Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 4.5e-244 847.4 411 100.0
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 4.6e-172 608.2 411 72.7
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 2.2e-166 589.3 422 69.2
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 1.4e-165 586.6 419 69.5
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 1.3e-163 580.1 401 69.1
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 2.3e-163 579.3 422 68.2
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 2.1e-161 572.8 422 67.8
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 6.9e-160 567.8 423 67.4
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 1.2e-159 567.0 409 68.0
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 3.4e-159 565.5 425 66.8
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 4.5e-159 565.1 407 67.8
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 7.6e-159 564.3 415 67.2
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 7.6e-159 564.3 423 66.7
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 1.7e-158 563.1 422 68.2
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 6.5e-158 561.2 420 67.4
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 2.5e-157 559.3 417 67.4
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 2.5e-157 559.3 413 67.3
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 4.2e-157 558.5 432 63.7
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 4.2e-157 558.5 420 67.1
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 7.1e-157 557.8 425 67.5
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 7.1e-157 557.8 410 67.3
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 9.3e-157 557.4 419 66.6
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 2.7e-156 555.8 425 66.1
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 2.7e-156 555.8 432 66.4
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 1.1e-154 550.4 422 64.0
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 1.5e-154 550.1 424 65.3
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 2.5e-154 549.3 391 69.1
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 3.3e-154 548.9 411 67.4
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 2.8e-153 545.8 426 64.3
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 1.1e-152 543.9 409 64.8
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 1.8e-152 543.1 395 67.3
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.5e-151 540.0 421 64.6
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 2.6e-151 539.3 410 65.9
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 4.5e-151 538.5 403 67.0
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 1.0e-150 537.3 447 62.6
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 6.5e-150 534.6 410 65.4
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 1.1e-149 533.9 374 67.6
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 1.4e-149 533.5 419 64.7
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 1.9e-149 533.1 363 70.2
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 2.5e-149 532.7 433 63.3
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 5.5e-149 531.6 420 64.5
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 1.8e-147 526.6 393 67.7
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 3.0e-147 525.8 408 64.7
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 5.1e-147 525.0 415 63.9
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 6.7e-147 524.6 436 62.2
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 8.8e-147 524.2 412 64.6
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 9.7e-146 520.8 404 65.6
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 2.8e-145 519.2 404 65.6
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 1.4e-144 516.9 419 63.7
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 2.6e-143 512.7 356 70.2
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 1.1e-141 507.3 384 65.1
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 4.2e-141 505.4 416 59.6
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 1.5e-138 496.9 392 63.0
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 2.4e-136 489.6 409 58.7
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 3.8e-134 482.3 410 63.2
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 8.5e-134 481.1 409 60.6
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 1.8e-131 473.4 454 55.5
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 5.7e-130 468.4 382 59.2
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 4.1e-128 462.2 411 57.2
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 7.0e-128 461.5 386 60.6
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 2.0e-127 459.9 341 67.4
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 2.9e-126 456.1 337 67.1
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 4.2e-125 452.2 372 57.8
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 1.2e-122 444.1 293 73.7
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 7.0e-120 434.9 408 55.1
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 2.0e-119 433.3 422 55.7
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 5.2e-115 418.7 442 54.3
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 6.3e-113 411.8 278 70.5
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 1.2e-111 407.5 301 67.4
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 2.7e-111 406.4 304 64.1
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 1.1e-109 401.0 335 60.6
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 1.4e-107 394.0 375 56.5
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 3.2e-104 382.9 431 49.0
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 7.8e-103 378.3 289 64.4
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 4.1e-96 355.9 435 48.0
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 1.6e-95 354.0 411 46.0
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 6.6e-94 348.6 306 55.9
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 1.2e-92 344.4 353 50.4
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 1.7e-86 323.9 294 56.8
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 4.3e-77 292.7 205 66.3
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.2e-76 291.2 198 71.7
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 2.6e-74 283.5 363 44.9
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 9.9e-74 281.6 216 62.0
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 9.3e-72 275.0 418 39.5
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 5.8e-66 255.8 260 51.9
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.2e-58 231.5 203 59.1
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 1.2e-58 231.5 277 48.7
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 6.0e-47 192.6 134 72.4
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 1.1e-45 188.3 186 53.2
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 4.2e-40 169.9 129 69.8
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 2.8e-36 157.1 166 47.0
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.4e-32 144.8 101 68.3
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 1.4e-30 138.3 124 59.7
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 3.0e-30 137.1 110 65.5
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 7.2e-24 115.9 116 54.3
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.8e-19 101.3 130 45.4
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.8e-19 101.3 130 45.4
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 1.2e-18 98.6 110 45.5
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 2.9e-17 94.0 90 53.3
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 5.5e-16 89.7 74 63.5
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.5e-13 81.6 86 50.0
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 4.4e-13 80.1 69 58.0
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.2e-10 72.0 63 61.9
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 1.3e-09 68.6 42 81.0
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 6.1e-07 59.7 62 50.0


User provided reference genes

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