Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 1.3e-145 519.6 244 100.0
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 1.0e-94 350.5 216 74.5
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 1.1e-91 340.5 205 76.6
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 3.4e-90 335.5 213 71.4
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 4.5e-90 335.1 207 72.9
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.7e-89 333.2 228 70.2
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.9e-89 332.4 242 66.5
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 4.9e-89 331.6 223 68.6
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 8.4e-89 330.9 206 72.3
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 8.4e-89 330.9 219 69.4
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.4e-88 330.1 206 73.3
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 4.2e-88 328.6 244 63.5
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 4.6e-87 325.1 218 69.3
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 1.0e-86 323.9 211 69.2
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 5.1e-86 321.6 242 64.0
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 8.7e-86 320.9 213 68.1
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 2.5e-85 319.3 237 63.7
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 5.7e-85 318.2 224 65.6
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 3.7e-84 315.5 240 62.9
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.1e-83 313.9 206 69.9
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 4.1e-83 312.0 208 67.3
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 9.0e-83 310.8 241 63.1
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 5.9e-82 308.1 226 63.7
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 8.5e-81 304.3 221 66.1
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.7e-79 299.3 220 63.6
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 6.1e-79 298.1 206 67.0
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 1.8e-78 296.6 229 62.0
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.8e-78 296.6 236 61.0
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 2.3e-78 296.2 206 64.1
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.3e-76 290.4 205 64.4
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 1.3e-76 290.4 200 64.5
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.7e-76 290.0 225 60.4
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 1.8e-75 286.6 230 57.4
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 3.4e-74 282.3 243 57.6
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 7.7e-74 281.2 207 59.9
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 1.3e-73 280.4 204 60.8
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 2.2e-73 279.6 235 54.5
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 1.1e-72 277.3 210 60.5
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 1.4e-72 276.9 202 62.4
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.4e-72 276.9 226 58.0
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 5.5e-72 275.0 233 54.9
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 4.7e-71 271.9 170 72.9
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 5.7e-69 265.0 224 55.8
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 1.2e-66 257.3 205 59.0
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 3.4e-66 255.8 248 52.8
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 5.9e-66 255.0 207 58.5
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.3e-57 227.3 176 55.7
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 2.2e-52 209.9 138 73.9
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 3.7e-52 209.1 143 66.4
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 7.0e-51 204.9 124 76.6
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 9.1e-51 204.5 122 69.7
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 2.7e-50 203.0 208 50.5
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 5.9e-50 201.8 126 66.7
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.7e-49 200.3 126 66.7
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 5.0e-49 198.7 175 55.4
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 3.0e-46 189.5 265 37.0
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 2.6e-45 186.4 124 59.7
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 2.6e-45 186.4 124 59.7
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 3.4e-45 186.0 112 69.6
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 4.8e-44 182.2 109 69.7
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 5.4e-43 178.7 222 39.6
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 7.0e-43 178.3 103 68.9
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 1.0e-41 174.5 123 58.5
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 1.0e-41 174.5 106 70.8
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 1.7e-41 173.7 106 69.8
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 4.7e-39 165.6 115 67.8
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 2.3e-38 163.3 98 71.4
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.8e-35 153.7 164 43.9
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.8e-35 153.7 98 68.4
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 2.7e-34 149.8 199 39.2
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 1.0e-33 147.9 108 58.3
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 1.3e-33 147.5 103 61.2
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 8.6e-33 144.8 86 68.6
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 1.5e-32 144.1 127 59.1
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 1.7e-28 130.6 105 66.7
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 4.9e-28 129.0 197 35.5
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 4.1e-27 125.9 215 33.0
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.2e-26 124.4 192 38.5
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 5.2e-22 109.0 199 34.2
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 5.2e-22 109.0 194 33.5
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 6.8e-22 108.6 73 58.9
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 1.7e-20 104.0 220 31.8
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 3.2e-19 99.8 126 41.3
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 2.8e-15 86.7 63 68.3
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 5.8e-13 79.0 44 84.1
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 7.5e-13 78.6 123 41.5
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 1.3e-12 77.8 87 54.0
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 6.0e-10 68.9 88 56.8
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.3e-09 67.8 49 67.3
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 3.9e-09 66.2 61 59.0
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 2.5e-08 63.5 85 54.1
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 1.2e-07 61.2 59 54.2
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 3.6e-07 59.7 78 52.6
HPP92_022683 Vanilla planifolia HOM05D007543 ORTHO05D009555 1.8e-06 57.4 154 33.1
FAN12G3210 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.1e-06 56.6 37 67.6
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 4.0e-06 56.2 75 48.0


User provided reference genes

Program Settings