Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002416 Daucus carota HOM05D004860 ORTHO05D006366 3.8e-44 181.0 86 100.0
Phvul.003G093000 Phaseolus vulgaris HOM05D004860 ORTHO05D006366 4.7e-26 120.9 86 68.6
Lalb_Chr07g0177321 Lupinus albus HOM05D004860 ORTHO05D006366 8.0e-26 120.2 86 67.4
MSTRG.24756 Avicennia marina HOM05D004860 ORTHO05D006366 1.0e-25 119.8 86 66.3
Glyma.17G017300 Glycine max HOM05D004860 ORTHO05D006366 1.0e-25 119.8 86 68.6
Medtr4g117310 Medicago truncatula HOM05D004860 ORTHO05D006366 1.0e-25 119.8 86 68.6
VMungo1215G0712 Vigna mungo HOM05D004860 ORTHO05D006366 1.0e-25 119.8 86 68.6
Lj4g0005512 Lotus japonicus HOM05D004860 ORTHO05D006366 1.8e-25 119.0 86 67.4
Solyc01g080140.3 Solanum lycopersicum HOM05D004860 ORTHO05D006366 1.8e-25 119.0 86 66.3
Sopen01g031920 Solanum pennellii HOM05D004860 ORTHO05D006366 1.8e-25 119.0 86 66.3
Glyma.07G256800 Glycine max HOM05D004860 ORTHO05D006366 2.3e-25 118.6 86 67.4
Psat4g031440 Pisum sativum HOM05D004860 ORTHO05D006366 2.3e-25 118.6 86 67.4
TPR.G20138 Trifolium pratense HOM05D004860 ORTHO05D006366 2.3e-25 118.6 86 67.4
Ca_21591_v3 Cicer arietinum L. HOM05D004860 ORTHO05D006366 3.0e-25 118.2 86 66.3
Actinidia12990 Actinidia chinensis HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 65.1
AL6G30430 Arabidopsis lyrata HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 67.4
AT5G19050 Arabidopsis thaliana HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 67.4
BcaB08g36622 Brassica carinata HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 67.4
BcaC04g18624 Brassica carinata HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 67.4
A10p20640 Brassica napus HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 67.4
C09p57430 Brassica napus HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 67.4
BolC9t58612H Brassica oleracea HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 67.4
BraA10t44127Z Brassica rapa HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 67.4
CARHR193940 Cardamine hirsuta HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 67.4
Thhalv10013904m.g Eutrema salsugineum HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 67.4
SalBow5G4413 Salvia bowleyana HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 65.1
Sp6g25330 Schrenkiella parvula HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 67.4
Thecc.04G221400 Theobroma cacao HOM05D004860 ORTHO05D006366 4.0e-25 117.9 86 66.3
Actinidia40192 Actinidia chinensis HOM05D004860 ORTHO05D006366 5.2e-25 117.5 86 65.1
Aa31LG11G10670 Aethionema arabicum HOM05D004860 ORTHO05D006366 5.2e-25 117.5 86 67.4
CSS0038220 Camellia sinensis var. sinensis HOM05D004860 ORTHO05D006366 5.2e-25 117.5 86 66.3
Cpa.g.sc16.26 Carica papaya HOM05D004860 ORTHO05D006366 6.7e-25 117.1 86 64.0
Duzib268G1873 Durio zibethinus HOM05D004860 ORTHO05D006366 6.7e-25 117.1 86 66.3
Carub.0006s1737 Capsella rubella HOM05D004860 ORTHO05D006366 1.2e-24 116.3 86 66.3
Gohir.A05G316600 Gossypium hirsutum HOM05D004860 ORTHO05D006366 1.5e-24 115.9 86 64.0
Gohir.D05G318100 Gossypium hirsutum HOM05D004860 ORTHO05D006366 1.5e-24 115.9 86 65.1
Gorai.009G340700 Gossypium raimondii HOM05D004860 ORTHO05D006366 1.5e-24 115.9 86 65.1
COL.COLO4_21645 Corchorus olitorius HOM05D004860 ORTHO05D006366 2.0e-24 115.5 86 65.1
Duzib212G0960 Durio zibethinus HOM05D004860 ORTHO05D006366 2.6e-24 115.2 86 65.1
QL06p004255 Quercus lobata HOM05D004860 ORTHO05D006366 2.6e-24 115.2 84 65.5
Oeu029304.1 Olea europaea HOM05D004860 ORTHO05D006366 3.3e-24 114.8 86 65.1
THA.LOC104818790 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 3.3e-24 114.8 86 65.1
EL10Ac3g06352 Beta vulgaris HOM05D004860 ORTHO05D006366 4.4e-24 114.4 86 62.8
CiPaw.02G092200 Carya illinoinensis HOM05D004860 ORTHO05D006366 4.4e-24 114.4 86 64.0
SalBow5G0733 Salvia bowleyana HOM05D004860 ORTHO05D006366 4.4e-24 114.4 86 62.8
Atru.chr4.2574 Acer truncatum HOM05D004860 ORTHO05D006366 5.7e-24 114.0 86 64.0
Ah.07g203980 Amaranthus hybridus HOM05D004860 ORTHO05D006366 5.7e-24 114.0 86 62.8
BcaB01g04878 Brassica carinata HOM05D004860 ORTHO05D006366 5.7e-24 114.0 86 64.0
BcaB01g05289 Brassica carinata HOM05D004860 ORTHO05D006366 5.7e-24 114.0 86 64.0
BolC3t13554H Brassica oleracea HOM05D004860 ORTHO05D006366 5.7e-24 114.0 86 64.0
BraA03t10247Z Brassica rapa HOM05D004860 ORTHO05D006366 5.7e-24 114.0 86 64.0
CANSAT78G2493 Cannabis sativa HOM05D004860 ORTHO05D006366 5.7e-24 114.0 86 61.6
Haze_00965 Corylus avellana HOM05D004860 ORTHO05D006366 5.7e-24 114.0 86 62.8
Manes.15G022900 Manihot esculenta HOM05D004860 ORTHO05D006366 5.7e-24 114.0 86 64.0
PGR031G2771 Punica granatum HOM05D004860 ORTHO05D006366 5.7e-24 114.0 86 62.8
Prupe.1G151200 Prunus persica HOM05D004860 ORTHO05D006366 9.7e-24 113.2 84 64.3
Zm00001eb303280 Zea mays HOM05D004860 ORTHO05D006366 9.7e-24 113.2 86 61.6
Cc03_g03100 Coffea canephora HOM05D004860 ORTHO05D006366 1.3e-23 112.8 86 62.8
Ah.13g074180 Amaranthus hybridus HOM05D004860 ORTHO05D006366 1.7e-23 112.5 86 62.8
arahy.Tifrunner.gnm1.ann1.K193BP Arachis hypogaea HOM05D004860 ORTHO05D006366 2.8e-23 111.7 86 64.0
arahy.Tifrunner.gnm1.ann1.PDW3QZ Arachis hypogaea HOM05D004860 ORTHO05D006366 2.8e-23 111.7 86 64.0
MELO3C006570.2 Cucumis melo HOM05D004860 ORTHO05D006366 2.8e-23 111.7 84 60.7
Os07g0211800 Oryza sativa ssp. japonica HOM05D004860 ORTHO05D006366 2.8e-23 111.7 86 60.5
Potri.008G202300 Populus trichocarpa HOM05D004860 ORTHO05D006366 2.8e-23 111.7 86 60.5
Sabra08G0159200 Salix brachista HOM05D004860 ORTHO05D006366 2.8e-23 111.7 86 60.5
CiPaw.01G159800 Carya illinoinensis HOM05D004860 ORTHO05D006366 3.7e-23 111.3 86 61.6
AUR62030079 Chenopodium quinoa HOM05D004860 ORTHO05D006366 3.7e-23 111.3 86 62.8
ECA240G4413 Erigeron canadensis HOM05D004860 ORTHO05D006366 3.7e-23 111.3 86 62.8
Migut.N00151 Erythranthe guttata HOM05D004860 ORTHO05D006366 3.7e-23 111.3 86 61.6
Sed0000368 Sechium edule HOM05D004860 ORTHO05D006366 3.7e-23 111.3 84 61.9
THA.LOC104822311 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 3.7e-23 111.3 86 62.8
AUR62038223 Chenopodium quinoa HOM05D004860 ORTHO05D006366 4.8e-23 110.9 86 62.8
Ciclev10005293m.g Citrus clementina HOM05D004860 ORTHO05D006366 4.8e-23 110.9 86 62.8
Lj3C761T9 Lonicera japonica HOM05D004860 ORTHO05D006366 4.8e-23 110.9 86 61.6
MD16G1183500 Malus domestica HOM05D004860 ORTHO05D006366 4.8e-23 110.9 84 61.9
Nitab4.5_0001247g0010 Nicotiana tabacum HOM05D004860 ORTHO05D006366 4.8e-23 110.9 86 62.8
unitig_8.g2879 Utricularia gibba HOM05D004860 ORTHO05D006366 4.8e-23 110.9 86 61.6
Cfa015580 Carpinus fangiana HOM05D004860 ORTHO05D006366 6.3e-23 110.5 86 60.5
TAR636G2819 Trochodendron aralioides HOM05D004860 ORTHO05D006366 6.3e-23 110.5 86 61.6
Cc02_g31730 Coffea canephora HOM05D004860 ORTHO05D006366 8.3e-23 110.2 86 60.5
FAN22G2324 Fragaria x ananassa HOM05D004860 ORTHO05D006366 8.3e-23 110.2 86 60.5
HanXRQChr09g0248101 Helianthus annuus HOM05D004860 ORTHO05D006366 8.3e-23 110.2 86 61.6
MD13G1182900 Malus domestica HOM05D004860 ORTHO05D006366 8.3e-23 110.2 84 61.9
Nn4g26191 Nelumbo nucifera HOM05D004860 ORTHO05D006366 8.3e-23 110.2 86 60.5
TWI73G0632 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 8.3e-23 110.2 86 62.8
Aqoxy2G03261 Aquilegia oxysepala HOM05D004860 ORTHO05D006366 1.1e-22 109.8 86 60.5
CsaV3_3G013760 Cucumis sativus L. HOM05D004860 ORTHO05D006366 1.1e-22 109.8 84 59.5
FAN17G0307 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.1e-22 109.8 86 60.5
PSO407G0112 Papaver somniferum HOM05D004860 ORTHO05D006366 1.1e-22 109.8 84 60.7
SEGI_28969 Sequoiadendron giganteum HOM05D004860 ORTHO05D006366 1.1e-22 109.8 84 63.1
FAN07G1456 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.4e-22 109.4 86 60.5
FAN12G3962 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.4e-22 109.4 86 60.5
MBI17_g12009_MAGBIO Magnolia biondii HOM05D004860 ORTHO05D006366 1.4e-22 109.4 86 59.3
RcHm_v2.0_Chr4g0418381 Rosa chinensis HOM05D004860 ORTHO05D006366 1.4e-22 109.4 86 60.5
GSVIVG01017886001 Vitis vinifera HOM05D004860 ORTHO05D006366 1.4e-22 109.4 86 61.6
Oeu017197.2 Olea europaea HOM05D004860 ORTHO05D006366 1.8e-22 109.0 86 62.8
Hund12197 Selenicereus undatus HOM05D004860 ORTHO05D000105 1.8e-22 109.0 86 60.5
PSO170G1688 Papaver somniferum HOM05D004860 ORTHO05D006366 2.4e-22 108.6 84 60.7
TAR365G0160 Trochodendron aralioides HOM05D004860 ORTHO05D006366 2.4e-22 108.6 86 60.5
ClCG05G005460 Citrullus lanatus HOM05D004860 ORTHO05D006366 3.1e-22 108.2 84 58.3
FvH4_4g14470 Fragaria vesca HOM05D004860 ORTHO05D006366 7.0e-22 107.1 86 59.3
CDE02G3435 Ceratophyllum demersum HOM05D004860 ORTHO05D006366 9.1e-22 106.7 86 57.0
Eucgr.D02658 Eucalyptus grandis HOM05D004860 ORTHO05D006366 9.1e-22 106.7 86 58.1
Mapoly0095s0018 Marchantia polymorpha HOM05D004860 ORTHO05D006366 2.0e-21 105.5 86 57.0
Eucgr.B01143 Eucalyptus grandis HOM05D004860 ORTHO05D006366 2.7e-21 105.1 86 57.0
Dinv38393 Davidia involucrata HOM05D001530 ORTHO05D004168 1.7e-20 102.4 79 65.8
AagrBONN_evm.TU.Sc2ySwM_117.2400 Anthoceros agrestis HOM05D004860 ORTHO05D006366 2.2e-20 102.1 85 57.6
Peaxi162Scf01766g00011 Petunia axillaris HOM05D004860 ORTHO05D006366 1.9e-19 99.0 84 57.1
Actinidia23474 Actinidia chinensis HOM05D004860 ORTHO05D006366 2.5e-19 98.6 85 57.6
Migut.G00288 Erythranthe guttata HOM05D004860 ORTHO05D006366 2.5e-19 98.6 86 55.8
Hund22791 Selenicereus undatus HOM05D004860 ORTHO05D006366 2.5e-19 98.6 86 57.0
Lj6C565T4 Lonicera japonica HOM05D004860 ORTHO05D006366 4.2e-19 97.8 49 87.8
CAN.G183.30 Capsicum annuum HOM05D004860 ORTHO05D006366 5.5e-19 97.4 63 71.4
Lsat_1_v5_gn_7_67361 Lactuca sativa HOM05D004860 ORTHO05D006366 2.1e-18 95.5 89 53.9
Pp3c4_4720 Physcomitrium patens HOM05D004860 ORTHO05D006366 3.6e-18 94.7 86 53.5
C03p10800 Brassica napus HOM05D004860 ORTHO05D006366 1.8e-17 92.4 78 59.0
DCAR_030597 Daucus carota HOM05D004860 ORTHO05D006366 6.8e-17 90.5 49 85.7
SalBow2G3077 Salvia bowleyana HOM05D004860 ORTHO05D006366 1.5e-16 89.4 86 52.3
Cc00_g00380 Coffea canephora HOM05D004860 ORTHO05D006366 2.8e-15 85.1 50 76.0
A03p09270 Brassica napus HOM05D004860 ORTHO05D006366 2.0e-13 79.0 69 59.4
SMO119G0283 Selaginella moellendorffii HOM05D004860 ORTHO05D006366 1.3e-12 76.3 86 46.5
Cc11_g00440 Coffea canephora HOM05D004860 ORTHO05D005444 7.2e-11 70.5 40 75.0
Cc01_g03740 Coffea canephora HOM05D004860 ORTHO05D006366 3.0e-09 65.1 84 44.0
Cc09_g08330 Coffea canephora HOM05D004860 ORTHO05D006366 3.0e-09 65.1 86 45.3
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 1.1e-06 56.6 39 64.1
Cc04_g14790 Coffea canephora HOM05D004860 ORTHO05D006366 5.4e-06 54.3 29 72.4


User provided reference genes

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