesca HOM05D000162 ORTHO05D000090 1.1e-06 57.4 72 40.3
Hund21891 Selenicereus undatus HOM05D008994 ORTHO05D010954 1.1e-06 57.4 140 27.9
SMO353G0384 Selaginella moellendorffii HOM05D017046 ORTHO05D020998 1.4e-06 57.0 86 38.4
Dinv41259 Davidia involucrata HOM05D000162 ORTHO05D000090 2.5e-06 56.2 70 38.6
HanXRQChr13g0420881 Helianthus annuus HOM05D000162 ORTHO05D000090 2.5e-06 56.2 71 39.4
Peaxi162Scf00154g00321 Petunia axillaris HOM05D000162 ORTHO05D000090 3.2e-06 55.8 64 37.5
CSS0039062 Camellia sinensis var. sinensis HOM05D006556 ORTHO05D008146 4.2e-06 55.5 75 36.0
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 4.2e-06 55.5 74 36.5
FAN16G0588 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.2e-06 55.5 73 39.7
MSTRG.9605 Avicennia marina HOM05D000162 ORTHO05D000090 5.5e-06 55.1 72 37.5
Cfa000760 Carpinus fangiana HOM05D006556 ORTHO05D008146 5.5e-06 55.1 74 36.5
HanXRQChr07g0204971 Helianthus annuus HOM05D000162 ORTHO05D000090 5.5e-06 55.1 69 40.6
HanXRQChr14g0435461 Helianthus annuus HOM05D000162 ORTHO05D000090 5.5e-06 55.1 66 42.4
Hma1.2p1_1798F.1_g302890 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 5.5e-06 55.1 70 37.1
PGSC0003DMG400039297 Solanum tuberosum HOM05D006400 ORTHO05D008039 5.5e-06 55.1 81 34.6
TPR.G9763 Trifolium pratense HOM05D008100 ORTHO05D009715 5.5e-06 55.1 85 32.9
Carub.0003s3161 Capsella rubella HOM05D006556 ORTHO05D008146 7.2e-06 54.7 75 33.3
CARHR051000 Cardamine hirsuta HOM05D010315 ORTHO05D011376 7.2e-06 54.7 67 35.8
FvH4_3g39890 Fragaria vesca HOM05D000162 ORTHO05D000090 7.2e-06 54.7 66 36.4
HanXRQChr07g0204921 Helianthus annuus HOM05D000162 ORTHO05D000090 7.2e-06 54.7 66 40.9
HanXRQChr13g0420351 Helianthus annuus HOM05D000162 ORTHO05D000090 7.2e-06 54.7 69 42.0
FAN16G0919 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.4e-06 54.3 66 34.8
HanXRQChr07g0204981 Helianthus annuus HOM05D000162 ORTHO05D000090 9.4e-06 54.3 69 39.1


User provided reference genes

Program Settings