Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002187 Daucus carota HOM05D007367 ORTHO05D008866 4.4e-50 201.1 106 100.0
Gohir.D12G204000 Gossypium hirsutum HOM05D007367 ORTHO05D008866 8.6e-30 133.7 99 71.7
Gorai.008G218800 Gossypium raimondii HOM05D007367 ORTHO05D008866 8.6e-30 133.7 99 71.7
GSVIVG01036886001 Vitis vinifera HOM05D007367 ORTHO05D008866 8.6e-30 133.7 93 75.3
Gohir.A12G201200 Gossypium hirsutum HOM05D007367 ORTHO05D008866 7.3e-29 130.6 99 70.7
Thecc.03G320300 Theobroma cacao HOM05D007367 ORTHO05D008866 2.8e-28 128.6 93 72.0
COL.COLO4_16748 Corchorus olitorius HOM05D007367 ORTHO05D008866 4.7e-28 127.9 93 68.8
Duzib068G0439 Durio zibethinus HOM05D007367 ORTHO05D008866 6.2e-28 127.5 93 72.0
Actinidia32792 Actinidia chinensis HOM05D007367 ORTHO05D008866 4.0e-27 124.8 105 63.8
Cc08_g05930 Coffea canephora HOM05D007367 ORTHO05D008866 4.0e-27 124.8 106 67.9
Sc07g0008020 Simmondsia chinensis HOM05D007367 ORTHO05D008866 5.2e-27 124.4 106 63.2
Dinv37431 Davidia involucrata HOM05D007367 ORTHO05D008866 1.5e-26 122.9 104 66.3
ClCG07G011120 Citrullus lanatus HOM05D007367 ORTHO05D008866 2.0e-26 122.5 106 65.1
CiPaw.11G074200 Carya illinoinensis HOM05D007367 ORTHO05D008866 3.4e-26 121.7 112 63.4
MELO3C016218.2 Cucumis melo HOM05D007367 ORTHO05D008866 3.4e-26 121.7 106 63.2
Ciclev10012881m.g Citrus clementina HOM05D007367 ORTHO05D008866 4.4e-26 121.3 97 67.0
Solyc12g096170.2 Solanum lycopersicum HOM05D007367 ORTHO05D008866 7.5e-26 120.6 105 61.9
Sopen12g032050 Solanum pennellii HOM05D007367 ORTHO05D008866 7.5e-26 120.6 105 61.9
PGSC0003DMG400029288 Solanum tuberosum HOM05D007367 ORTHO05D008866 1.3e-25 119.8 105 61.0
Potri.004G235300 Populus trichocarpa HOM05D007367 ORTHO05D008866 1.7e-25 119.4 95 67.4
Lsat_1_v5_gn_5_43721 Lactuca sativa HOM05D007367 ORTHO05D008866 2.2e-25 119.0 105 61.9
Prupe.5G013300 Prunus persica HOM05D007367 ORTHO05D008866 2.2e-25 119.0 94 64.9
MD03G1130300 Malus domestica HOM05D007367 ORTHO05D008866 3.7e-25 118.2 94 63.8
Cfa012305 Carpinus fangiana HOM05D007367 ORTHO05D008866 8.3e-25 117.1 94 68.1
CsaV3_4G007130 Cucumis sativus L. HOM05D007367 ORTHO05D008866 8.3e-25 117.1 106 60.4
CANSAT01G1692 Cannabis sativa HOM05D007367 ORTHO05D008866 1.1e-24 116.7 107 60.7
vmacro00097 Vaccinium macrocarpon HOM05D007367 ORTHO05D008866 1.1e-24 116.7 105 61.0
THA.LOC104811080 Tarenaya hassleriana HOM05D007367 ORTHO05D008866 1.9e-24 115.9 106 62.3
TAR374G1177 Trochodendron aralioides HOM05D007367 ORTHO05D008866 1.9e-24 115.9 105 58.1
ECA246G3716 Erigeron canadensis HOM05D007367 ORTHO05D008866 2.4e-24 115.5 94 59.6
Nn1g01985 Nelumbo nucifera HOM05D007367 ORTHO05D008866 5.4e-24 114.4 105 60.0
Manes.10G067900 Manihot esculenta HOM05D007367 ORTHO05D008866 7.0e-24 114.0 105 64.8
TWI38G2056 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 7.0e-24 114.0 93 66.7
Aa31LG6G1950 Aethionema arabicum HOM05D007367 ORTHO05D008866 2.7e-23 112.1 106 60.4
EL10Ac8g19394 Beta vulgaris HOM05D007367 ORTHO05D008866 2.7e-23 112.1 105 57.1
Sed0007825 Sechium edule HOM05D007367 ORTHO05D008866 2.7e-23 112.1 106 58.5
HanXRQChr02g0034081 Helianthus annuus HOM05D007367 ORTHO05D008866 6.0e-23 110.9 92 64.1
CDE02G0575 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 7.8e-23 110.5 101 55.4
QL12p003620 Quercus lobata HOM05D007367 ORTHO05D008866 7.8e-23 110.5 94 62.8
QL93p0143_0020 Quercus lobata HOM05D007367 ORTHO05D008866 7.8e-23 110.5 94 62.8
FAN08G2564 Fragaria x ananassa HOM05D007367 ORTHO05D008866 1.0e-22 110.2 94 59.6
RcHm_v2.0_Chr7g0215331 Rosa chinensis HOM05D007367 ORTHO05D008866 1.0e-22 110.2 103 57.3
SalBow4G0967 Salvia bowleyana HOM05D007367 ORTHO05D008866 1.0e-22 110.2 101 58.4
TWI38G0281 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 1.3e-22 109.8 105 61.0
FvH4_5g25140 Fragaria vesca HOM05D007367 ORTHO05D008866 1.7e-22 109.4 94 59.6
CAN.G947.33 Capsicum annuum HOM05D007367 ORTHO05D008866 3.9e-22 108.2 104 53.8
FAN13G0070 Fragaria x ananassa HOM05D007367 ORTHO05D008866 5.0e-22 107.8 94 58.5
CARHR226150 Cardamine hirsuta HOM05D007367 ORTHO05D008866 1.5e-21 106.3 106 57.5
Glyma.16G123600 Glycine max HOM05D007367 ORTHO05D008866 2.5e-21 105.5 94 59.6
Sp7g17960 Schrenkiella parvula HOM05D007367 ORTHO05D008866 2.5e-21 105.5 100 57.0
Glyma.02G045600 Glycine max HOM05D007367 ORTHO05D008866 4.3e-21 104.8 94 59.6
Lj4g0011102 Lotus japonicus HOM05D007367 ORTHO05D008866 4.3e-21 104.8 114 53.5
SGA_v2.0_scaffold89G27372 Striga asiatica HOM05D007367 ORTHO05D008866 7.3e-21 104.0 105 55.2
VMungo0251G1728 Vigna mungo HOM05D007367 ORTHO05D008866 7.3e-21 104.0 94 58.5
PGR042G2818 Punica granatum HOM05D007367 ORTHO05D008866 1.2e-20 103.2 103 58.3
Carub.0007s2188 Capsella rubella HOM05D007367 ORTHO05D008866 2.1e-20 102.4 106 55.7
AT4G19350 Arabidopsis thaliana HOM05D007367 ORTHO05D008866 3.6e-20 101.7 106 54.7
Migut.A00520 Erythranthe guttata HOM05D007367 ORTHO05D008866 3.6e-20 101.7 97 57.7
AL7G34810 Arabidopsis lyrata HOM05D007367 ORTHO05D008866 4.7e-20 101.3 106 54.7
Medtr8g075140 Medicago truncatula HOM05D007367 ORTHO05D008866 8.1e-20 100.5 94 55.3
Phvul.003G266000 Phaseolus vulgaris HOM05D007367 ORTHO05D008866 1.1e-19 100.1 94 57.4
Aqoxy7G01946 Aquilegia oxysepala HOM05D000773 ORTHO05D008866 1.4e-19 99.8 93 55.9
Peaxi162Scf00876g00431 Petunia axillaris HOM05D007367 ORTHO05D008866 1.8e-19 99.4 108 55.6
arahy.Tifrunner.gnm1.ann1.H9MF1T Arachis hypogaea HOM05D007367 ORTHO05D008866 5.2e-19 97.8 91 54.9
Lalb_Chr16g0391641 Lupinus albus HOM05D007367 ORTHO05D008866 6.8e-19 97.4 106 55.7
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 2.0e-18 95.9 93 59.1
TPR.G19504 Trifolium pratense HOM05D007367 ORTHO05D008866 4.4e-18 94.7 93 54.8
unitig_748.g8147 Utricularia gibba HOM05D007367 ORTHO05D008866 4.4e-18 94.7 101 52.5
Os08g0162500 Oryza sativa ssp. japonica HOM05D007367 ORTHO05D008866 1.3e-17 93.2 96 52.1
Atru.chr8.2637 Acer truncatum HOM05D007367 ORTHO05D008866 1.4e-16 89.7 91 56.0
Ah.09g231810 Amaranthus hybridus HOM05D007367 ORTHO05D008866 1.9e-16 89.4 105 52.4
C01p13270 Brassica napus HOM05D007367 ORTHO05D008866 1.9e-16 89.4 99 51.5
BcaC09g51422 Brassica carinata HOM05D007367 ORTHO05D008866 3.2e-16 88.6 104 50.0
BcaNung01789 Brassica carinata HOM05D007367 ORTHO05D008866 3.2e-16 88.6 104 50.0
MSTRG.25748 Avicennia marina HOM05D007367 ORTHO05D008866 4.1e-16 88.2 101 52.5
FAN04G0859 Fragaria x ananassa HOM05D007367 ORTHO05D008866 5.4e-16 87.8 81 55.6
FAN18G1407 Fragaria x ananassa HOM05D007367 ORTHO05D008866 7.1e-16 87.4 81 55.6
PSO063G4690 Papaver somniferum HOM05D007367 ORTHO05D008866 7.1e-16 87.4 93 52.7
PSO675G5685 Papaver somniferum HOM05D007367 ORTHO05D008866 7.1e-16 87.4 93 52.7
Thecc.04G178000 Theobroma cacao HOM05D000090 ORTHO05D001322 7.1e-16 87.4 59 72.9
Psat4g102200 Pisum sativum HOM05D007367 ORTHO05D008866 9.2e-16 87.0 91 49.5
BolC1t01302H Brassica oleracea HOM05D007367 ORTHO05D008866 2.1e-15 85.9 104 48.1
A01p11220 Brassica napus HOM05D007367 ORTHO05D008866 3.5e-15 85.1 104 49.0
BraA01t01068Z Brassica rapa HOM05D007367 ORTHO05D008866 3.5e-15 85.1 104 49.0
arahy.Tifrunner.gnm1.ann1.I4PABW Arachis hypogaea HOM05D007367 ORTHO05D008866 2.3e-14 82.4 122 41.8
Nitab4.5_0011129g0040 Nicotiana tabacum HOM05D007367 ORTHO05D008866 6.6e-14 80.9 73 53.4
CDE11G0580 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 1.1e-13 80.1 63 58.7
Zm00001eb415480 Zea mays HOM05D007367 ORTHO05D008866 1.1e-13 80.1 96 43.8
HPP92_022724 Vanilla planifolia HOM05D007367 ORTHO05D008866 4.3e-13 78.2 95 43.2
Hund14309 Selenicereus undatus HOM05D007367 ORTHO05D008866 2.9e-09 65.5 125 39.2
AUR62030407 Chenopodium quinoa HOM05D007367 ORTHO05D008866 8.4e-09 63.9 105 40.0
Oeu046774.1 Olea europaea HOM05D007367 ORTHO05D008866 3.2e-08 62.0 63 61.9
Gohir.A08G148800 Gossypium hirsutum HOM05D036757 ORTHO05D048069 3.0e-06 55.5 94 43.6


User provided reference genes

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