Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002434 Daucus carota HOM05D004069 ORTHO05D004699 1.2e-55 219.5 106 100.0
HanXRQChr13g0410171 Helianthus annuus HOM05D004069 ORTHO05D004699 1.1e-48 196.4 105 86.7
Cc03_g02560 Coffea canephora HOM05D004069 ORTHO05D004699 1.8e-48 195.7 106 86.8
ECA240G0933 Erigeron canadensis HOM05D004069 ORTHO05D004699 1.3e-46 189.5 105 82.9
Actinidia23443 Actinidia chinensis HOM05D004069 ORTHO05D004699 2.9e-46 188.3 104 83.7
CSS0012120 Camellia sinensis var. sinensis HOM05D004069 ORTHO05D004699 3.8e-46 188.0 104 82.7
HanXRQChr03g0079731 Helianthus annuus HOM05D004069 ORTHO05D004699 3.8e-46 188.0 105 81.9
Hma1.2p1_1671F.1_g296710 Hydrangea macrophylla HOM05D004069 ORTHO05D004699 3.8e-46 188.0 103 84.5
Lsat_1_v5_gn_5_49720 Lactuca sativa HOM05D004069 ORTHO05D004699 3.8e-46 188.0 105 81.9
Cfa015517 Carpinus fangiana HOM05D004069 ORTHO05D004699 1.1e-45 186.4 105 82.9
Hma1.2p1_0078F.1_g040910 Hydrangea macrophylla HOM05D004069 ORTHO05D004699 1.5e-45 186.0 103 83.5
GSVIVG01017834001 Vitis vinifera HOM05D004069 ORTHO05D004699 1.5e-45 186.0 105 81.9
Eucgr.H03663 Eucalyptus grandis HOM05D004069 ORTHO05D004699 5.5e-45 184.1 105 80.0
FAN07G2596 Fragaria x ananassa HOM05D004069 ORTHO05D004699 5.5e-45 184.1 105 81.0
FAN22G1255 Fragaria x ananassa HOM05D004069 ORTHO05D004699 5.5e-45 184.1 105 81.0
Prupe.1G144300 Prunus persica HOM05D004069 ORTHO05D004699 5.5e-45 184.1 105 82.9
Actinidia32378 Actinidia chinensis HOM05D004069 ORTHO05D004699 7.2e-45 183.7 104 79.8
Sed0000717 Sechium edule HOM05D004069 ORTHO05D004699 7.2e-45 183.7 105 80.0
Sc11g0003950 Simmondsia chinensis HOM05D004069 ORTHO05D004699 7.2e-45 183.7 105 81.0
CANSAT54G0205 Cannabis sativa HOM05D004069 ORTHO05D004699 9.5e-45 183.3 105 80.0
FvH4_4g16930 Fragaria vesca HOM05D004069 ORTHO05D004699 1.2e-44 183.0 105 80.0
FAN12G1790 Fragaria x ananassa HOM05D004069 ORTHO05D004699 1.2e-44 183.0 105 80.0
FAN12G4073 Fragaria x ananassa HOM05D004069 ORTHO05D004699 1.2e-44 183.0 105 80.0
FAN17G0096 Fragaria x ananassa HOM05D004069 ORTHO05D004699 1.2e-44 183.0 105 81.0
RcHm_v2.0_Chr4g0420511 Rosa chinensis HOM05D004069 ORTHO05D004699 1.2e-44 183.0 105 81.0
vmacro08226 Vaccinium macrocarpon HOM05D004069 ORTHO05D004699 1.2e-44 183.0 104 80.8
CiPaw.01G155300 Carya illinoinensis HOM05D004069 ORTHO05D004699 1.6e-44 182.6 105 79.0
Manes.15G019000 Manihot esculenta HOM05D004069 ORTHO05D004699 2.1e-44 182.2 105 78.1
MD10G1048000 Malus domestica HOM05D004069 ORTHO05D004699 2.8e-44 181.8 105 81.0
TAR362G0867 Trochodendron aralioides HOM05D004069 ORTHO05D004699 2.8e-44 181.8 105 80.0
TWI09G1514 Tripterygium wilfordii HOM05D004069 ORTHO05D004699 4.7e-44 181.0 105 78.1
Atru.chr4.2722 Acer truncatum HOM05D004069 ORTHO05D004699 6.1e-44 180.6 105 79.0
Nn4g26079 Nelumbo nucifera HOM05D004069 ORTHO05D004699 6.1e-44 180.6 104 77.9
CAN.G981.42 Capsicum annuum HOM05D004069 ORTHO05D004699 8.0e-44 180.3 104 79.8
CiPaw.02G087900 Carya illinoinensis HOM05D004069 ORTHO05D004699 8.0e-44 180.3 105 80.0
Nn3g21235 Nelumbo nucifera HOM05D004069 ORTHO05D004699 8.0e-44 180.3 104 77.9
Nitab4.5_0001714g0140 Nicotiana tabacum HOM05D004069 ORTHO05D004699 8.0e-44 180.3 104 79.8
Nitab4.5_0009882g0010 Nicotiana tabacum HOM05D004069 ORTHO05D004699 8.0e-44 180.3 104 79.8
TWI73G0788 Tripterygium wilfordii HOM05D004069 ORTHO05D004699 8.0e-44 180.3 105 78.1
Manes.03G189600 Manihot esculenta HOM05D004069 ORTHO05D004699 1.4e-43 179.5 105 78.1
Solyc08g080240.3 Solanum lycopersicum HOM05D004069 ORTHO05D004699 1.4e-43 179.5 104 78.8
Sopen08g028590 Solanum pennellii HOM05D004069 ORTHO05D004699 1.4e-43 179.5 104 78.8
Actinidia40204 Actinidia chinensis HOM05D004069 ORTHO05D004699 1.8e-43 179.1 104 78.8
CsaV3_1G037430 Cucumis sativus L. HOM05D004069 ORTHO05D004699 1.8e-43 179.1 105 78.1
Aqoxy5G00598 Aquilegia oxysepala HOM05D004069 ORTHO05D004699 2.3e-43 178.7 103 77.7
Hund07638 Selenicereus undatus HOM05D004069 ORTHO05D004699 2.3e-43 178.7 105 79.0
Sed0022789 Sechium edule HOM05D004069 ORTHO05D004699 3.0e-43 178.3 106 76.4
Sc19g0004820 Simmondsia chinensis HOM05D004069 ORTHO05D004699 4.0e-43 177.9 104 78.8
Actinidia00062 Actinidia chinensis HOM05D004069 ORTHO05D004699 5.2e-43 177.6 104 76.9
Sabra10G0013600 Salix brachista HOM05D004069 ORTHO05D004699 5.2e-43 177.6 104 78.8
PGSC0003DMG400022739 Solanum tuberosum HOM05D004069 ORTHO05D004699 5.2e-43 177.6 103 78.6
Potri.008G196600 Populus trichocarpa HOM05D004069 ORTHO05D004699 6.8e-43 177.2 103 79.6
PGR031G1560 Punica granatum HOM05D004069 ORTHO05D004699 6.8e-43 177.2 106 78.3
Sabra08G0163600 Salix brachista HOM05D004069 ORTHO05D004699 6.8e-43 177.2 103 79.6
MD05G1041600 Malus domestica HOM05D004069 ORTHO05D004699 1.2e-42 176.4 105 79.0
Peaxi162Scf00620g00918 Petunia axillaris HOM05D004069 ORTHO05D004699 1.2e-42 176.4 104 77.9
THA.LOC104818836 Tarenaya hassleriana HOM05D004069 ORTHO05D004699 1.2e-42 176.4 105 77.1
vmacro15276 Vaccinium macrocarpon HOM05D004069 ORTHO05D004699 1.5e-42 176.0 107 76.6
MD13G1175600 Malus domestica HOM05D004069 ORTHO05D004699 2.0e-42 175.6 105 78.1
Oeu007709.1 Olea europaea HOM05D004069 ORTHO05D004699 2.0e-42 175.6 104 75.0
Potri.010G026000 Populus trichocarpa HOM05D004069 ORTHO05D004699 2.0e-42 175.6 104 77.9
Cpa.g.sc16.88 Carica papaya HOM05D004069 ORTHO05D004699 2.6e-42 175.3 105 76.2
Lj3g0025312 Lotus japonicus HOM05D004069 ORTHO05D004699 2.6e-42 175.3 105 77.1
AL6G30150 Arabidopsis lyrata HOM05D004069 ORTHO05D004699 5.7e-42 174.1 105 76.2
AT5G18800 Arabidopsis thaliana HOM05D004069 ORTHO05D004699 5.7e-42 174.1 105 76.2
Carub.0006s1710 Capsella rubella HOM05D004069 ORTHO05D004699 5.7e-42 174.1 105 76.2
AUR62022250 Chenopodium quinoa HOM05D004069 ORTHO05D004699 5.7e-42 174.1 96 80.2
Glyma.01G145000 Glycine max HOM05D004069 ORTHO05D004699 5.7e-42 174.1 105 76.2
Medtr8g035900 Medicago truncatula HOM05D004069 ORTHO05D004699 5.7e-42 174.1 105 76.2
PGR004G0388 Punica granatum HOM05D004069 ORTHO05D004699 5.7e-42 174.1 105 76.2
arahy.Tifrunner.gnm1.ann1.J8E67M Arachis hypogaea HOM05D004069 ORTHO05D004699 7.5e-42 173.7 105 76.2
BcaB01g05275 Brassica carinata HOM05D004069 ORTHO05D004699 7.5e-42 173.7 105 76.2
BcaC03g13618 Brassica carinata HOM05D004069 ORTHO05D004699 7.5e-42 173.7 105 76.2
A03p09140 Brassica napus HOM05D004069 ORTHO05D004699 7.5e-42 173.7 105 76.2
A10p20810 Brassica napus HOM05D004069 ORTHO05D004699 7.5e-42 173.7 105 76.2
C03p10670 Brassica napus HOM05D004069 ORTHO05D004699 7.5e-42 173.7 105 76.2
BolC2t06916H Brassica oleracea HOM05D004069 ORTHO05D004699 7.5e-42 173.7 105 76.2
BolC3t13543H Brassica oleracea HOM05D004069 ORTHO05D004699 7.5e-42 173.7 105 76.2
BraA03t10237Z Brassica rapa HOM05D004069 ORTHO05D004699 7.5e-42 173.7 105 76.2
BraA10t44146Z Brassica rapa HOM05D004069 ORTHO05D004699 7.5e-42 173.7 105 76.2
QL06p006731 Quercus lobata HOM05D004069 ORTHO05D004699 7.5e-42 173.7 104 76.0
Psat4g149640 Pisum sativum HOM05D004069 ORTHO05D004699 9.8e-42 173.3 104 76.9
Eucgr.B01248 Eucalyptus grandis HOM05D004069 ORTHO05D004699 1.3e-41 172.9 106 75.5
arahy.Tifrunner.gnm1.ann1.EYX6XU Arachis hypogaea HOM05D004069 ORTHO05D004699 1.7e-41 172.6 105 75.2
CARHR194200 Cardamine hirsuta HOM05D004069 ORTHO05D004699 1.7e-41 172.6 105 75.2
Sp6g25590 Schrenkiella parvula HOM05D004069 ORTHO05D004699 1.7e-41 172.6 105 75.2
Aa31LG11G10890 Aethionema arabicum HOM05D004069 ORTHO05D004699 2.2e-41 172.2 105 75.2
BcaB08g36643 Brassica carinata HOM05D004069 ORTHO05D004699 2.2e-41 172.2 105 75.2
BcaC04g18646 Brassica carinata HOM05D004069 ORTHO05D004699 2.2e-41 172.2 105 74.3
BolC9t58640H Brassica oleracea HOM05D004069 ORTHO05D004699 2.2e-41 172.2 105 74.3
Thhalv10015085m.g Eutrema salsugineum HOM05D004069 ORTHO05D004699 2.2e-41 172.2 105 75.2
Glyma.03G021800 Glycine max HOM05D004069 ORTHO05D004699 2.2e-41 172.2 105 75.2
PGR031G3162 Punica granatum HOM05D004069 ORTHO05D004699 2.2e-41 172.2 106 75.5
BcaB01g04889 Brassica carinata HOM05D004069 ORTHO05D004699 2.8e-41 171.8 104 76.0
C09p57690 Brassica napus HOM05D004069 ORTHO05D004699 2.8e-41 171.8 105 74.3
CDE09G1375 Ceratophyllum demersum HOM05D004069 ORTHO05D004699 2.8e-41 171.8 105 74.3
Ciclev10006197m.g Citrus clementina HOM05D004069 ORTHO05D004699 2.8e-41 171.8 105 73.3
BraA02t05469Z Brassica rapa HOM05D004069 ORTHO05D004699 4.9e-41 171.0 105 74.3
VMungo0331G0279 Vigna mungo HOM05D004069 ORTHO05D004699 4.9e-41 171.0 105 74.3
Eucgr.B01240 Eucalyptus grandis HOM05D004069 ORTHO05D004699 6.3e-41 170.6 106 74.5
ATR0208G034 Amborella trichopoda HOM05D004069 ORTHO05D004699 8.3e-41 170.2 105 75.2
Ah.01g005950 Amaranthus hybridus HOM05D004069 ORTHO05D004699 1.4e-40 169.5 96 79.2
Rhsim02G0014600 Rhododendron simsii HOM05D004069 ORTHO05D004699 1.4e-40 169.5 106 74.5
TPR.G36608 Trifolium pratense HOM05D004069 ORTHO05D004699 1.4e-40 169.5 103 74.8
EL10Ac9g21174 Beta vulgaris HOM05D004069 ORTHO05D004699 1.8e-40 169.1 96 78.1
MD16G1177400 Malus domestica HOM05D004069 ORTHO05D004699 1.8e-40 169.1 105 75.2
Migut.F02022 Erythranthe guttata HOM05D004069 ORTHO05D004699 3.1e-40 168.3 106 72.6
Hund24899 Selenicereus undatus HOM05D004069 ORTHO05D004699 3.1e-40 168.3 105 74.3
unitig_46.g18583 Utricularia gibba HOM05D004069 ORTHO05D004699 3.1e-40 168.3 106 72.6
Sp3g05220 Schrenkiella parvula HOM05D004069 ORTHO05D004699 4.1e-40 167.9 104 73.1
VMungo0331G0995 Vigna mungo HOM05D004069 ORTHO05D004699 4.1e-40 167.9 105 72.4
AT3G06310 Arabidopsis thaliana HOM05D004069 ORTHO05D004699 5.4e-40 167.5 103 73.8
PSO832G3814 Papaver somniferum HOM05D004069 ORTHO05D004699 5.4e-40 167.5 104 74.0
unitig_37.g12295 Utricularia gibba HOM05D004069 ORTHO05D004699 5.4e-40 167.5 107 72.0
Carub.0003s0574 Capsella rubella HOM05D004069 ORTHO05D004699 7.0e-40 167.2 103 72.8
PSO210G4490 Papaver somniferum HOM05D004069 ORTHO05D004699 9.2e-40 166.8 104 73.1
THA.LOC104827125 Tarenaya hassleriana HOM05D004069 ORTHO05D004699 9.2e-40 166.8 105 73.3
MSTRG.9205 Avicennia marina HOM05D004069 ORTHO05D004699 1.2e-39 166.4 106 70.8
Thhalv10021810m.g Eutrema salsugineum HOM05D004069 ORTHO05D004699 2.0e-39 165.6 103 72.8
Os03g0295500 Oryza sativa ssp. japonica HOM05D004069 ORTHO05D004699 2.0e-39 165.6 104 71.2
Lalb_Chr07g0189611 Lupinus albus HOM05D004069 ORTHO05D004699 2.7e-39 165.2 103 69.9
Zm00001eb396890 Zea mays HOM05D004069 ORTHO05D004699 3.5e-39 164.9 104 72.1
Aqoxy2G03156 Aquilegia oxysepala HOM05D004069 ORTHO05D004699 4.5e-39 164.5 104 70.2
AL3G17240 Arabidopsis lyrata HOM05D004069 ORTHO05D004699 4.5e-39 164.5 103 71.8
Phvul.010G048500 Phaseolus vulgaris HOM05D004069 ORTHO05D004699 4.5e-39 164.5 105 70.5
Lalb_Chr13g0291661 Lupinus albus HOM05D004069 ORTHO05D004699 5.9e-39 164.1 103 70.9
A02p05100 Brassica napus HOM05D000415 ORTHO05D002707 7.8e-39 163.7 101 75.2
C02p10150 Brassica napus HOM05D000415 ORTHO05D002707 7.8e-39 163.7 101 75.2
CARHR080830 Cardamine hirsuta HOM05D004069 ORTHO05D004699 7.8e-39 163.7 103 70.9
Duzib212G0467 Durio zibethinus HOM05D004069 ORTHO05D004699 7.8e-39 163.7 105 69.5
HanXRQChr03g0080011 Helianthus annuus HOM05D004069 ORTHO05D004699 1.7e-38 162.5 87 82.8
Hma1.2p1_0643F.1_g194630 Hydrangea macrophylla HOM05D004069 ORTHO05D004699 1.7e-38 162.5 108 73.1
Gohir.A09G232800 Gossypium hirsutum HOM05D004069 ORTHO05D004699 6.6e-38 160.6 105 68.6
Thecc.04G274500 Theobroma cacao HOM05D004069 ORTHO05D004699 6.6e-38 160.6 105 68.6
Gohir.D09G233900 Gossypium hirsutum HOM05D004069 ORTHO05D004699 1.1e-37 159.8 105 68.6
Zm00001eb013640 Zea mays HOM05D004069 ORTHO05D004699 1.1e-37 159.8 110 68.2
Duzib151G0641 Durio zibethinus HOM05D004069 ORTHO05D004699 1.9e-37 159.1 105 67.6
Gorai.006G256800 Gossypium raimondii HOM05D004069 ORTHO05D004699 1.9e-37 159.1 105 67.6
HPP92_001127 Vanilla planifolia HOM05D004069 ORTHO05D004699 2.5e-37 158.7 103 68.9
Gohir.D10G164800 Gossypium hirsutum HOM05D004069 ORTHO05D004699 4.3e-37 157.9 105 66.7
Gorai.011G184000 Gossypium raimondii HOM05D004069 ORTHO05D004699 4.3e-37 157.9 105 66.7
Duzib052G0156 Durio zibethinus HOM05D004069 ORTHO05D004699 5.6e-37 157.5 105 66.7
Rhsim04G0214300 Rhododendron simsii HOM05D004069 ORTHO05D004699 9.5e-37 156.8 167 50.9
Gohir.A10G103600 Gossypium hirsutum HOM05D004069 ORTHO05D004699 3.6e-36 154.8 105 65.7
TAR633G1540 Trochodendron aralioides HOM05D004069 ORTHO05D004699 4.7e-36 154.5 87 77.0
SEGI_25177 Sequoiadendron giganteum HOM05D004069 ORTHO05D004699 1.4e-35 152.9 106 67.0
Haze_01035 Corylus avellana HOM05D004069 ORTHO05D004699 1.1e-32 143.3 82 82.9
Lsat_1_v5_gn_5_51221 Lactuca sativa HOM05D004069 ORTHO05D004699 2.4e-32 142.1 73 83.6
Pp3c10_17050 Physcomitrium patens HOM05D004069 ORTHO05D004699 3.5e-31 138.3 107 65.4
CBR_g31386 Chara braunii HOM05D004069 ORTHO05D004699 5.0e-30 134.4 101 63.4
Pp3c4_6220 Physcomitrium patens HOM05D004069 ORTHO05D004699 5.0e-30 134.4 100 64.0
Mapoly0119s0025 Marchantia polymorpha HOM05D004069 ORTHO05D004699 1.1e-29 133.3 96 61.5
Pp3c3_33480 Physcomitrium patens HOM05D004069 ORTHO05D004699 1.1e-29 133.3 103 63.1
Dinv44442 Davidia involucrata HOM05D004069 ORTHO05D004699 1.9e-29 132.5 69 81.2
CDE02G1037 Ceratophyllum demersum HOM05D003181 ORTHO05D003689 9.5e-29 130.2 82 72.0
THA.LOC104802732 Tarenaya hassleriana HOM05D004069 ORTHO05D004699 8.0e-28 127.1 80 72.5
Dinv38340 Davidia involucrata HOM05D004069 ORTHO05D004699 3.1e-27 125.2 62 87.1
SMO146G0136 Selaginella moellendorffii HOM05D004069 ORTHO05D004699 1.5e-26 122.9 95 54.7
CSS0016731 Camellia sinensis var. sinensis HOM05D004069 ORTHO05D004699 1.2e-23 113.2 73 72.6
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 2.3e-22 109.0 94 59.6
ClCG03G006350 Citrullus lanatus HOM05D004069 ORTHO05D004699 1.5e-21 106.3 67 74.6
PGSC0003DMG400012496 Solanum tuberosum HOM05D004069 ORTHO05D004699 5.6e-21 104.4 71 66.2
MELO3C035505.2 Cucumis melo HOM05D004069 ORTHO05D004699 2.1e-20 102.4 63 77.8
MCO10G196 Micromonas commoda HOM05D004069 ORTHO05D004699 3.6e-20 101.7 93 47.3
CANSAT54G1967 Cannabis sativa HOM05D004069 ORTHO05D004699 1.4e-19 99.8 59 83.1
Ca_23836_v3 Cicer arietinum L. HOM05D004069 ORTHO05D004699 3.1e-19 98.6 63 76.2
AUR62031965 Chenopodium quinoa HOM05D004069 ORTHO05D004699 6.8e-19 97.4 54 83.3
HanXRQChr05g0152631 Helianthus annuus HOM05D001685 ORTHO05D007488 6.8e-19 97.4 60 76.7
Lsat_1_v5_gn_5_162901 Lactuca sativa HOM05D004069 ORTHO05D004699 9.8e-18 93.6 63 71.4
SGA_v2.0_scaffold122G33247 Striga asiatica HOM05D002362 ORTHO05D002465 1.9e-16 89.4 55 76.4
Solyc08g007805.1 Solanum lycopersicum HOM05D004069 ORTHO05D004699 2.4e-16 89.0 106 47.2
Ah.01g017190 Amaranthus hybridus HOM05D004069 ORTHO05D004699 1.6e-15 86.3 51 80.4
Ah.01g017180 Amaranthus hybridus HOM05D004069 ORTHO05D004699 1.5e-13 79.7 53 60.4
PRCOL_00002240 Prasinoderma coloniale HOM05D004069 ORTHO05D004699 2.5e-13 79.0 90 37.8
MBI18_g15803_MAGBIO Magnolia biondii HOM05D004069 ORTHO05D004699 7.3e-13 77.4 41 75.6
VMungo0720G1128 Vigna mungo HOM05D004069 ORTHO05D004699 8.1e-12 73.9 65 58.5
VMungo0251G3681 Vigna mungo HOM05D039118 ORTHO05D004699 1.2e-10 70.1 45 68.9
ClCG06G005540 Citrullus lanatus HOM05D004069 ORTHO05D004699 2.3e-06 55.8 35 77.1


User provided reference genes

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