Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 0.0e+00 1540.8 1001 100.0
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 1.2e-24 119.8 529 26.3
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 4.6e-24 117.9 242 37.6
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 3.3e-22 111.7 1013 23.5
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 2.8e-21 108.6 481 28.1
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 2.4e-20 105.5 534 28.5
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 2.9e-18 98.6 434 26.3
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 8.4e-18 97.1 481 26.0
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 2.4e-17 95.5 180 37.8
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.2e-16 93.2 551 27.0
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 2.1e-16 92.4 567 25.9
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 2.7e-16 92.0 134 44.0
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 2.3e-15 89.0 540 24.1
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 8.7e-15 87.0 363 27.0
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 1.1e-14 86.7 483 25.1
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 7.4e-14 84.0 399 26.3
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.3e-13 83.2 265 30.9
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 1.6e-13 82.8 581 25.0
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 2.8e-13 82.0 247 28.7
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 2.8e-13 82.0 426 27.2
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 4.8e-13 81.3 576 25.2
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 4.8e-13 81.3 212 37.3
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 8.1e-13 80.5 580 25.3
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 1.4e-12 79.7 545 25.3
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 4.0e-12 78.2 476 24.2
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 6.9e-12 77.4 244 28.7
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 9.0e-12 77.0 575 24.7
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 2.6e-11 75.5 215 30.2
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 7.6e-11 73.9 375 25.3
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 1.0e-10 73.6 309 27.5
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 1.0e-10 73.6 553 23.3
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 1.7e-10 72.8 301 27.9
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.7e-10 72.8 534 25.8
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 2.2e-10 72.4 205 30.7
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 8.4e-10 70.5 300 28.3
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 8.4e-10 70.5 501 24.2
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 1.1e-09 70.1 172 33.1
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 1.9e-09 69.3 222 31.1
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 3.2e-09 68.6 551 25.0
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 1.2e-08 66.6 215 30.7
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 2.7e-08 65.5 550 23.1
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 6.0e-08 64.3 308 27.6
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 6.0e-08 64.3 460 25.4
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 7.9e-08 63.9 336 24.7
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 1.3e-07 63.2 98 42.9
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 1.8e-07 62.8 84 45.2
Rhsim04G0196200 Rhododendron simsii HOM05D008144 ORTHO05D010081 1.8e-07 62.8 330 26.4
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 5.1e-07 61.2 318 26.4
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 6.7e-07 60.8 210 31.4
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 5.7e-06 57.8 294 26.5


User provided reference genes

Program Settings