Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002544 Daucus carota HOM05D000086 ORTHO05D002912 4.9e-61 237.7 124 100.0
DCAR_002543 Daucus carota HOM05D000086 ORTHO05D002912 4.1e-15 85.1 154 44.2
DCAR_030429 Daucus carota HOM05D000086 ORTHO05D002912 1.0e-13 80.5 89 56.2
DCAR_002542 Daucus carota HOM05D000086 ORTHO05D002912 8.5e-13 77.4 184 37.5
Thecc.08G165900 Theobroma cacao HOM05D000086 ORTHO05D002912 6.8e-10 67.8 93 45.2
Lalb_Chr16g0390721 Lupinus albus HOM05D000086 ORTHO05D002912 2.6e-09 65.9 101 42.6
QL02p029662 Quercus lobata HOM05D000086 ORTHO05D002912 2.6e-09 65.9 89 44.9
MBI06_g10868_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D002912 3.4e-09 65.5 93 48.4
Gorai.004G266400 Gossypium raimondii HOM05D000086 ORTHO05D002912 4.4e-09 65.1 91 45.1
Gohir.A08G229500 Gossypium hirsutum HOM05D000086 ORTHO05D002912 9.8e-09 63.9 92 44.6
Gohir.D08G249800 Gossypium hirsutum HOM05D000086 ORTHO05D002912 9.8e-09 63.9 92 44.6
Potri.003G142600 Populus trichocarpa HOM05D000086 ORTHO05D002912 2.8e-08 62.4 91 46.2
Duzib116G0331 Durio zibethinus HOM05D000086 ORTHO05D002912 3.7e-08 62.0 94 43.6
Oeu022695.1 Olea europaea HOM05D000086 ORTHO05D002912 3.7e-08 62.0 97 43.3
Lj4g0025211 Lotus japonicus HOM05D000086 ORTHO05D002912 6.3e-08 61.2 101 41.6
Oeu030887.1 Olea europaea HOM05D000086 ORTHO05D002912 6.3e-08 61.2 97 44.3
Psat5g108400 Pisum sativum HOM05D000086 ORTHO05D002912 8.3e-08 60.8 96 42.7
BcaNung01107 Brassica carinata HOM05D000086 ORTHO05D002912 1.4e-07 60.1 95 45.3
Haze_09101 Corylus avellana HOM05D000086 ORTHO05D002912 1.4e-07 60.1 89 42.7
Potri.001G088400 Populus trichocarpa HOM05D000086 ORTHO05D002912 1.4e-07 60.1 94 42.6
ECA233G6093 Erigeron canadensis HOM05D000086 ORTHO05D002912 1.8e-07 59.7 82 47.6
Lsat_1_v5_gn_6_71661 Lactuca sativa HOM05D000086 ORTHO05D002912 1.8e-07 59.7 82 47.6
Cpa.g.sc15.6 Carica papaya HOM05D000086 ORTHO05D002912 2.4e-07 59.3 93 45.2
Manes.02G007100 Manihot esculenta HOM05D000086 ORTHO05D002912 2.4e-07 59.3 93 41.9
arahy.Tifrunner.gnm1.ann1.60J8GE Arachis hypogaea HOM05D000086 ORTHO05D002912 5.4e-07 58.2 97 38.1
A01p15280 Brassica napus HOM05D000086 ORTHO05D002912 5.4e-07 58.2 94 45.7
Manes.01G052600 Manihot esculenta HOM05D000086 ORTHO05D002912 5.4e-07 58.2 93 39.8
Nn1g00280 Nelumbo nucifera HOM05D000086 ORTHO05D002912 5.4e-07 58.2 93 45.2
Sabra01G0064700 Salix brachista HOM05D000086 ORTHO05D002912 5.4e-07 58.2 94 41.5
Sp7g21970 Schrenkiella parvula HOM05D000086 ORTHO05D002912 5.4e-07 58.2 95 45.3
AL7G29290 Arabidopsis lyrata HOM05D000086 ORTHO05D002912 7.0e-07 57.8 95 44.2
AT4G24015 Arabidopsis thaliana HOM05D000086 ORTHO05D002912 7.0e-07 57.8 95 44.2
DCAR_002541 Daucus carota HOM05D000086 ORTHO05D002912 7.0e-07 57.8 70 51.4
Lj6g0016186 Lotus japonicus HOM05D000086 ORTHO05D002912 7.0e-07 57.8 96 38.5
EL10Ac5g12948 Beta vulgaris HOM05D000086 ORTHO05D002912 9.2e-07 57.4 94 44.7
arahy.Tifrunner.gnm1.ann1.1IN0XH Arachis hypogaea HOM05D000086 ORTHO05D002912 1.2e-06 57.0 97 37.1
CiPaw.12G080900 Carya illinoinensis HOM05D000086 ORTHO05D002912 1.2e-06 57.0 90 42.2
Glyma.08G024800 Glycine max HOM05D000086 ORTHO05D002912 1.2e-06 57.0 97 37.1
TPR.G33602 Trifolium pratense HOM05D000086 ORTHO05D002912 1.2e-06 57.0 96 40.6
Hma1.2p1_0440F.1_g153540 Hydrangea macrophylla HOM05D000086 ORTHO05D002912 1.6e-06 56.6 77 41.6
BcaNung04249 Brassica carinata HOM05D000086 ORTHO05D002912 2.0e-06 56.2 95 44.2
C07p53290 Brassica napus HOM05D000086 ORTHO05D002912 2.0e-06 56.2 95 44.2
BolC7t45824H Brassica oleracea HOM05D000086 ORTHO05D002912 2.0e-06 56.2 95 44.2
Glyma.13G002800 Glycine max HOM05D000086 ORTHO05D002912 2.0e-06 56.2 96 39.6
MBI07_g24778_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D002912 2.7e-06 55.8 95 43.2
Aa31LG6G7220 Aethionema arabicum HOM05D000086 ORTHO05D002912 3.5e-06 55.5 89 43.8
Glyma.05G218700 Glycine max HOM05D000086 ORTHO05D002912 4.5e-06 55.1 98 37.8
COL.COLO4_25065 Corchorus olitorius HOM05D000086 ORTHO05D002912 5.9e-06 54.7 95 40.0
MSTRG.10181 Avicennia marina HOM05D002688 ORTHO05D002911 7.7e-06 54.3 97 42.3
CARHR231420 Cardamine hirsuta HOM05D000086 ORTHO05D002912 7.7e-06 54.3 95 43.2
Prupe.5G124100 Prunus persica HOM05D000086 ORTHO05D002912 7.7e-06 54.3 97 40.2
GSVIVG01019592001 Vitis vinifera HOM05D000086 ORTHO05D002912 7.7e-06 54.3 93 44.1


User provided reference genes

Program Settings