Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002503 Daucus carota HOM05D001581 ORTHO05D001479 1.0e-27 125.9 60 100.0
DCAR_001719 Daucus carota HOM05D001581 ORTHO05D001479 9.2e-13 76.3 57 64.9
MD13G1157500 Malus domestica HOM05D001581 ORTHO05D001479 7.8e-12 73.2 73 54.8
MD16G1158400 Malus domestica HOM05D001581 ORTHO05D001479 1.7e-11 72.0 72 54.2
Nitab4.5_0000570g0370 Nicotiana tabacum HOM05D001581 ORTHO05D001479 1.7e-11 72.0 54 61.1
CiPaw.01G141600 Carya illinoinensis HOM05D001581 ORTHO05D001479 3.0e-11 71.2 74 50.0
Prupe.1G123200 Prunus persica HOM05D001581 ORTHO05D001479 3.0e-11 71.2 74 52.7
Nitab4.5_0003484g0100 Nicotiana tabacum HOM05D001581 ORTHO05D001479 5.1e-11 70.5 55 61.8
Manes.15G006400 Manihot esculenta HOM05D001581 ORTHO05D001479 6.6e-11 70.1 38 81.6
RcHm_v2.0_Chr4g0424361 Rosa chinensis HOM05D001581 ORTHO05D001479 6.6e-11 70.1 74 51.4
CiPaw.02G076400 Carya illinoinensis HOM05D001581 ORTHO05D001479 1.1e-10 69.3 37 81.1
Haze_01076 Corylus avellana HOM05D001581 ORTHO05D001479 1.5e-10 68.9 37 81.1
FvH4_4g19340 Fragaria vesca HOM05D001581 ORTHO05D001479 1.9e-10 68.6 38 73.7
FAN07G2509 Fragaria x ananassa HOM05D001581 ORTHO05D001479 1.9e-10 68.6 38 73.7
FAN12G0232 Fragaria x ananassa HOM05D001581 ORTHO05D001479 1.9e-10 68.6 38 73.7
QL06p011496 Quercus lobata HOM05D001581 ORTHO05D001479 3.3e-10 67.8 38 76.3
QL12p005383 Quercus lobata HOM05D001581 ORTHO05D001479 3.3e-10 67.8 38 76.3
Thecc.04G296200 Theobroma cacao HOM05D001581 ORTHO05D001479 4.3e-10 67.4 38 78.9
Actinidia40352 Actinidia chinensis HOM05D001581 ORTHO05D001479 5.6e-10 67.0 38 78.9
Dinv44312 Davidia involucrata HOM05D001581 ORTHO05D001479 5.6e-10 67.0 38 78.9
Duzib212G0234 Durio zibethinus HOM05D001581 ORTHO05D001479 5.6e-10 67.0 38 78.9
FAN12G3576 Fragaria x ananassa HOM05D001581 ORTHO05D001479 5.6e-10 67.0 38 71.1
Gohir.A10G170300 Gossypium hirsutum HOM05D001581 ORTHO05D001479 5.6e-10 67.0 38 78.9
Gohir.D10G177300 Gossypium hirsutum HOM05D001581 ORTHO05D001479 5.6e-10 67.0 38 78.9
Gorai.011G198100 Gossypium raimondii HOM05D001581 ORTHO05D001479 5.6e-10 67.0 38 78.9
Potri.010G141300 Populus trichocarpa HOM05D001581 ORTHO05D001479 5.6e-10 67.0 38 78.9
Sabra10G0109200 Salix brachista HOM05D001581 ORTHO05D001479 5.6e-10 67.0 38 78.9
arahy.Tifrunner.gnm1.ann1.T9D4U4 Arachis hypogaea HOM05D001581 ORTHO05D001479 7.3e-10 66.6 54 63.0
CSS0024205 Camellia sinensis var. sinensis HOM05D001581 ORTHO05D001479 7.3e-10 66.6 38 78.9
Sopen01g026400 Solanum pennellii HOM05D001581 ORTHO05D001479 7.3e-10 66.6 38 78.9
PGSC0003DMG400007552 Solanum tuberosum HOM05D001581 ORTHO05D001479 7.3e-10 66.6 38 78.9
Duzib151G1178 Durio zibethinus HOM05D001581 ORTHO05D001479 9.5e-10 66.2 38 78.9
SalBow8G0256 Salvia bowleyana HOM05D001581 ORTHO05D001479 1.2e-09 65.9 38 78.9
SalBow8G2119 Salvia bowleyana HOM05D001581 ORTHO05D001479 1.2e-09 65.9 38 78.9
MSTRG.3867 Avicennia marina HOM05D001581 ORTHO05D001479 1.6e-09 65.5 38 76.3
Lalb_Chr18g0058891 Lupinus albus HOM05D001581 ORTHO05D001479 1.6e-09 65.5 38 73.7
Lsat_1_v5_gn_6_19140 Lactuca sativa HOM05D001581 ORTHO05D001479 2.1e-09 65.1 38 76.3
Phvul.009G254200 Phaseolus vulgaris HOM05D001581 ORTHO05D001479 2.1e-09 65.1 38 73.7
Oeu019955.1 Olea europaea HOM05D001581 ORTHO05D001479 2.8e-09 64.7 38 76.3
Actinidia15587 Actinidia chinensis HOM05D001581 ORTHO05D001479 3.6e-09 64.3 37 78.4
HanXRQChr02g0049781 Helianthus annuus HOM05D001581 ORTHO05D001479 3.6e-09 64.3 38 76.3
Sabra08G0082000 Salix brachista HOM05D001581 ORTHO05D001479 3.6e-09 64.3 38 76.3
GSVIVG01035034001 Vitis vinifera HOM05D001581 ORTHO05D001479 3.6e-09 64.3 74 50.0
Dinv15200 Davidia involucrata HOM05D001581 ORTHO05D001479 4.7e-09 63.9 39 79.5
Hma1.2p1_0013F.1_g008870 Hydrangea macrophylla HOM05D001581 ORTHO05D001479 4.7e-09 63.9 38 76.3
Lj6g0022191 Lotus japonicus HOM05D001581 ORTHO05D001479 6.2e-09 63.5 38 71.1
Lalb_Chr20g0120961 Lupinus albus HOM05D001581 ORTHO05D001479 6.2e-09 63.5 38 71.1
Medtr2g034750 Medicago truncatula HOM05D001581 ORTHO05D001479 6.2e-09 63.5 38 71.1
Psat1g159920 Pisum sativum HOM05D001581 ORTHO05D001479 6.2e-09 63.5 38 71.1
TAR362G1265 Trochodendron aralioides HOM05D001581 ORTHO05D001479 6.2e-09 63.5 38 76.3
ECA233G1761 Erigeron canadensis HOM05D002444 ORTHO05D004748 8.1e-09 63.2 38 73.7
arahy.Tifrunner.gnm1.ann1.Z7UQGQ Arachis hypogaea HOM05D001581 ORTHO05D001479 1.1e-08 62.8 37 73.0
Glyma.07G242300 Glycine max HOM05D001581 ORTHO05D001479 1.1e-08 62.8 38 68.4
Cc03_g01090 Coffea canephora HOM05D001581 ORTHO05D001479 1.4e-08 62.4 39 74.4
COL.COLO4_34659 Corchorus olitorius HOM05D001581 ORTHO05D001479 1.4e-08 62.4 39 76.9
Potri.008G108201 Populus trichocarpa HOM05D001581 ORTHO05D001479 1.4e-08 62.4 38 73.7
Glyma.15G143800 Glycine max HOM05D001581 ORTHO05D001479 1.8e-08 62.0 38 68.4
TPR.G40120 Trifolium pratense HOM05D001581 ORTHO05D001479 1.8e-08 62.0 38 68.4
AUR62042955 Chenopodium quinoa HOM05D001581 ORTHO05D001479 4.0e-08 60.8 38 73.7
AUR62043775 Chenopodium quinoa HOM05D001581 ORTHO05D001479 4.0e-08 60.8 38 73.7
Atru.chr4.2970 Acer truncatum HOM05D001581 ORTHO05D001479 5.2e-08 60.5 38 71.1
Gohir.D09G063950 Gossypium hirsutum HOM05D001581 ORTHO05D001479 6.8e-08 60.1 38 71.1
Oeu016481.1 Olea europaea HOM05D001581 ORTHO05D001479 8.9e-08 59.7 74 44.6
CANSAT78G0149 Cannabis sativa HOM05D001581 ORTHO05D001479 1.2e-07 59.3 39 69.2
TWI09G1623 Tripterygium wilfordii HOM05D001581 ORTHO05D001479 1.2e-07 59.3 39 71.8
TWI73G1141 Tripterygium wilfordii HOM05D001581 ORTHO05D001479 1.2e-07 59.3 39 71.8
AUR62016138 Chenopodium quinoa HOM05D001581 ORTHO05D001479 1.5e-07 58.9 38 71.1
Hma1.2p1_0357F.1_g134130 Hydrangea macrophylla HOM05D001581 ORTHO05D001479 1.5e-07 58.9 48 60.4
EL10Ac3g05452 Beta vulgaris HOM05D001581 ORTHO05D001479 2.0e-07 58.5 38 68.4
Peaxi162Scf00065g00214 Petunia axillaris HOM05D001581 ORTHO05D001479 2.6e-07 58.2 38 68.4
DCAR_027016 Daucus carota HOM05D001581 ORTHO05D001479 3.4e-07 57.8 38 65.8
Migut.G00096 Erythranthe guttata HOM05D001581 ORTHO05D001479 4.4e-07 57.4 38 71.1
Sed0001632 Sechium edule HOM05D001581 ORTHO05D001479 4.4e-07 57.4 38 71.1
CsaV3_3G015060 Cucumis sativus L. HOM05D001581 ORTHO05D001479 5.8e-07 57.0 39 69.2
Hma1.2p1_0078F.1_g040130 Hydrangea macrophylla HOM05D001581 ORTHO05D001479 5.8e-07 57.0 39 71.8
PGR031G1314 Punica granatum HOM05D001581 ORTHO05D001479 5.8e-07 57.0 38 68.4
Hund03100 Selenicereus undatus HOM05D001581 ORTHO05D001479 7.6e-07 56.6 38 68.4
MELO3C021282.2 Cucumis melo HOM05D001581 ORTHO05D001479 9.9e-07 56.2 38 71.1
Sc25g0003430 Simmondsia chinensis HOM05D001581 ORTHO05D001479 9.9e-07 56.2 38 68.4
Hund05870 Selenicereus undatus HOM05D001581 ORTHO05D001479 1.3e-06 55.8 52 59.6
CsaV3_6G022500 Cucumis sativus L. HOM05D001581 ORTHO05D001479 1.7e-06 55.5 38 71.1
Glyma.09G038700 Glycine max HOM05D001581 ORTHO05D001479 1.7e-06 55.5 41 63.4
TAR633G0939 Trochodendron aralioides HOM05D001581 ORTHO05D001479 1.7e-06 55.5 38 68.4
Duzib052G0583 Durio zibethinus HOM05D001581 ORTHO05D001479 2.2e-06 55.1 39 66.7
ATR0618G282 Amborella trichopoda HOM05D001581 ORTHO05D001479 2.9e-06 54.7 38 65.8
ATR0807G109 Amborella trichopoda HOM05D001581 ORTHO05D001479 2.9e-06 54.7 38 65.8
Sed0016348 Sechium edule HOM05D001581 ORTHO05D001479 2.9e-06 54.7 39 64.1
Actinidia12296 Actinidia chinensis HOM05D001581 ORTHO05D001479 3.7e-06 54.3 38 68.4
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 3.7e-06 54.3 38 65.8
MELO3C012112.2 Cucumis melo HOM05D001581 ORTHO05D001479 3.7e-06 54.3 38 65.8
CsaV3_5G032910 Cucumis sativus L. HOM05D001581 ORTHO05D001479 3.7e-06 54.3 38 65.8
Nn4g25630 Nelumbo nucifera HOM05D001581 ORTHO05D001479 3.7e-06 54.3 38 63.2
Sed0009090 Sechium edule HOM05D001581 ORTHO05D001479 3.7e-06 54.3 38 65.8
CAN.G78.122 Capsicum annuum HOM05D001581 ORTHO05D001479 4.9e-06 53.9 38 65.8
Solyc01g095050.3 Solanum lycopersicum HOM05D001581 ORTHO05D001479 4.9e-06 53.9 38 65.8
Sopen01g038840 Solanum pennellii HOM05D001581 ORTHO05D001479 4.9e-06 53.9 38 65.8
PGSC0003DMG400000191 Solanum tuberosum HOM05D001581 ORTHO05D001479 4.9e-06 53.9 38 65.8
Ciclev10032906m.g Citrus clementina HOM05D001581 ORTHO05D001479 6.4e-06 53.5 38 65.8
Sed0017903 Sechium edule HOM05D001581 ORTHO05D001479 6.4e-06 53.5 39 64.1
THA.LOC104802598 Tarenaya hassleriana HOM05D001581 ORTHO05D001479 6.4e-06 53.5 38 63.2
Aqoxy2G02785 Aquilegia oxysepala HOM05D001581 ORTHO05D001479 8.4e-06 53.1 39 66.7
Manes.02G073200 Manihot esculenta HOM05D001581 ORTHO05D001479 8.4e-06 53.1 38 65.8
HPP92_001159 Vanilla planifolia HOM05D001581 ORTHO05D001479 8.4e-06 53.1 40 60.0


User provided reference genes

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