Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002292 Daucus carota HOM05D002165 ORTHO05D001531 1.6e-39 165.6 82 100.0
DCAR_001887 Daucus carota HOM05D002165 ORTHO05D001531 1.7e-38 162.2 82 97.6
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 2.6e-18 95.1 82 61.0
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 2.9e-17 91.7 80 58.8
DCAR_001886 Daucus carota HOM05D002165 ORTHO05D001531 4.9e-17 90.9 80 58.8
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 2.5e-16 88.6 80 56.2
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 9.3e-16 86.7 83 51.8
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 7.9e-15 83.6 82 51.2
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 3.0e-14 81.6 69 55.1
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 3.0e-14 81.6 69 55.1
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 3.0e-14 81.6 69 55.1
ECA240G1387 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.1e-13 79.7 83 54.2
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 1.5e-13 79.3 86 50.0
ECA240G0021 Erigeron canadensis HOM05D002165 ORTHO05D001531 9.6e-13 76.6 83 53.0
ECA240G3359 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.6e-12 75.9 82 50.0
Lsat_1_v5_gn_7_63540 Lactuca sativa HOM05D002165 ORTHO05D001531 1.6e-12 75.9 83 50.6
Lsat_1_v5_gn_7_63581 Lactuca sativa HOM05D002165 ORTHO05D001531 4.8e-12 74.3 82 52.4
Nitab4.5_0003573g0050 Nicotiana tabacum HOM05D002165 ORTHO05D001531 4.8e-12 74.3 72 50.0
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 8.2e-12 73.6 73 47.9
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 8.2e-12 73.6 73 47.9
Lsat_1_v5_gn_7_63880 Lactuca sativa HOM05D002165 ORTHO05D001531 8.2e-12 73.6 80 48.8
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.1e-11 73.2 73 49.3
ECA240G3242 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.4e-11 72.8 83 49.4
Nitab4.5_0005662g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 4.0e-11 71.2 74 45.9
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 5.3e-11 70.9 75 45.3
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 6.9e-11 70.5 73 47.9
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 6.9e-11 70.5 73 47.9
Nitab4.5_0002516g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 9.0e-11 70.1 74 45.9
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 9.0e-11 70.1 72 44.4
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 9.0e-11 70.1 72 44.4
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 2.0e-10 68.9 84 45.2
ECA236G1383 Erigeron canadensis HOM05D002165 ORTHO05D001531 2.0e-10 68.9 82 41.5
Lsat_1_v5_gn_9_85041 Lactuca sativa HOM05D002165 ORTHO05D001531 4.5e-10 67.8 82 40.2
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 1.3e-09 66.2 68 55.9
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 1.3e-09 66.2 68 55.9
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 1.3e-09 66.2 68 55.9
CAN.G1248.15 Capsicum annuum HOM05D002165 ORTHO05D001531 1.3e-09 66.2 69 42.0
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 2.9e-09 65.1 74 47.3
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 3.8e-09 64.7 68 54.4
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 3.8e-09 64.7 68 54.4
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 3.8e-09 64.7 68 54.4
Lsat_1_v5_gn_7_63620 Lactuca sativa HOM05D002165 ORTHO05D001531 3.8e-09 64.7 78 47.4
Lsat_1_v5_gn_9_84961 Lactuca sativa HOM05D002165 ORTHO05D001531 3.8e-09 64.7 82 41.5
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 3.8e-09 64.7 88 48.9
ECA240G0866 Erigeron canadensis HOM05D002165 ORTHO05D001531 6.5e-09 63.9 82 46.3
Oeu061905.1 Olea europaea HOM05D002165 ORTHO05D001531 6.5e-09 63.9 77 42.9
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 6.5e-09 63.9 73 42.5
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 6.5e-09 63.9 68 48.5
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 8.4e-09 63.5 72 56.9
Dinv24517 Davidia involucrata HOM05D002165 ORTHO05D001531 1.1e-08 63.2 57 59.6
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 1.1e-08 63.2 72 54.2
Lsat_1_v5_gn_9_85080 Lactuca sativa HOM05D002165 ORTHO05D001531 1.4e-08 62.8 71 46.5
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 2.5e-08 62.0 67 49.3
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 2.5e-08 62.0 86 43.0
Sp3g04720 Schrenkiella parvula HOM05D002165 ORTHO05D001531 2.5e-08 62.0 68 51.5
Dinv30951 Davidia involucrata HOM05D002165 ORTHO05D001531 3.2e-08 61.6 74 47.3
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 4.2e-08 61.2 78 46.2
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 4.2e-08 61.2 74 45.9
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 4.2e-08 61.2 70 45.7
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 7.1e-08 60.5 70 47.1
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 9.3e-08 60.1 69 52.2
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.2e-07 59.7 70 54.3
Dinv30952 Davidia involucrata HOM05D002165 ORTHO05D001531 1.2e-07 59.7 59 52.5
ECA236G2737 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.2e-07 59.7 80 38.8
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 1.2e-07 59.7 73 46.6
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 1.6e-07 59.3 76 46.1
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.1e-07 58.9 70 50.0
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.1e-07 58.9 70 50.0
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 2.1e-07 58.9 82 41.5
Thecc.09G084900 Theobroma cacao HOM05D002165 ORTHO05D001531 2.1e-07 58.9 81 49.4
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 2.7e-07 58.5 78 46.2
PSO761G0534 Papaver somniferum HOM05D002165 ORTHO05D001531 2.7e-07 58.5 72 47.2
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 2.7e-07 58.5 82 43.9
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 3.5e-07 58.2 68 44.1
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 3.5e-07 58.2 68 48.5
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 3.5e-07 58.2 82 41.5
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 4.6e-07 57.8 83 38.6
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 4.6e-07 57.8 83 39.8
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 6.1e-07 57.4 68 42.6
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 6.1e-07 57.4 69 46.4
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 6.1e-07 57.4 70 51.4
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 6.1e-07 57.4 76 43.4
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.1e-07 57.4 70 48.6
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.1e-07 57.4 70 48.6
Duzib128G1662 Durio zibethinus HOM05D002165 ORTHO05D001531 7.9e-07 57.0 82 46.3
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 7.9e-07 57.0 82 42.7
QL03p011025 Quercus lobata HOM05D016210 ORTHO05D001531 7.9e-07 57.0 72 37.5
QL03p011084 Quercus lobata HOM05D016210 ORTHO05D001531 7.9e-07 57.0 72 40.3
PGSC0003DMG400018282 Solanum tuberosum HOM05D002165 ORTHO05D001531 7.9e-07 57.0 72 38.9
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 1.0e-06 56.6 70 42.9
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 1.0e-06 56.6 70 42.9
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.0e-06 56.6 81 43.2
COL.COLO4_05484 Corchorus olitorius HOM05D002165 ORTHO05D001531 1.3e-06 56.2 85 50.6
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.3e-06 56.2 83 39.8
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 1.8e-06 55.8 68 47.1
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 1.8e-06 55.8 68 47.1
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 1.8e-06 55.8 68 47.1
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 1.8e-06 55.8 68 44.1
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.8e-06 55.8 70 48.6
Manes.09G181400 Manihot esculenta HOM05D002165 ORTHO05D001531 1.8e-06 55.8 72 48.6
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 2.3e-06 55.5 69 50.7
BcaC05g30083 Brassica carinata HOM05D002165 ORTHO05D001531 2.3e-06 55.5 68 51.5
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 2.3e-06 55.5 68 47.1
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 2.3e-06 55.5 68 47.1
C05p61420 Brassica napus HOM05D002165 ORTHO05D001531 2.3e-06 55.5 68 51.5
BolC5t34800H Brassica oleracea HOM05D002165 ORTHO05D001531 2.3e-06 55.5 68 51.5
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 2.3e-06 55.5 68 47.1
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 3.0e-06 55.1 82 43.9
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 3.0e-06 55.1 68 45.6
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 3.0e-06 55.1 68 48.5
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 3.0e-06 55.1 73 47.9
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 3.0e-06 55.1 82 40.2
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 3.0e-06 55.1 82 40.2
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 3.0e-06 55.1 82 40.2
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 3.0e-06 55.1 71 47.9
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 3.9e-06 54.7 68 45.6
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 3.9e-06 54.7 68 45.6
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 3.9e-06 54.7 68 45.6
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 3.9e-06 54.7 68 45.6
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 3.9e-06 54.7 68 45.6
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.9e-06 54.7 70 47.1
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 3.9e-06 54.7 81 39.5
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 3.9e-06 54.7 81 39.5
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 3.9e-06 54.7 69 47.8
Nn4g25284 Nelumbo nucifera HOM05D002165 ORTHO05D001531 3.9e-06 54.7 70 47.1
BcaC05g29776 Brassica carinata HOM05D002165 ORTHO05D001531 5.1e-06 54.3 68 50.0
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 5.1e-06 54.3 67 43.3
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.1e-06 54.3 70 47.1
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 6.7e-06 53.9 70 44.3
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 6.7e-06 53.9 82 42.7
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 6.7e-06 53.9 68 45.6
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 6.7e-06 53.9 68 45.6
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 6.7e-06 53.9 68 45.6
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 6.7e-06 53.9 68 45.6
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 6.7e-06 53.9 68 45.6
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.7e-06 53.9 84 46.4
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.7e-06 53.9 68 44.1
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 6.7e-06 53.9 82 40.2
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 6.7e-06 53.9 82 40.2
A05p42200 Brassica napus HOM05D002165 ORTHO05D001531 8.7e-06 53.5 68 50.0
BraA05t22939Z Brassica rapa HOM05D002165 ORTHO05D001531 8.7e-06 53.5 68 50.0
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 8.7e-06 53.5 82 36.6


User provided reference genes

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